| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006584 | 1,213,485 | Δ7 bp | intergenic (+184/‑105) | LY180_05705 → / → LY180_05710 | DNAse/PTS glucose transporter subunit IIBC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006584 | 1,213,485 | 0 | T | . | 100.0% | 31.1 / NA | 8 | intergenic (+184/‑111) | LY180_05705/LY180_05710 | DNAse/PTS glucose transporter subunit IIBC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (6/2); total (6/2) | |||||||||||
| * | CP006584 | 1,213,486 | 0 | C | . | 100.0% | 31.1 / NA | 8 | intergenic (+185/‑110) | LY180_05705/LY180_05710 | DNAse/PTS glucose transporter subunit IIBC |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (6/2); total (6/2) | |||||||||||
| * | CP006584 | 1,213,487 | 0 | T | . | 100.0% | 31.1 / NA | 8 | intergenic (+186/‑109) | LY180_05705/LY180_05710 | DNAse/PTS glucose transporter subunit IIBC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (6/2); total (6/2) | |||||||||||
| * | CP006584 | 1,213,488 | 0 | G | . | 100.0% | 31.1 / NA | 8 | intergenic (+187/‑108) | LY180_05705/LY180_05710 | DNAse/PTS glucose transporter subunit IIBC |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (6/2); total (6/2) | |||||||||||
| * | CP006584 | 1,213,489 | 0 | T | . | 100.0% | 31.1 / NA | 8 | intergenic (+188/‑107) | LY180_05705/LY180_05710 | DNAse/PTS glucose transporter subunit IIBC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (6/2); total (6/2) | |||||||||||
| * | CP006584 | 1,213,490 | 0 | G | . | 100.0% | 31.1 / NA | 8 | intergenic (+189/‑106) | LY180_05705/LY180_05710 | DNAse/PTS glucose transporter subunit IIBC |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (6/2); total (6/2) | |||||||||||
| * | CP006584 | 1,213,491 | 0 | T | . | 100.0% | 31.1 / NA | 8 | intergenic (+190/‑105) | LY180_05705/LY180_05710 | DNAse/PTS glucose transporter subunit IIBC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (6/2); total (6/2) | |||||||||||
TTAATGGCTAAAACGAGTAAAGTTCACCGCCGAAAATTGGGCGGTGAATAACCGCGTTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTT > CP006584/1213325‑1213762 ||||||| ttaatGGCTAAAACGAGTAAAGTTCACCGCCGAAAATTGGGCGGTGAATAACCGCGTTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTAC‑‑‑‑‑‑‑AATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGt > 1:469588/1‑299 (MQ=255) tCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTAC‑‑‑‑‑‑‑AATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAgctgg > 1:244815/1‑299 (MQ=255) ttCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTAC‑‑‑‑‑‑‑AATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGt > 1:416282/1‑299 (MQ=255) cAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTAC‑‑‑‑‑‑‑AATAAATAAAGGGCGCTTAGATGACCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGCGAACGTAAAACACGCACCCATACTCAGGAGCACTCTCACTTATGTTTAAGAATGCATTTCATAACCTGCAAAAGGTCGGTAAATCGCTGATGCGGCCCGGATCCGTACTGCCTATCGCCGGTATCCTGCTGGGCGGCGGTTCCCCGAATTTCAGCTGGCTTCCCGCCTTTGGCTCGc > 2:538972/1‑299 (MQ=255) tGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTAC‑‑‑‑‑‑‑AATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATg < 2:244815/299‑1 (MQ=255) tGATAGCCGTCAAACAAATTGGCACTGAATTATTTTAC‑‑‑‑‑‑‑AATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCg > 1:398941/1‑299 (MQ=255) cGTCAAACAAATTGGCACTGAATTATTTTAC‑‑‑‑‑‑‑AATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGt < 1:532294/299‑1 (MQ=255) caaacaaaTTGGCACTGAATTATTTTAC‑‑‑‑‑‑‑AATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCtt > 1:382325/1‑299 (MQ=255) ||||||| TTAATGGCTAAAACGAGTAAAGTTCACCGCCGAAAATTGGGCGGTGAATAACCGCGTTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTT > CP006584/1213325‑1213762 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |