New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	= 2891935	NA (NA)	86 (1.410)	68/586	0.0	95.6%	intergenic (+12/+249)	LY180_13750/LY180_13755	hypothetical protein/transcriptional regulator
	?	CP006584	= 3268631	4 (0.070)					coding (88/1119 nt)	LY180_15515	hydrogenase 2 small subunit

GAACGAGCAGCTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCAT‑GCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATCGACACTAGTGACGATGACATGTGATGACAATGTTTATCGCGAAAGAGCAATGAGTGAGTCGCGGCGGATCAGTTTTCC  >  CP006584/2891646‑2892228                                                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                                                                       gAACGAGCAGCTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCAT‑GCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGt                                                                                                                                                                                                                                                                                               >  1:72421/1‑299 (MQ=31)  aaCGAGCAGCTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCAT‑GCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTc                                                                                                                                                                                                                                                                                              >  1:490464/1‑299 (MQ=31)    cgggcagtTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGAAGCTTCAACTAACATGTTGGCTTGCGGGCGTTCAT‑GCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCt                                                                                                                                                                                                                                                                                            <  2:126592/296‑1 (MQ=17)         agcTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCAT‑GCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGAttt                                                                                                                                                                                                                                                                                       >  1:594928/1‑299 (MQ=34)          gcTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCAT‑GCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGAtttt                                                                                                                                                                                                                                                                                      >  1:547642/1‑299 (MQ=34)              agagCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCAT‑GCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCtg                                                                                                                                                                                                                                                                                  >  1:80623/1‑299 (MQ=35)               gagCGTTTTGATATCATGCTGCTAATCGCCCTGCTGCTTCAACTAACATGTTGGCTTGCGGGCGTTCAT‑GCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGTATCTCTCAGTTCCCCGTCCTGATTTTCAtga                                                                                                                                                                                                                                                                                 >  2:305191/1‑299 (MQ=16)                           atCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCAT‑GCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTGACTCGTGG‑CTGCAACCCGACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCCATCAGTGCACAGTCCTGATGTTCCTGATGAGAAACaacg                                                                                                                                                                                                                                                                     >  2:440788/1‑299 (MQ=255)                                 ctgctAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCAT‑GCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGcc                                                                                                                                                                                                                                                               <  1:285399/299‑1 (MQ=255)                                   gctAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCAT‑GCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCtgatg                                                                                                                                                                                                                                                                               >  1:205704/1‑281 (MQ=38)                                   gctAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCAT‑GCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCtgatg                                                                                                                                                                                                                                                                               <  2:205704/281‑1 (MQ=38)                                    ctAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCAT‑GCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACt                                                                                                                                                                                                                                                            >  1:275314/1‑299 (MQ=255)                                              tGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCAT‑GCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTAc                                                                                                                                                                                                                                                 >  1:127863/1‑299 (MQ=255)                                                 tGCTTCAACTAACATGTTGGCTTGCGGGCGTTCAT‑GCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGc                                                                                                                                                                                                                                              <  1:419721/299‑1 (MQ=255)                                                 tGCTTCAACTAACATGTTGGCTTGCGGGCGTTCAT‑GCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATAATGAGGGAATCTCTCAGTGCACAGTCATGATTTTCCTGATGAGAAACCCCGCCCGCCCCC‑TCACAGGtcaggc                                                                                                                                                                                                                                              >  2:192341/1‑294 (MQ=255)                                                        