Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP006584 | 10,637 | C→A | G18G (GGC→GGA) | mogA → | molybdenum cofactor biosynthesis protein MogA |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP006584 | 10,637 | 0 | C | A | 98.3% | 189.1 / NA | 59 | G18G (GGC→GGA) | mogA | molybdenum cofactor biosynthesis protein MogA |
Reads supporting (aligned to +/- strand): ref base C (1/0); new base A (30/28); total (31/28) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
TCACTGAGTCCGAGTTCCTGTGGCAGCACAACCAGGATCCAATGGCAGTAGATAAACTGGCGGAAGGTATCCGTAAGTTTGCTATTGACCAGGAAAAACTGGAAAAAATGATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGCGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACGGGC‑GGAACTGGCCCGGCGCGTCGTGACGTA‑ACGCCCGATGCGACGCTGGCAGTAGCGGACCGCGAGATGCCTGGCTTTGGTGAACA‑GATGCGCCAGATAAGCCTGCATTTTGTACCAACTGCGA > CP006584/10342‑10926 | tcgcTGAGTCCGAGTTCCGGTGGCAGCAAAACGAGGATACAATGGCAGTAGATAAACTGGCGGAAGGGTGCCGTAAGTTTTCTATTGAGCAAGAAAAACTGGAAAAAATGTTCGGCGATC‑TGCTGTAATCTTTCTTAGCGTGACCGGGAAGTCGGGCACGCTACCTCTTCGGATGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTGAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGt < 2:374510/295‑1 (MQ=255) aactgccTGTGGCAGCACAACGAGGTTCCAATGGCAGTAGATAAACTGGCGGAAGGTATCCGTAAGTTTGCTATTGACCAGGAAAAACTGGAAAAAATGATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATa < 1:331886/293‑1 (MQ=255) ggATCCAATGGCAGTAGATAAACTGGCGGAAGGTATCCGTAAGTTTGCTATTGACCAGGAAAAACTGGAAAAAATGATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGAGAAAGGCATCCCTGCGCTGgaagaa > 1:460178/1‑298 (MQ=255) tCCAATGGCAGTAGATAAACTGGCGGAAGGTATCCGTAAGTTTGCTATTGACCAGGAAAAACTGGAAAAAATGATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATgg > 1:503002/1‑298 (MQ=255) aTGGCAGTAGATAAACTGGCGGAAGGTATCCGTAAGTTTGCTATTGACCAGGAAAAACTGGAAAAAATGATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGAAAAAGGCATCCCTGCGCTGGAAGAAgggaggg > 2:281445/1‑294 (MQ=255) tGGCAGGTGAGAAAAGGGGGGAAGGGAGCCGGAATTTTGCTATTGACCAGGAAAAAATGGAAAAAATGATGGGCCGTC‑TGCTGTAATCGTTATTAGCGTGACCGGGAAGTCGGTCCCGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGAc < 2:474990/298‑1 (MQ=255) cgatctAAACTGGCGGAAGGTATCCGTAAGTTTGCTATTGACCAGGAAAAACTGGAAAAAATGATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCTGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCgg < 1:275977/293‑1 (MQ=255) aaCTGGCGGAAGGTATCCGTAAGTTTGCTATTGACCAGGAAAAACTGGAAAAAATGATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGCAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTCAACGGCAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCTATTTCTGATCGCCCATCCCGCGGAGTTTATCAGACTAAATGGATACCTGCGCGGGAATAATGGCTGGCATCggaaggatg > 2:275977/1‑291 (MQ=255) aaCTGGCGGAAGGTATCCGTAAGTTTGCTATTGACCAGGAAAAACTGGAAAAAATGATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAAc > 1:230678/1‑298 (MQ=255) gAAGGTATCCGTAAGTTTGCTATTGACCAGGAAAAACTGGAAAAAATGATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGt < 1:373570/298‑1 (MQ=255) aGGTATCCGTAAGTTTGCTATTGACCAGGAAAAACTGGAAAAAATGATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGCTTAAACGGCAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTCCCATCTCTGATCGCGCATCCAGCGGAGTTTAACAGGAGAAAGGCCTCCCTGCGCTGGAAGAATGGCAGACCCTGGCGCTAACCCACCCGttt > 2:439929/1‑298 (MQ=255) tATCCGTAAGTTTGCTATTGACCAGGAAAAACTGGAAAAAATGATCGGCGATC‑TGCTGTAATCATTCTTAGCGGGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTTCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGaa < 2:299005/298‑1 (MQ=255) cGTAAGTTTGCTATTGACCAGGAAAAACTGGAAAAAATGATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTgg > 1:134670/1‑298 (MQ=255) gTAAGTTTGCTATTGACCAGGAAAAACTGGAAAAAATGATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGa < 1:654598/298‑1 (MQ=255) ttGCTATTGACCAGGAAAAACTGGAAAAAATGATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCg > 1:386111/1‑298 (MQ=255) gCTATTGACCAGGAAAAACTGGAAAAAATGATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCt < 1:198755/298‑1 (MQ=255) cTATTGACCAGGAAAAACTGGAAAAAATGATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCtt < 1:281445/298‑1 (MQ=255) aCCAGGAAAAACTGGAAAAAATGATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATccc < 1:393301/298‑1 (MQ=255) cAGGAAAAACTGGAAAAAATGATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCg > 1:422678/1‑298 (MQ=255) aGGAAAAACTGGAAAAAATGATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTCAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGa > 1:35486/1‑298 (MQ=255) aaaaaCTGGAAAAATTGATCGGC‑ATCTTGTCTTATTCATTTTATGCGGGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTTTCACTCCCTTCGCAGTGTATCATTCTGTTCAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGa < 2:35486/298‑1 (MQ=255) aCTGGAAAAAATGATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATTAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGATTAATCACCGATGAGCAg > 1:506759/1‑298 (MQ=255) tGGAAAAAATGATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCCTCCAGTGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTACCCCCGCCGTGTGACCTCGAAACCCGCTCAATCCCCGATGCGCAGGc > 2:24650/1‑298 (MQ=255) gAAAAAATGAGCGGGTATC‑TTCTGTAATCATTCGTAGAGGGACGGTGAAGGCTGTCACGCTACCGCTTCTGAAGCCTGTCTGTCACTCCCTTCGTCGTGTATCCTTGTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCAGCTCTGATCGCGCATCCAGCGGAGTTTAGCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGa < 2:441828/298‑1 (MQ=255) caaaattaagcGGCGATC‑TGCTGTGATGATTGTGAGGGTGACCGGGACGTTGGTAACGGTACCTATTCTGATGCCTGTCTGGTACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAGAATCTGGATGAATACTTTACGTATTGACTTAGTTGCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGat < 2:239639/288‑1 (MQ=255) aaaTGATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATACCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCACCGATGAGCAGGCGatcat > 1:538666/1‑298 (MQ=255) gATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATc > 2:490903/1‑234 (MQ=255) gATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATc < 1:490903/234‑1 (MQ=255) ggCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCaaa < 1:510208/298‑1 (MQ=255) cGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTg < 1:280001/298‑1 (MQ=255) gggAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGc < 2:230678/298‑1 (MQ=255) aGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGCGATTATCAGGATAACGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAAAGTTCTTTGGGCTTGTGGAGGAAATCGGTCGCCacc > 2:207391/1‑296 (MQ=255) ctgTCCCGCTCCCTCTTCTGAAGCGTGTCTGTTCCTCCCTTCGCAGTGTATTGTTCTTTTTAACGGGACGGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCAGCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTgg < 2:134670/296‑1 (MQ=255) atgCTACCTCTTCTGGAGCCTGTCTGTCACTCCCTGCAGAGTGTATAATTCTGTTGAACGAGGCTGGTTAAACTGAAAAATTTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGGTCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTGGTGCTc < 2:503002/296‑1 (MQ=255) tgtctgtcACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACgg < 1:554989/285‑1 (MQ=255) tgtctgtcACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACgg > 2:554989/1‑285 (MQ=255) gtctgtcACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGCACCATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGACGAATGGCTGACATCGGCGATAACC‑CACCGTTTGCACTGGCAACCCCCTTAATCCCCGATGAGCAGGCGACCATAGAACCAACGCTCGATGAGCTCGTGGATGACATGACTTGGCAACTGGTGCACACCACGGTC‑GGGCCGGGcccca > 2:132641/1‑296 (MQ=255) tgtcACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACGGGC‑GGAACTGGCCCGgcg > 1:323547/1‑298 (MQ=255) gtcACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACGGGC‑GGAACTGGCCCGgcgc > 1:575543/1‑298 (MQ=255) ccTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGat > 2:502067/1‑211 (MQ=255) ccTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGat < 1:502067/211‑1 (MQ=255) gtgtATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACGGGC‑GGAACTGGCCCGGCGCGTCGTGACGTA‑ACGc < 1:277341/298‑1 (MQ=255) aTTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACGGGC‑GGAACTGGCCCGGCGCGTCGTGACGTA‑ACGCCCGATGc > 1:25428/1‑298 (MQ=255) tGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATACAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACTCCGTTTGCACTGGAAACCCGCTTAATCCCCGATGATCAGGCGACCATCGATCAAAAGCTTTATGAGCTAGTGGAGGAAATGAGTTGCCATCTGACGCTC‑CCCCGCGCAGGAACTGCGCCGTAGCGGCGTAACGTACACGccacagacgac > 2:16456/1‑289 (MQ=255) tGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACCCCGTTTGAACTGGAAACCCGCTTCATCCCCGATCAGCAGGCGAGCCTCCAGCCAACGTTGTGTGAGCCAGTGCATGAAAGGAGTTGCCATCTGGTTCTCACTCCGGGT‑GAAACTGGCCCGACGCGTCGTCACGCA‑ACCCGCGCTGCGACg > 2:92378/1‑298 (MQ=255) gTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACGGGC‑GGAACTGGCCCGGCGCGTCGTGACGTA‑ACGCCCGATGCGACGCTGGCAGTAGCGGa > 1:248440/1‑298 (MQ=255) ggAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACGGGC‑GGAACTGGCCCGGCGCGTCGTGACGTA‑ACGCCCGATGCGACGCTGGCAGTAGCGGACCGCgaga < 1:146739/298‑1 (MQ=255) gAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACGGGC‑GGAACTGGCCCGGCGCGTCGTGACGTA‑ACGCCCGATGCGACGCTGGCAGTAGCGGACCGCGAGAt > 1:365725/1‑298 (MQ=255) cTTTATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCAGCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACGGGC‑GGAACTGGCCCGGCGCGTCGTGACGTA‑ACGCCCGATGCGACGCTGGCAGTAGCGGACCGCGAGATGCCTGGc < 1:274487/298‑1 (MQ=255) ttGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACGGGC‑GGAACTGGCCCGGCGCGTCGTGACGTA‑ACGCCCGATGCGACGCTGGCAGTAGCGGACCGCGAGATGCCTGGCt > 1:560045/1‑298 (MQ=255) tttACGTTTTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACGGGC‑GGAACTGGCCCGGCGCGTCGTGACGTA‑ACGCCCGATGCGACGCTGGCAGTAGCGGACCGCgaga < 2:560729/278‑1 (MQ=255) tttACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACGGGC‑GGAACTGGCCCGGCGCGTCGTGACGTA‑ACGCCCGATGCGACGCTGGCAGTAGCGGACCGCgaga > 1:560729/1‑278 (MQ=255) gCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCTATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACGGGC‑GGAACTGGCCCGGCGCGTCGTGACGTA‑ACGCCCGATGCGACGCTGGCAGTAGCGGACCGCGAGATGCCTGGCTTTGGTGAACA‑GATGCGCCAGAt < 1:184711/298‑1 (MQ=255) ttAGTTTCCATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACGGGC‑GGAACTGGCCCGGCGCGTCGTGACGTA‑ACGCCCGATGCGACGCTGGCAGTAGCGGACCGCGAGATGCCTGGCTTTGGTGAACA‑GATGCGCCAGATaa < 1:638675/298‑1 (MQ=255) ccATCTCTGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACGGGC‑GGAACTGGCCCGGCGCGTCGTGACGTA‑ACGCCCGATGCGACGCTGGCAGTAGCGGACCGCGAGATGCCTGGCTTTGGTGAACA‑GATGCGCCAGATAAGCCTGCa < 1:455735/298‑1 (MQ=255) ctctGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACGGGC‑GGAACTGGCCCGGCGCGTCGTGACGTA‑ACGCCCGATGCGACGCTGGCAGTAGCGGACCGCGAGATGCCTGGCTTTGGTGAACA‑GATGCGCCAGATAAGCCTGCAtttt > 1:301110/1‑298 (MQ=255) tctGATCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACGGGC‑GGAACTGGCCCGGCGCGTCGTGACGTA‑ACGCCCGATGCGACGCTGGCAGTAGCGGACCGCGAGATGCCTGGCTTTGGTGAACA‑GATGCGCCAGATAAGCCTGCATTTTg > 1:541852/1‑298 (MQ=255) tCGCGCATCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACGGGC‑GGAACTGGCCCGGCGCGTCGTGACGTA‑ACGCCCGATGCGACGCTGGCAGTAGCGGACCGCGAGATGCCTGGCTTTGGTGAACA‑GATGCGCCAGATAAGCCTGCATTTTGTACCa > 1:425556/1‑298 (MQ=255) tCCAGCGGAGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACGGGT‑GGAACGGTCCCGGCGCGTCGTTACGGA‑AGCACCGCGGCACCGCTCGCAGGAGCGGACCGCGAACTGCATGGCTTT‑GTGACCACGATCAGCCCGATAAACCAGCATTTTTTCCCAAccacca > 2:388253/1‑293 (MQ=255) | TCACTGAGTCCGAGTTCCTGTGGCAGCACAACCAGGATCCAATGGCAGTAGATAAACTGGCGGAAGGTATCCGTAAGTTTGCTATTGACCAGGAAAAACTGGAAAAAATGATCGGCGATC‑TGCTGTAATCATTCTTAGCGTGACCGGGAAGTCGGTCACGCTACCTCTTCTGAAGCCTGTCTGTCACTCCCTTCGCAGTGTATCATTCTGTTTAACGAGACTGTTTAAACGGAAAAATCTTGATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGCGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTAGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACGGGC‑GGAACTGGCCCGGCGCGTCGTGACGTA‑ACGCCCGATGCGACGCTGGCAGTAGCGGACCGCGAGATGCCTGGCTTTGGTGAACA‑GATGCGCCAGATAAGCCTGCATTTTGTACCAACTGCGA > CP006584/10342‑10926 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |