Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC	CP006584	3,812,239	(AGA)2→4	coding (434/1020 nt)	LY180_18170 ←	peptide ABC transporter permease

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	= 3812233	2 (0.030)	45 (0.750) +AGAAGA	44/564	0.4	95.8%	coding (440/1020 nt)	LY180_18170	peptide ABC transporter permease
	?	CP006584	3812234 =	2 (0.030)					coding (439/1020 nt)	LY180_18170	peptide ABC transporter permease

CGGATGTAATCCTCGCCCAGCACTTCCAGCATCGAGGAGCGTGTCATACGCACAATGACCGCCAGCGGAATAGTACCCAGCACAATGGCAGGCAAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP006584/3811960‑3812233 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCACGAACTCTTCCCAAACCGGGATGCGGCTTTTCATTGAAATGCCTAGATCGCCATGCATAACGCCCCAAATGTAATGGAGATACTGCTGCCACATCGGTTTATCTAAGCCGAGTTCAGCCAGCAGCTGCGCGTG  >  CP006584/3812234‑3812528                                                                                                                                                                                                                                                                                   ||||||                                                                                                                                                                                                                                                                                                        CGGATGTAATCCTCGCCCAGCACTTCCAGCATCGAGGAGCGTGTCATACGCACAATGACCGCCAGCGGAATAGTACCCAGCACAATGGCAGGCAAGATCATATGGGCGACGGCATCGAGAAAGGTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCAGAAAACCGGTTAACGGATTGGAGGCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCATCAGGTTCCAGTGCACCGAAACGAGCATGATCAGCAACATGCCCCACCAGAAGAAGAAGAACGGCATCGAGTA                                                                                                                                                                                                                                                                                      >  1:360119/1‑299   GATGTAATCCTCGCCCAGCACTTCCAGCATCGAGGAGCGTGTCATACGCACAATGACCGCCAGCGGAATAGTACCCAGCACAATGGCAGGCAAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGC                                                                                                                                                                                                                                                                                    >  1:141077/1‑299               GCCCAGCACTTCCAGCATCGAGGAGCGTGTCATACGCACAATGACCGCCAGCGGAATAGTACCCAGCACAATGGCAGGCAAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCA                                                                                                                                                                                                                                                                        >  1:373152/1‑299                 CCAGCACTTCCAGCATCGAGGAGCGTGTCATACGCACAATGACCGCCAGCGGAATAGTACCCAGCACAATGGCAGGCAAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGG                                                                                                                                                                                                                                                                      >  1:405191/1‑299                  CAGCACTTCCAGCATCGAGGAGCGTGTCATACGCACAATGACCGCCAGCGGAATAGTACCCAGCACAATGGCAGGCAAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCATGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGC                                                                                                                                                                                                                                                                     >  1:408513/1‑299                    gcatctccgggagCGAGGGGCGTGTCATGAGCACAATGACCGCGAGCGGAAGAGTACCCAGCGCAAGGGCGGGCGAGGTCATATGGGCGACGGCATGGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCA                                                                                                                                                                                                                                                                   <  2:314868/286‑1                            AGCATCGAGGAGCGTGTCATACGCACAATGACCGCCAGCGGAATAGTACCCAGCACAATGGCAGGCAAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTCCCAGTGCACCGAAACCAGCATGATCAGCACCATGCACCACCCGAACAAGAAGATGGCCATCCAACAGCACGACATCGCCAGCCCAACCGCcgc                                                                                                                                                                                                                                                           >  2:272096/1‑296                                  GAGGAGCGTGTCATACGCACAATGACCGCCAGCGGAATAGTACCCAGCACAATGGCAGGCAAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATC                                                                                                                                                                                                                                                     <  1:453604/299‑1                                                   caaAATGACCGCCAGCGGAATAGTACCAAGCAAAATGGCAGTAAAGATCATATGGGCGACGGCATCTATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGATCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTT                                                                                                                                                                                                                                    <  1:412029/296‑1                                                              CCAGCGGAATAGTACCCAGCACAATGGCAGGCAAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCC                                                                                                                                                                                                                         >  1:571082/1‑299                                                                    GAATAGCGCCCAGTACAGTGGCAGGGAAGGTCATATGGGGGACGGCATCGATAAAGTTGCGGTGTTCACCCCCGATGGCGGTGTCGATAAGCATAGAACCGGTTAACGGATTGGGGGCATCGGGGAACACCATATCGCTCACGCGGCCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACG                                                                                                                                                                                                                   <  2:323077/299‑1                                                                       tatgACCCAGCACAATGGCAGGCAAAATCATCTGGGGGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTGAACGGAGTGGAGTCATCGAGGAACACCATATCGCTCATGCGACCGGAGACGGGCGTCAGGGTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCG                                                                                                                                                                                                                <  2:408513/295‑1                                                                                  ACAATGGCAGGCAAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCCGAAGAAGAAGAACGGCATCGAGTAGCCGGTCAGCGCCAGGCCACCCGCCGTGTGATCGAAAATGGAACCGCGTTTAACCCCAGCCAACACCCCCACCGGAATACC                                                                                                                                                                                                     >  2:283178/1‑299                                                                                   CAATGGCGGGCAAGGCCATTTGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCGCGGTGGCGGTGTCGATCAGCATAAACACGGTTAACGGATTGGGGTAATCGAGGAACACAATACCGCTAGCGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGAGCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCG                                                                                                                                                                                                    <  2:245435/299‑1                                                                                             CAAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCG                                                                                                                                                                                          >  1:551367/1‑299                                                                                                          GCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGC                                                                                                                                                                             <  1:450041/299‑1                                                                                                           CGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCG                                                                                                                                                                            >  1:536789/1‑299                                                                                                                      ATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATCTCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGGCCGCGCCCGGCCAACCGCCGTGTCATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCCCGCCCACCAGAACACCGCCCGCAGACGAAAAAATCATCcacccaacgccacg                                                                                                                                                                 >  2:145303/1‑285                                                                                                                      ATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAG                                                                                                                                                                 <  1:422322/299‑1                                                                                                                         AAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTC                                                                                                                                                              <  1:154608/299‑1                                                                                                                          AGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCC                                                                                                                                                             <  1:473106/299‑1                                                                                                                                   CTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCC                                                                                                                                                    <  1:623917/299‑1                                                                                                                                                 GCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCTGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCAC                                                                                                                                      >  1:432530/1‑299                                                                                                                                                  CGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCAAAATTCCAGCCTGGCCTGGAGGCGCGGCCCG                                                                                                                                     >  1:95369/1‑299                                                                                                                                                             AGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACCCCAAGTTCCAGCGGGGCCTGGAGGCGCGGAACGAACCCTTCCCA                                                                                                                          >  2:96500/1‑299                                                                                                                                                                       CGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCACGAACTCTTCCCAAACCGGGATG                                                                                                                <  1:424320/299‑1                                                                                                                                                                        GGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCACGAACTCTTCCCAAACCGGGATGC                                                                                                               >  1:172084/1‑299                                                                                                                                                                            AACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCACGAACTCTTCCCAAACCGGGATGCGGCT                                                                                                           >  1:421757/1‑299                                                                                                                                                                               GGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCACGAACTCTTCCCAAACCGGGATGCGGCTTTT                                                                                                        <  1:581449/299‑1                                                                                                                                                                               GGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGAAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCACGAACTCTTCCCAAACCGGGATGCGGCTTTT                                                                                                        >  1:8633/1‑299                                                                                                                                                                                 ATTGGTGTGATCAAGGAACACCATACCGCTCCGTGGACGGGAGACGGGCGTGAGGTTCCAGGGCACCGAACCGAGGAGGATCAGCAGCATGCCGCAGCAGAAGAAGAAGATCGGCATCGCGTTGCCGGGCAGGGCCAGGCCAACCGCTGGGTGATAGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCACGAACTCTTCCCAAACCGGGATGCGGCTTTTCA                                                                                                      <  2:179230/299‑1                                                                                                                                                                                       GTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCCGCCAGCACGCCGACCGGAATACCGACCGCCGCCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTCGAGGCGCGGCACGAACCCTTCCCAAACCGGGACCGGGCCTTTCATTTAAA                                                                                                >  2:194715/1‑299                                                                                                                                                                                         CATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCACGAACTCTTCCCAAACCGGGATGCGGCTTTTCATTGAAATG                                                                                              >  1:168952/1‑299                                                                                                                                                                                                