ccTAACATGTTGGCTTGCGGGCGTTCAT‑GCTCAGAAACAAGGTTGGGACAAGCACTCCCCGGCTAACACAGTCAGAAATCGAAACGTACTCACAACAGTTCGCTTAGGCATGGAACTTTTGCGGCATTCTGGCCACACAATAACAAGGGAATAACTACTCGTGG‑CTGCAACCCTACCAGCTCAAAATTTATTCACAAATGTTTACGCTTTGGGGAAATTTTGAGGGGCACCCTCAAGTCACAGTCCCGATTTTCCTGATGAGAAACCACGCACCCCACT‑CACCAGGGATGGCAACCAAt                                                                                                                                                                                                                                       >  2:424786/2‑299 (MQ=14)                                                           aaCATGTTGGCTTGCGGGCGTTCAT‑GCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACa                                                                                                                                                                                                                                    >  1:538409/1‑299 (MQ=255)                                                            aCATGTTGGCTTGCGCGCGTTCAT‑GCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTCACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCCACACAATAACAAGGGAAGAATTACTCGTGG‑CTGGAACCCTACTCGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCAAAGTCCTTGTTTTCATTATGAGAAACCATGGCCG‑CACTCTCACTGGTACGGACACCAACACAt                                                                                                                                                                                                                                   >  2:640767/1‑299 (MQ=11)                                                                     cTTGCGGGCGTTCAT‑GCTCAGCAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTATAAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACGAGCTCAAAATTTATTCACACATGGTAACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGAACAGTCCTGATTTTCCTGTTGAGAAACCACGCCGTCCACT‑CCCCAGGTACGCCAACAAATACATTAACtagtg                                                                                                                                                                                                                          >  2:490048/1‑295 (MQ=14)                                                                      ttGCGGGCGTTCATGGCACA‑AAACAAGGTTGGGCCAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTAATATCAACAGTTCGCTGAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGATCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGt                                                                                                                                                                                                                         <  2:435307/299‑1 (MQ=255)                                                                                      cacAGAAGCAAGTTTGGTACAAGCACGTCCAGGCATACACAACAAGGAATCTAAACGTACTCTGAACAGTTCGCGTAGGGAAGGAAGTTTTTCTGTAGTCTTGCTACACAAAAATAAGGGAAGACGTAGTCGTGG‑CTGCAACACTACTAGCTCAAAAGTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAAc                                                                                                                                                                                                          <  2:213239/297‑1 (MQ=18)                                                                                           aaaCAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTtc                                                                                                                                                                                                     >  1:218621/1‑299 (MQ=255)                                                                                                     gggACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGAAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGATTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACTACGCACGCCACT‑TCACAGGTACCACAACCAATACATTTACACGCGTCAGCAATGATGACACGGTTCATCAAATtct                                                                                                                                                                                           >  1:195746/1‑299 (MQ=255)                                                                                                               cTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAAATTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGGTGAGAAACCACGCACGCCACT‑TCACACGTACGGCAACCAATACATTTACTCGCGTCAGCACTGATGAACCGGTTCATCAAATTCTCCAGCAAtta                                                                                                                                                                                 >  2:384231/1‑297 (MQ=255)                                                                                                                    aGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGtt                                                                                                                                                                            <  1:286348/299‑1 (MQ=255)                                                                                                                            acaGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGcc                                                                                                                                                                    >  1:335483/1‑299 (MQ=255)                                                                                                                              aGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCAAAGGTAAGCCAACCAATACACTTACTCGCGTCCGCCATGATGAAACGGTACATCAAATTATACAGCAATGCCAACAAATGCACCGa                                                                                                                                                                  >  2:551411/1‑299 (MQ=18)                                                                                                                                tCAGAATTCGAAAGGTACTCTTAACAGTTCGGTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACGTGCTCGTGG‑CTGCAACCCTACTATCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATa                                                                                                                                                                <  2:80623/299‑1 (MQ=255)                                                                                                                                       gtgAAACGTACTCTTAGCAAGTAGATAAGGAATGGAAGGTTTGCGGCATTCTGGGTACACAATAACAAGTGAAGACTTACTCGTGG‑CTGCAACCGTACTGGCCCAAAATTGATTCACGCAGGGTGACGCTTTGGGGAGATTATGAGGGGATCTCGCAGTGCACAGTCCTGATTTTCCTGATGAGAAGCCACGCACGCCACT‑TAAAAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTcag                                                                                                                                                         <  2:367593/297‑2 (MQ=255)                                                                                                                                               tACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGTGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCAATCAATTCCCCACCAATGACGATTAATGCCCCGAAACCTTCCAAAAtacag                                                                                                                                                 >  2:608366/1‑295 (MQ=21)                                                                                                                                                  tctcAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCa                                                                                                                                              <  1:192341/299‑1 (MQ=255)                                                                                                                                                               cTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCAc                                                                                                                                 >  1:524721/1‑299 (MQ=255)                                                                                                                                                                    gctgggAAGGTTTGGGGCATTCTGGCTACACAATAAAAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCGCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTa                                                                                                                            <  2:72421/295‑1 (MQ=255)                                                                                                                                                                        ggAAGTTTTGGGGCAATCTGGATACACAATAACAAGGGCAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGATTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTa                                                                                                                        <  2:594928/299‑1 (MQ=255)                                                                                                                                                                         gAAGTTTTGCAGCATTCTGGCTACACGATAACAAGGGAAGACTTACTCGGGG‑CTGTAACCCTACTAGCTCAATATTTATTCACACGTGGTTACGCTTTGGGGAAAGTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTATGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTaa                                                                                                                       <  2:547642/299‑1 (MQ=255)                                                                                                                                                                           aGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAgg                                                                                                                     <  1:440788/299‑1 (MQ=255)                                                                                                                                                                            gTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGa                                                                                                                    >  1:638102/1‑299 (MQ=255)                                                                                                                                                                                    gCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAaattaatt                                                                                                            >  1:408389/1‑299 (MQ=255)                                                                                                                                                                                       ttCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACTTGGTTACACTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGCTACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCt                                                                                                         <  1:99115/299‑1 (MQ=255)                                                                                                                                                                                        tCTGGCTACACAATATCAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGTGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTg                                                                                                        <  1:369536/299‑1 (MQ=255)                                                                                                                                                                                            gCTAAAGAAAAACAGGGGAAGACTTACTGGGGG‑CTGCAACCCTACTCGCTCAAAATTTATTCACACATGGTTACGCGTTGGGGAAATTATGAGGGGATCTCTCAGGGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAACGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTaag                                                                                                    <  2:127863/299‑2 (MQ=255)                                                                                                                                                                                               acacAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCa                                                                                                 <  1:305191/299‑1 (MQ=255)                                                                                                                                                                                                cacaATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAg                                                                                                <  1:229885/299‑1 (MQ=255)                                                                                                                                                                                                  caATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGa                                                                                              >  1:279733/1‑299 (MQ=255)                                                                                                                                                                                                      aaCAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGaaaaa                                                                                          >  1:324640/1‑299 (MQ=255)                                                                                                                                                                                                        aaaGGGGAGACTTAC‑CGTGGTCTTCAAACCGAATAGATCCAAATTTATTCACACAAGTTTATGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGGCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAg                                                                                        <  2:538409/298‑1 (MQ=255)                                                                                                                                                                                                              aaGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCACGCAATGACAGTTAATGCGCCGATACATTCACAAATAATGCAAGTTTTTAATTACATCTTATTTAAGGAAATTAAATTCAGTAATGCAGGAAAAAAGATGTCa                                                                                  >  2:575813/1‑299 (MQ=38)                                                                                                                                                                                                                gACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATc                                                                                <  1:563691/299‑1 (MQ=255)                                                                                                                                                                                                                      cTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTCAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATCGACACt                                                                          <  1:551411/299‑1 (MQ=255)                                                                                                                                                                                                                         gTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATCGACACTAGt                                                                       <  1:628803/299‑1 (MQ=255)                                                                                                                                                                                                                                    cccTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATCCATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTAATCGACAATAGGAACGATGaaa                                                             >  2:619060/1‑297 (MQ=255)                                                                                                                                                                                                                                        actaGCTCAAAATTTATTCACCCATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATCGACACTAGTGACGATGACAtgtg                                                         <  1:424786/299‑1 (MQ=255)                                                                                                                                                                                                                                        actaGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATCGACACTAGTGACGATGACAtgtg                                                         <  1:640767/299‑1 (MQ=255)                                                                                                                                                                                                                                              tCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACTCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGGTAATGCGCCGATACATTCAAAAATCATGCCAGTTTTTAATTCAATGTTATTTAAGGAAATTAATTTCTGTAATGCCGGAAAAAAGATGTAATCGACACAAGTGACGCTGACATGgtatgaaa                                                   >  2:593019/1‑297 (MQ=255)                                                                                                                                                                                                                                               cAAAGTTTTTTCAGACA‑GGTTTTGTTTTGGGGAAATTATGACGCGACCTTTCGATTCACAGGCCTGATGTTACGAAATGGTAACACGGCAGGCCACT‑TCACAGGTACGGCAACCAATATATTGACTCGCGTCAGCAATGATTAAACGTTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATCGACACTAGTGACGATGACATGTGATGACAAt                                                 <  2:634448/299‑1 (MQ=255)                                                                                                                                                                                                                                                      tATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGATTTTAATTCACTGTTATTTACAGAAATTAATTTCTGTAATGCAGGAAAAAAGTTGTCATCGACACTAATGAAGATGACTGGTGATGAAACTGTTTAt                                           >  2:505930/1‑299 (MQ=255)                                                                                                                                                                                                                                                          cacacaTGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGCCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACCTTCACAAACCATGCACGTTTTTAATTCACTGTTATTTAAGGAAATTACTTTCTGTAATGCAGGAATAAAGATGTCATCGACACTAGTGACAATGACATGTGATGAACATGTTTATcgcg                                       >  2:175735/1‑299 (MQ=255)                                                                                                                                                                                                                                                          caaacaTGGTTACGCTTTGGGGAAATTATGAGGGGACTTCTAAGAGCTCATTCCTGATTTTCCTGATACGAAACCACGCACGCCAGT‑TCACAGGGACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATCGACACTAGTGACGATGACATGTGATGACAATGTTTATcgcg                                       <  2:335483/296‑1 (MQ=255)                                                                                                                                                                                                                                                                tGGGTACGCTTTTGGGAAATTATGAGGCGATCTCTAAGTGAACAGTCCTGATTTTCCTAATGAGAAAACACGCACGCCACT‑TCACATGTACGGCAACCAATTCATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATCGACACTAGTGACGATGACATGTGATGACAATGTTTATCGCGAAagag                                 <  2:275314/299‑1 (MQ=255)                                                                                                                                                                                                                                                                                  aTTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACCGTTAATGCGCCGATACATTCACAAATCATTCCAGTTTTTAATTCACTGTTCTTTAAGGCAATTAATTTCTGTAATGCAGGAAAAAAGATATCATCGACACTAGTGACGATGACATGTGATGACAATGTTTATACCAAAAGAGCAATGAGTGAGTAtcggc               >  2:354138/1‑299 (MQ=255)                                                                                                                                                                                                                                                                                       gAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATCGACACTAGTGACGATGACATGTGATGACAATGTTTATCGCGAAAGAGCAATGAGTGAGTCGCGGCGGATc          >  1:606738/1‑299 (MQ=255)                                                                                                                                                                                                                                                                                               ctctcAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGCTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATCGACACATGTTACGATGACATGTAATGAAAATGTTTATTCCCAAAGAGCAATGAATGAGGCGCGGGCGACCAGCTTTcc  >  2:346980/1‑299 (MQ=255)                                                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                                                                       GAACGAGCAGCTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCAT‑GCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGG‑CTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACT‑TCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATCGACACTAGTGACGATGACATGTGATGACAATGTTTATCGCGAAAGAGCAATGAGTGAGTCGCGGCGGATCAGTTTTCC  >  CP006584/2891646‑2892228

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.