New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	4496128 =	NA (NA)	58 (1.030)	56/538	0.1	100%	intergenic (‑2037/‑83)	LY180_21445/LY180_21450	hypothetical protein/hypothetical protein
	?	CP006584	4565632 =	0 (0.000)					intergenic (‑372/+82)	LY180_21775/LY180_21780	hypothetical protein/lysine 2,3‑aminomutase

GGGTCGATAACAATAATGCCTTTCTCGCCCTCAACGAACGTAATGTTAGAGATATCCTGGCCGCGCACCTGATACATTTTAT‑CGGTGACTTTGAACAGGCCAGAAATACCGTTGATTTGCGACTGACGCCACAGGCTGGGGTTTACGGTTTCCGGCGCTGCGGCATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACTTGACTGTAAAA‑CTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAATCGA  >  CP006584/4495837‑4496395                                                                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                             gggTCGATAACAATAATGCCTTTCTCGCCCTCAACGAACGTAATGTTAGAGATATCCTGGCCGCGCACCTGATACATTTTAT‑CGGTGACTTTGAACAGGCCAGAAATACCGTTGATTTGCGACTGACGCCACAGGCTGGGGTTTACGGTTTCCGGCGCTGCGGCATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTaaaaa                                                                                                                                                                                                                                                                        >  1:615215/1‑298 (MQ=255)  ggTCGATAACAATAATGCCTTTCTCGCCCTCAACGAACGTAATGTTAGAGATATCCTGGCCGCGCACCTGATACATTTTAT‑CGGTGACTTTGAACAGGCCAGAAATACCGTTGATTTGCGACTGACGCCACAGGCTGGGGTTTACGGTTTCCGGCGCTGCGGCATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAAt                                                                                                                                                                                                                                                                       <  1:458089/298‑1 (MQ=255)    tCGATAACAATAATGCCTTTCTCGCCCTCAACGAACGTAATGTTAGAGATATCCTGGCCGCGCACCTGATACATTTTAT‑CGGTGACTTTGAACAGGCCAGAAATACCGTTGATTTGCGACTGACGCCACAGGCTGGGGTTTACGGTTTCCGGCGCTGCGGCATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCa                                                                                                                                                                                                                                                                     <  1:577576/298‑1 (MQ=255)        tAACAATAAGCCCTTTCTCGGCCTCAACGAACGTAAGGTTAGAGATATCCTGGCCGCGCACTTGTTACATTTTAC‑CGGTGATTTTGAACGGGCCAGAAATACCGTTGATTTGCGACTGACGCCACAGGCTGGGGTTTACGGTTTCCGGCGCTGCGGCATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCAttaa                                                                                                                                                                                                                                                                 <  2:39451/298‑1 (MQ=255)                agtccTGTCTCGACCTAAACAAACGTAGTGTTAGAGATATCCTTGGCGGGCACCGGATACATTTTAT‑CGGTGACTTTGAACAGGCCATAAATACCGTTGATTTGCGACTGACGACACAGTGTGGGGTTTACGGTTTCCGGCGCTGCGGCATTAATATCAAGTTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTCATGATTTTGGTAAAAATCATTAAGTTAAGGt                                                                                                                                                                                                                                                         <  2:274614/295‑1 (MQ=255)                    cTTTCTCGCCCTCAACGAACGTAATGTTAGAGATATCCTGGCCGCGCACCTGATACATTTTAT‑CGGTGACTTTGAACAGGCCAGAAATACCGTTGATTTGCGACTGACGCCACAGGCTGGGGTTTACGGTTTCCGGCGCTGCGGCATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGAt                                                                                                                                                                                                                                                     <  1:100811/298‑1 (MQ=255)                         tcGCCCTCAACGAACGTAATGTTAGATGTATACGGTCCTCGCACTCTATACATTTTAT‑CGGTGTGTTTGAACAGGCCATAAATACTGTTGATTTGCGACTGACGCCACAGGCTGGGGTGTACGGTTTCCGGCGCTGGGGCATTAATATCAAATTTGGAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATAcaca                                                                                                                                                                                                                                                <  2:386859/298‑1 (MQ=255)                              cTCAACGAACGTAATGTTAGAGATATCCTGGCCGCGCACCTGATACATTTTAT‑CGGTGACTTTGAACAGGCCAGAAATACCGTTGATTTGCGACTGACGCCACAGGCTGGGGTTTACGGTTTCCGGCGCTGCGGCATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTg                                                                                                                                                                                                                                           <  1:119331/298‑1 (MQ=255)                               tCAACGAACGTAATGTTCGAGATATCCTGGCCGCGCACCTGCTACATTCTAT‑CGGTGACTGTGAACAGGCCAGCAATACCGTTGATTTGCGACTGACGCCACAGGCTGGGGTTGCCGGTTTCCGGCGCGTCCGCATTCATATCACATTTGTAATCGTCAGCGCGGTAGTAAACTTTACCGTTCCCCTCACCCCACATACCTTCAACCATCAGCCCGGCGCTAAATCCCCGCTGGTCACTCAAGAATCCCCCAATGTTTTTGTTAACACCAAATAAGTTAAGTTgaaaccccaactttc                                                                                                                                                                                                                                          >  2:410789/1‑284 (MQ=255)                                 aacggacgGAATGTTAGTGATTTCCTGGACGGTCACCTGATA‑AGTGTATGCGGTGACTTTGACCAGGCGAGCAATACCGTTGGTGTGCGACTGAGGACACAGGCTGGGGTTTACGGTTTCCGGAGCTGCGGCATTAATATCGAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCa                                                                                                                                                                                                                                        <  2:644232/298‑1 (MQ=37)                                     aacgTAATGTTAGAGATATCCTGGCCGCGCACCTGATACATTTTAT‑CGGTGACTTTGAACAGGCCAGAAATACCGTTGATTTGCGACTGACGCCACAGGCTGGGGTTTACGGTTTCCGGCGCTGCGGTATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCAtta                                                                                                                                                                                                                                                                  <  2:208212/268‑1 (MQ=255)                                     aacgTAATGTTAGAGATATCCTGGCCGCGCACCTGATACATTTTAT‑CGGTGACTTTGAACAGGCCAGAAATACCGTTGATTTGCGACTGACGCCACAGGCTGGGGTTTACGGTTTCCGGCGCTGCGGTATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCAtta                                                                                                                                                                                                                                                                  >  1:208212/1‑268 (MQ=255)                                             gTTAGAGATATCCTGGCCGCGCACCTGATACATTTTAT‑CGGTGACTTTGAACAGGCCAGAAATACCGTTGATTTGCGACTGACGCCACAGGCTGGGGTTTACGGTTTCCGGCGCTGCGGCATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATg                                                                                                                                                                                                                            <  1:624096/298‑1 (MQ=255)                                                agggaTATCCTGGCCGCGGACCTGATACATTTTGT‑CGGTGACTTTGAACAGGCCAAAAATACCGTTGATTTGCGACTGACGCCACAGGCTGGGGTTTACGGTTTCCGGCTCTGCGGCATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGtt                                                                                                                                                                                                                         <  2:122936/295‑1 (MQ=255)                                                 gagaTATCCTGGCCGCGCACCTGATACATTTTAT‑CGGTGACTTTGAACAGGCCAGAAATACCGTTGATTTGCGACTGACGCCACAGGCTGGGGTTTACGGTTTCCGGCGCTGCGGCATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGttt                                                                                                                                                                                                                        >  1:320403/1‑298 (MQ=255)                                                               gcgcACCTGATACATTTTAT‑CGGTGACTTTGAACAGGCCAGAAATACCGTTGATTTGCGACTGACGCCACAGGCTGGGGTTTACGGTTTCCGGCGCTGCGGCATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCaat                                                                                                                                                                                                          <  1:541947/298‑1 (MQ=255)                                                                cgcACCTGATACATTTTAT‑CGGTTACTTTGAACAGGCCAGAAATACCGTTGATTTGCGACTGACGCCACAGGCTGGGGTTTACGGTTTCCGGCGCTGCGGCATTAATATCAAATTGGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCaata                                                                                                                                                                                                         <  1:238744/298‑1 (MQ=255)                                                                  cACCTTATACATTTTAT‑CGGTGACTTTGAACAGGCCAGAAATACCTTTGATTTGCGACTGACGCCACAGGCTGGGGTTTACGGTTTCCGGCGCTGCGGCATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCaataat                                                                                                                                                                                                       <  1:497519/298‑1 (MQ=255)                                                                    ccTGATACATTTTAT‑CGGTGACTTTGAACAGGCCAGAAATACCGTTGATTTGCGACTGACGCCACAGGCTGGGGTTTACGGTTTCCGGCGCTGCGGCATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCa                                                                                                                                                                                                     <  1:395912/298‑1 (MQ=255)                                                                            aTTTTTG‑CGGTGACTTTGGAAAGGCCAGAAATACCAGTGATGTGGGACTGACCGCACAGGCTTGGGTTTTCGGTTTCCGGCGCTGCGGCATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGAcaacaa                                                                                                                                                                                             <  2:37928/298‑1 (MQ=37)                                                                               ttAT‑CGGTGACTTTGAACAGGCCAGAAATACCGTTGATTTGCGACTGACGCCACAGGCTGGGGTTTACGGTTTCCGGCGCTGCGGCATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTACGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGAt                                                                                                                                                                                          <  1:29541/298‑1 (MQ=255)                                                                                     ggggatttttAACAGGCCAGAGTGACTTGTGATTCGCGACTGACGCCACGGGCTGGGGTTTGCGTGTTCCGGTGATGCTGCGTTATGGTCAAAGTCGTTATCGCGCGGGCGGTAGTAAACGTTACCGTTCGCATCTCGCAGAAGACCTTCAGCCAGCAGCGGATATATAAATCCACGCTGTGCACTGCTTAATCCCCTACTGTTTTTGGTCAAAAGCATTAAGTGAAGGTGGTTACATATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCg                                                                                                                                                                                     <  2:514779/292‑1 (MQ=12)                                                                                                   ggtgggAAATACCGTTGATGTGGGACGGACGCCAAGAGCTGGGGTTTAGGGTTTCCGGGGCTGCGGCATGAATATCAAATTTGTAGTCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCGGAATACCTTCATCCAGCAGCGGGACGATAAAACCACGCTGGGCACTGATTAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTa                                                                                                                                                                       <  2:493511/293‑1 (MQ=21)                                                                                                      cAGAAATACCGTTGATTTGCGACTGACGCCACAGGCTGGGGTTTACGGTTTCCGGCGCTGCGGCATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTacac                                                                                                                                                                    >  1:210097/1‑298 (MQ=255)                                                                                                              ccGTTGATTTGCGACTGACGCCACAGGCTGGGGTTTACGGTTTCCGGCGCTGCGGCATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGActctct                                                                                                                                                            <  1:342367/298‑1 (MQ=255)                                                                                                                        gCGACGGCCGACACAGGCTGGGGTTTACGGTTGCCGGCGCTGCGGAAGTAATATCAAATTTGTAATCGTCCGTGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTc                                                                                                                                                  <  2:156112/298‑1 (MQ=255)                                                                                                                         cGACTGACGCCACAGGCTGGGGTTTACGGTTTCCGGCGCTGCGGCATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCt                                                                                                                                                 <  1:268883/298‑1 (MQ=255)                                                                                                                              aggcccACGGGCTGTGGTTTCTGGTTTCCGGCGCTGCTGCATTAATATCAAATTTGTAAGCTTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGcccc                                                                                                                                            <  2:468218/294‑1 (MQ=255)                                                                                                                                  ccACAGGCTGGGGTTTACGGTTTCCGGCGCTGCGGCATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAGACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAAt                                                                                                                                        <  1:285935/298‑1 (MQ=255)                                                                                                                                               tttACGGTTTCCGGCGCTGCGGCATTAATATCAAATTTGTAATCGCCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGCCATATGATCAAATGGTTTCGCGAACAATCAATAATCAGACAACAAGATGTGCGACCTCGATCTTTTACACGACTCTCTTTACCACTTCTGCCCCGAATTACACTTAAAAca                                                                                                                           >  2:197090/1‑297 (MQ=255)                                                                                                                                                           ggCGCTGCGGCATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCtt                                                                                                               >  1:314743/1‑298 (MQ=255)                                                                                                                                                              gcTGCGGCATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAAc                                                                                                            <  1:132960/298‑1 (MQ=255)                                                                                                                                                                tGCGGCATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGt                                                                                                          >  1:29903/1‑298 (MQ=255)                                                                                                                                                                         aaTATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGcccc                                                                                                                                            <  1:496935/255‑1 (MQ=255)                                                                                                                                                                         aaTATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGcccc                                                                                                                                            >  2:496935/1‑255 (MQ=255)                                                                                                                                                                            atCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACg                                                                                              >  1:566958/1‑298 (MQ=255)                                                                                                                                                                                  ttggtaacggTCCGCTGGGTAGAAAACTTTACCGTTCGCATCACGCGGAATACCTTCATCCAGCAGCGTGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTAc                                                                                        <  2:615215/289‑1 (MQ=255)                                                                                                                                                                                    tgcaaTCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATAACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATTAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACtt                                                                                      <  1:378457/295‑1 (MQ=255)                                                                                                                                                                                          ctgccGCGAGTTAGTAAACTTTACCGTTCGCACCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACTTGACTGt                                                                                <  2:210097/295‑1 (MQ=255)                                                                                                                                                                                                       gtaAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTACTGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACCCAACATCTTAACGTTGGCTTGCCCCGCCTTACTTGACTTTAAAA‑CTCTCAccc                                                                  >  2:250944/1‑296 (MQ=255)                                                                                                                                                                                                           aCTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACTTGACTGTAAAA‑CTCTCACTCTTAc                                                              >  1:131969/1‑298 (MQ=255)                                                                                                                                                                                                              ttACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACTTGACTGTAAAA‑CTCTCACTCTTACCGa                                                           <  1:432297/298‑1 (MQ=255)                                                                                                                                                                                                                 gcGTTCGCATCACGCGAAAAACCTTCATCCCGCAGCGTGACAATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCTAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACCCTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACTTGACTGTAAAA‑CTCTCACTCTTACCGAACt                                                        <  2:512452/297‑1 (MQ=255)                                                                                                                                                                                                                    ttCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAACATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGCCTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGCCTCAACCGCTTAACGTTGGCTTGCCACGCCTTACTTAACTGAACAA‑CACTCCCTCTTACCGAACTTgg                                                     >  2:42255/1‑298 (MQ=17)                                                                                                                                                                                                                         aTCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCAc                                                                                               >  2:285836/1‑252 (MQ=255)                                                                                                                                                                                                                         aTCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCAc                                                                                               <  1:285836/252‑1 (MQ=255)                                                                                                                                                                                                                           cACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACTTGACTGTAAAA‑CTCTCACTCTTACCGAACTTGGCCGTAAc                                              <  1:150513/298‑1 (MQ=255)                                                                                                                                                                                                                                aGAAAACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGTACTTATGAATCCCCTAATGATTTTGGTAAAAATAATTAAGTTACGGTGGAGACACATATTGTAATATGATCAAATGGTGTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACTTGACTGTAAAA‑CTCTCACTCTTACCGAACTTGGCCGTAACCTGcc                                         <  2:566958/298‑1 (MQ=255)                                                                                                                                                                                                                                    tACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCACATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGCCTCTCTTTACCAATTCTGCCCCGAACTACACCTAAAAAGACTCAACAGCTTAACTTTGGCTTGCCAACCATTACTTACATGAAAAA‑CCCCCCCTCTTAACCAACCTGGCCgacacactccaaca                                     >  2:557386/1‑285 (MQ=14)                                                                                                                                                                                                                                        ttCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACTTGACTGTAAAA‑CTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAg                                 >  1:222227/1‑298 (MQ=255)                                                                                                                                                                                                                                           aTCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACTTGACTGTAAAA‑CTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCga                              >  2:364006/1‑298 (MQ=40)                                                                                                                                                                                                                                           aTCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACTTGACTGTAAAA‑CTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCga                              >  1:629046/1‑298 (MQ=40)                                                                                                                                                                                                                                                gcagcGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGCAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGAATCTCTTTACCAATTCTGCCCCGAATTACACTTAAACAGACTCCAAAGCATAACTTTGGCTTGCCCCGACTTACTTGAATGGAAAACCACCCAC‑CTTAACAACATGGGCCGCACCCTGCCCACCAAACCGAAAACa                         >  2:83810/1‑298 (MQ=11)                                                                                                                                                                                                                                                          gATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACTTGACTGTAAAA‑CTCTCACTCTTACCGAACTTGCCCGTAACCTGCCACCCAACACGAGAACAaaacaaaaca               >  2:239819/1‑298 (MQ=19)                                                                                                                                                                                                                                                                   aCGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACTTGACTGTAAAA‑CTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGAGAGAACAAAACATAACATCAAACGaa      >  1:395321/1‑298 (MQ=14)                                                                                                                                                                                                                                                                     gCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACTTGACTGTAAAA‑CTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAATc    >  1:26649/1‑298 (MQ=31)                                                                                                                                                                                                                                                                       tGGGCACTGAGTGATCGCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATTGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACACGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACTGGACTGTAAAA‑CTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAATCGa  <  2:642725/298‑1 (MQ=9)                                                                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                             GGGTCGATAACAATAATGCCTTTCTCGCCCTCAACGAACGTAATGTTAGAGATATCCTGGCCGCGCACCTGATACATTTTAT‑CGGTGACTTTGAACAGGCCAGAAATACCGTTGATTTGCGACTGACGCCACAGGCTGGGGTTTACGGTTTCCGGCGCTGCGGCATTAATATCAAATTTGTAATCGTCCGCGCGGTAGTAAACTTTACCGTTCGCATCACGCAGAATACCTTCATCCAGCAGCGGGGCGATAAATCCACGCTGGGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACTTGACTGTAAAA‑CTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAATCGA  >  CP006584/4495837‑4496395

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.