gcACACCAGATCACTCACGAGCACGGGGACGGGGCGCAGGTTCCCGGGCACCGAAACCAGCAAGATCAGCAGCCTGGCCCACCAGAAGAAGAAGAGCGGCATGGAGGAGACGGTCAGCGGCAGGCCACCCGCTGTGTGATCGAAAATGGAACCGCGGTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCACGAACTCTGCCCAAACCGGGATGCGGCTTTTCATTGAAATGCCTAGAT                                                                                       <  2:624291/297‑1                                                                                                                                                                                                        gtcCGCTCACGCGCACGGAGACGGGCGTGAGGTTCAAGTGCACCGAAACCATGATGATCCGCATCATGCCCCACCAGAAGAAGAGGGTCGGAGTCGAGTAGCCGGTCAGCGCCAGGCCAACCGGTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGGACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCCTCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCACGAACTCTGCCCAAACCGGGATGCGGCTTTTCATTGAAATGCCTAGATCGCCATGg                                                                               <  2:141077/296‑2                                                                                                                                                                                                          cgggtcagaCGACGGGGGCCGGGCGCCAGGTTCCAGGGCACCGAAACCAGAATGATCAGCCTCATGCCCCACCAGAGGAAGAAGGTGGGGATCGAGTAGCCGGGCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTACCCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCACGAACTCTTCCCAAACCGGGATGCGGCTTTTCATTGAAATGCCTAGATCGCCATGCAT                                                                             <  2:76875/290‑1                                                                                                                                                                                                              TCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCACGAACTCTTCCCAAACCGGGATGCGGCTTTTCATTGAAATGCCTAGATCGCCATGCATAACG                                                                         <  1:283178/299‑1                                                                                                                                                                                                                   CGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCACGAACTCTTCCCAAACCGGGATGCGGCTTTTCATTGAAATGCCTAGATCGCCATGCATAACGCCCCA                                                                    <  1:656390/299‑1                                                                                                                                                                                                                       CGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGAAAAAATCATCGCGCAGACGCCAACTTCCAGCGTGGCCTGGAGGCGCGGCACGAACCCTCCCCCAACCGGGATCCGGCGTTTCATTGAAACGCCTAGATCACCACGCACAAACCCCCAAcgt                                                                >  2:483342/1‑296                                                                                                                                                                                                                               GGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCTAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCACGAACTCTTCCCAAACCGGGATGCGGCTTTTCATTGAAATGCCTAGATCGCCATGCATAACGCCCCAAATGTAATGGAG                                                        <  1:590179/299‑1                                                                                                                                                                                                                                               GCACCGAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCACGAACTCTTCCCAAACCGGGATGCGGCTTTTCATTGAAATGCCTAGATCGCCATGCATAACGCCCCAAATGTAATGGAGATACTGCTGCCACATC                                        <  1:263021/299‑1                                                                                                                                                                                                                                                    GAAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCACGAACTCTTCCCAAACCGGGATGCGGCTTTTCATTGAAATGCCTAGATCGCCATGCATAACGCCCCAAATGTAATGGAGATACTGCTGCCACATCGGTTT                                   <  1:465237/299‑1                                                                                                                                                                                                                                                     AAACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCACGAACTCTTCCCAAACCGGGATGCGGCTTTTCATTGAAATGCCTAGATCGCCATGCATAACGCCCCAAATGTAATGGAGATACTGCTGCCACATCGGTTTA                                  <  1:96500/299‑1                                                                                                                                                                                                                                                      AACCAGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCACGAACTCTTCCCAAACCGGGATGCGGCTTTTCATTGAAATGCCTAGATCGCCATGCATAACGCCCCAAATGTAATGGAGATACTGCTGCCACATCGGTTTAT                                 <  1:634502/299‑1                                                                                                                                                                                                                                                          AGCATGATCAGCATCATGCCCCACCAGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCACGAACTCTTCCCAAACCGGGATGCGGCTTTTCATTGAAATGCCTAGATCGCCATGCATAACGCCCCAAATGTAATGGAGATACTGCTGCCACATCGGTTTATCTAA                             >  1:312390/1‑299                                                                                                                                                                                                                                                                                   AGAAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGCCGCCAAGTTCCAGCGTGGCCTGGCGGCGCGGCACGAACTCTTCCCCAACCGGGATGCGGCTTTTCATTGAAATGCCTAGAACGCCATGCATACAGCCCCAAATCAAATGGAGATACTGCTGCCACACCGGTTTATCTCAGCCCAGATCAGCCAGCAGCCGCCCG    >  2:321601/1‑299                                                                                                                                                                                                                                                                                     AAGAAGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGTACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCACGAACTCTTCCCAAACCGGGATGCGGCTTTTCATTGAAATGCCTAGATCGCCATGCATAACGCCCCAAATGTAATGGAGATACTGCTGCCACATCGGTTTATCTAAGCCGAGTTCAGCCAGCAGCTGCGCGTG  >  1:368843/1‑299                                                                                                                                                                                                                                                                                   ||||||                                                                                                                                                                                                                                                                                                        CGGATGTAATCCTCGCCCAGCACTTCCAGCATCGAGGAGCGTGTCATACGCACAATGACCGCCAGCGGAATAGTACCCAGCACAATGGCAGGCAAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP006584/3811960‑3812233 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAATACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCACGAACTCTTCCCAAACCGGGATGCGGCTTTTCATTGAAATGCCTAGATCGCCATGCATAACGCCCCAAATGTAATGGAGATACTGCTGCCACATCGGTTTATCTAAGCCGAGTTCAGCCAGCAGCTGCGCGTG  >  CP006584/3812234‑3812528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.