| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006584 | 3,010,362 | G→T | E48* (GAA→TAA) | LY180_14330 → | type VI secretion protein ImpK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006584 | 3,010,362 | 0 | G | T | 98.0% | 162.5 / NA | 50 | E48* (GAA→TAA) | LY180_14330 | type VI secretion protein ImpK |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base T (27/22); minor base C (1/0); total (28/22) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGAGAACCAGTATTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCGAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCCTGCTGCTGGGATTTCGCGGGCGTTATCA > CP006584/3010089‑3010642 | ggAGAACCAGTATTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTa < 1:335373/298‑1 (MQ=255) gaACCAGTATTTTGCGCTGGATATGAACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATCTCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCCGGGAACCCCCGGTCGTCACGGTATGGAGCTGTATCGTCACTGCCAGAGGCAGGGGGAACGTGTCACCCAACGCCCGACAGACGCCGGGTTTAggc > 2:31058/1‑296 (MQ=255) gATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGCCGGATAACAATATCGACGCGTCGCTGCGCGAACCGTTTCTCACGGTGGTGGAACTGCGTCAGGGAACCACCGCGCGCCCCGGTGTGGCGCTGTAACTTCACTGCCAGCGCCCGGTGGAACGCGTCCCCTAACGCATCAAAGATGCCGGGGTTAGCCGGGGGATCGTGGAGccaca > 2:555871/1‑294 (MQ=255) cacaGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTa < 1:409367/298‑1 (MQ=255) gACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCTACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCa > 1:27558/1‑298 (MQ=255) ggCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGCTTAGCCGGGAGGGCGTGGAGCGCATTACCTAAGCGCAGTgcg > 1:274526/1‑298 (MQ=255) aaaTCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCct < 1:609026/298‑1 (MQ=255) aTCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCctgc > 1:351219/1‑298 (MQ=255) ggAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGaaa < 1:171521/298‑1 (MQ=255) gTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGTGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAg > 1:246059/1‑298 (MQ=255) cGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTCACGCCTGAAAGCTGCCGGGTTTAGCCCGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTcc < 1:408665/298‑1 (MQ=255) ctgcATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTc > 1:250985/1‑298 (MQ=255) gggcgcCAGAAACCTGGGGCGACCTGAAATCTGAACTGTTGGCGGTGCTGCGCGCATGAAAAAAGGGACGGATATCAATATCGGCGCGCTGCTGCGCGAAACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCATGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATg < 2:171687/296‑1 (MQ=255) aGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGCGAGCGTGGAGCACATTCCCTACGCGCAGTGCGCCCTGCCGGACGAAACCGTCCGGAGTCCCAGGGGGATgggccccg > 2:388742/1‑292 (MQ=255) aGGAACACTGGGCGAGCGGAAACCTGAGCTGGTTGCGGGGCGGGGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGGATGGAGCTGTAGCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGacgacg < 2:540390/298‑1 (MQ=255) aaCGATGGGGGGACTGAACACTGCACTGCTTGCGGCGCTGCGGGCATGAAAAAAGAGACGGAGTTCAATATCGACGGGATTGTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGGCAGGGAGCCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTc < 2:628536/298‑1 (MQ=255) aCCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCa < 1:116181/298‑1 (MQ=255) cctgaaacctgaaCTGTTTGCGGTGCTGCGCGCATGAAAAACGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTACCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCCGACAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTCCCTACCCGCAGTGCGCCCTGCCGGACGACACCGCCCTGACTCGCAGCGGCCTGGACGACGGCCAGGccctgcgga > 2:312328/1‑291 (MQ=255) tgaaacctgaaCTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACATGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATg > 1:77757/1‑298 (MQ=255) gaaacctgaaCTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGa > 1:131758/1‑298 (MQ=255) acctgaaCTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAgg > 1:103497/1‑298 (MQ=255) aaCTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACCGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCa > 1:142572/1‑298 (MQ=255) tgctgcGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCAt < 1:319624/298‑1 (MQ=255) gcgcgcATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATttct < 1:388742/298‑1 (MQ=255) gcAAGAAAAAAGAGATGGATATCACGATCCGCTGGGGGGTGCGCGACAAGTGTCGGGCGGTGGTGTAACTGGGTCAGGGAACCACCGTGCGGCACGGTATGGAGCGGTATCGTCACTGCCAGCGGCAGGGGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACAGTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCaa < 2:103497/298‑1 (MQ=255) aTGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAaca > 1:77351/1‑298 (MQ=255) tGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACCGTCCTGAGTCGCAGCGGCAGGGACGACGGCCAGGCCATCCGGATGAAGGAGCCACCCCAGACCCCTTTCTTCAacac > 2:147172/1‑298 (MQ=255) aaGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGAACCACTCCAGTCGCATTTCTTCAACACCCTgca > 1:533361/1‑298 (MQ=255) agagACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTgcag < 1:542614/298‑1 (MQ=255) cGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCCACGCGCAGTGCGCCCTGCTGGACGAAACAGCACTGTGTAGCACCGGCCTGGACGCCGGTCAGGCCCTCTGGATGAAGGATCCACTCCCCCCGCACCTCTCCAACccccccccgcccgg > 2:563459/1‑288 (MQ=255) atCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAgc > 1:278260/1‑298 (MQ=255) tatCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGCGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGCACAGCGTGGAGCCCCTTACCTACGAGCAGTCCCCACTGCTGGACGAAACCGCCCTGAGCCGCCGCGGCATGGAGCCCGGTCCGGCCCTCCGGCTGAAGGTACCCCCCCCGTCGCACCTCTTCACCCCCCCCCCGGCCGGCGCgccgctc > 2:176011/1‑297 (MQ=255) tCGAGGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTa < 1:222659/298‑1 (MQ=255) gctgcGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATg < 1:247490/298‑1 (MQ=255) gctgcGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGACCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATg > 1:448633/1‑298 (MQ=255) tgcGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCCTGGACGCCGGTCAGGCCATCTGGATGAAGGATCCACTCCACTCGCCTTTCTTTCACACCCCGCCGGCAGGCGGGCTGCCGTACGAGCGGCTGaa > 2:40744/1‑298 (MQ=255) tttCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGc < 1:357879/298‑1 (MQ=255) tGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGa < 1:31058/298‑1 (MQ=255) tGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGa < 1:555871/298‑1 (MQ=255) cTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGcac < 1:40744/298‑1 (MQ=255) ggCGTCAGGGAACCACCGGGGGTCACGGTATGGAGCTGTAGCGTCACTGCCAGGGGCAGGGGGAACTGGGCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGGGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGcaca < 2:246059/297‑1 (MQ=255) gggAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGCGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATGCACCCCACTCCCCTTTCTTCCACACCCTGCAGGCAGGCGAGCTCCTGTACGAGCGGATCAACCAGGTGTTGCAGGCGCCCCCGCCTGCACAGGTtgcg > 2:401497/1‑296 (MQ=255) gTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCt > 1:66701/1‑298 (MQ=255) aCGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCg > 1:213733/1‑298 (MQ=255) ggAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCctg > 1:58864/1‑298 (MQ=255) gAGCTGTATCGTCACGGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCctgc < 1:343662/298‑1 (MQ=255) gCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCAATCTGGATGAAGGATCCACTCCAGTCACATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCctgctg > 1:128876/1‑298 (MQ=255) cTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCCTGCTGCTGGGATTTcgc > 1:182336/1‑298 (MQ=255) gCGGCAGGTGGTACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACCCCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCATGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCCTGCTGCTGGGATTTCGCGGTCGt > 1:222494/1‑298 (MQ=255) aGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCCTGCTGCTGGGATTTCGCGGGCGTTATCa < 1:147172/298‑1 (MQ=255) | GGAGAACCAGTATTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCGAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCCTGCTGCTGGGATTTCGCGGGCGTTATCA > CP006584/3010089‑3010642 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |