New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	= 347397	78 (1.280)	44 (0.720)	40/586	0.6	50.4%	intergenic (+14/‑444)	LY180_01680/LY180_01685	hypothetical protein/flagellin
	?	CP006584	1213576 =	9 (0.150)					intergenic (+275/‑20)	LY180_05705/LY180_05710	DNAse/PTS glucose transporter subunit IIBC

TTTTTTTAAAGCTCGTAATTAATGGCTAAAACGAGTAAAGTTCACCGCCGAAAATTGGGCGGTGAATAACCGCGTTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTGCAAACATGCCACTGATTTTTGCGATCGGTGTCGCCCTCGGCTTTACCAATAACGATGGCGTATCCGCGCTGGCCGCAGTTGTTGCCTATGGCATCATGGTTAAAACCATG  >  CP006584/1213307‑1213874                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                                           gatatcatgctgctaatcgccctgatgcttcaactaacatgttggcttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGa                                                                                                                                                                                                                                                                               >  1:262777‑M2/270‑299 (MQ=255)  atatcatgctgctaatcgccctgatgcttcaactaacatgttggcttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGaa                                                                                                                                                                                                                                                                              >  1:37194‑M2/269‑299 (MQ=255)     tcatgctgctaatcgccctgatgcttcaactaacatgttggcttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGc                                                                                                                                                                                                                                                                           <  2:280800‑M2/34‑1 (MQ=255)         gctgctaatcgccctgatgcttcaactaacatgttggcttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCCCTCTCAATTATGTTTAAGAATGCAttt                                                                                                                                                                                                                                                                       >  1:190446‑M2/262‑299 (MQ=255)          cggctaatcgcccggatacttcaaatagcatgttggctggggggctgtcatgctcagaaacaaggttgggaaaagcacgtccaggctaacgcagtcagaaatcgaaacgtacgtgcaacagttcgcgtaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTAGGTTTAAGAATGCATTTg                                                                                                                                                                                                                                                                      <  2:390686‑M2/39‑1 (MQ=255)           tgctaatcgccctgatgcttcaactaacatgttggcttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGc                                                                                                                                                                                                                                                                     <  1:385676‑M2/40‑1 (MQ=255)              taatcgccctgatgcttcaactaacatgttggcttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTaa                                                                                                                                                                                                                                                                  >  1:615937‑M2/257‑299 (MQ=255)                   ttaatGGCTAAAACGAGTAAAGTTCACCGCCGAAAATTGGGCGGTGAATAACCGCGTTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTAC‑‑‑‑‑‑‑AATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGt                                                                                                                                                                                                                                                      >  1:469588/1‑299 (MQ=255)                    ccttgatgcttgaagtaaaattgtgggttgagggcgtgcatgctcagaaacaaggttgggaaaagcacgtccaggctaacacattcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcccacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCa                                                                                                                                                                                                                                                            <  2:510248‑M2/49‑1 (MQ=255)                    ccctgatgcttcaactaacatgttggcttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgccgcattctggccacacaataaccagggaagccttcatcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatccctcagtACCCAGGAGCCACCTCAATTATGTTTAAGAATGCATTTGCTAAACTGCa                                                                                                                                                                                                                                                            >  2:503977‑M2/251‑299 (MQ=255)                               aaacacacaggtttgctgtcgggcggtcatgctcagcaacaaaggtgagacacacacctccaggcgaacacagtcagagatcgtaacttactctcaaccgttcgcttaggcatggatgttttgcggcattctggctacacaataacaagggaagacttactcgttgctgcaaccctactagctcaaaatttattcacacagggttacgctttggtgaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTa                                                                                                                                                                                                                                                 <  2:67453‑M2/60‑1 (MQ=255)                                aactaacatgttggcttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTaa                                                                                                                                                                                                                                                >  1:181917‑M2/239‑299 (MQ=255)                                      catgttggcgtgcgggcgttcatgctcagaaaaaaggttgggacgagcaattccaggctaacacagtcagaactcgaaacgtactcttaacagtgcgcttaggcatggaagttttgcggcattctggctacacaataacaagtgaagacttacgcgtggctgcaaccctactagatcaaaatttattcacacatggttacgctttggtgaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCt                                                                                                                                                                                                                                          <  2:406224‑M2/67‑1 (MQ=255)                                                   gggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcctggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactcactcaaaatttattcacacatggttacgctttggggcaattatgcggggatctctccgtACTCAGGATCAGCTGCAATTAGGTTTAAGAATGCATTTGCTCACCTGCAAAAGGTCCGTAACACGCCGATGCTGCCGTTa                                                                                                                                                                                                                             >  2:431168‑M2/220‑299 (MQ=255)                                                                                             ggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTcc                                                                                                                                                                                   <  1:416099‑M2/122‑1 (MQ=255)                                                                                                taacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCcgcg                                                                                                                                                                                >  1:391237‑M2/175‑299 (MQ=255)                                                                                                   cacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAAt                                                                                                                                                                             >  1:450055‑M2/172‑299 (MQ=255)                                                                                                     tCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTAC‑‑‑‑‑‑‑AATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAgctgg                                                                                                                                                                    >  1:244815/1‑299 (MQ=255)                                                                                                      cgtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGCAGCACTCTCAATCATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTCTCCGTACTCACTCTCGCAGGTATCCTGCTGGGCTTCGGTTCCGCGAATTTc                                                                                                                                                                          >  2:82966‑M2/169‑299 (MQ=255)                                                                                                      agtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaaggtaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatcaggggatctctcagtACTCAGGAGCCCTCTCAATTATGTTTAATAATCAATTTTCTACCCTGCATAAGGTCGGTACATCACTGAGGCTACCGGTAACCGTACTCCCTCTCTCAGGTATCCACATGGTGCTCGATTCCGCGAATATc                                                                                                                                                                          >  2:32172‑M2/169‑299 (MQ=255)                                                                                                                cgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggttacacactaacaagggaagacttactcgtggctgcaaccctactagctcaaaatttcttcacacatggttacgctttggggaaattatgaggggatctctcagaACTCACGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAACGGTCGGTAAATCGCTTATGCTCCCGGTATCTGTCCTGCCTATAGCAGTTATCCTGCTGCCGGTCTGTTCCGCCaatttctgctgcacgc                                                                                                                                                                >  2:484999‑M2/159‑294 (MQ=255)                                                                                                                   ttCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTAC‑‑‑‑‑‑‑AATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGt                                                                                                                                                      >  1:416282/1‑299 (MQ=255)                                                                                                                   aacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCccg                                                                                                                                                             >  1:510113‑M2/156‑299 (MQ=255)                                                                                                                     cgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCccgcc                                                                                                                                                           <  1:431168‑M2/146‑1 (MQ=255)                                                                                                                        cAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTAC‑‑‑‑‑‑‑AATAAATAAAGGGCGCTTAGATGACCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGCGAACGTAAAACACGCACCCATACTCAGGAGCACTCTCACTTATGTTTAAGAATGCATTTCATAACCTGCAAAAGGTCGGTAAATCGCTGATGCGGCCCGGATCCGTACTGCCTATCGCCGGTATCCTGCTGGGCGGCGGTTCCCCGAATTTCAGCTGGCTTCCCGCCTTTGGCTCGc                                                                                                                                                 >  2:538972/1‑299 (MQ=255)                                                                                                                                tGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTAC‑‑‑‑‑‑‑AATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATg                                                                                                                                         <  2:244815/299‑1 (MQ=255)                                                                                                                                cagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCGCAATTATGTGTACGAATGCATTTTCTAACCTGCAAAAGGTCGGTAAATAGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCACCTGGCTGCGCGCCTTTGCGTCGCa                                                                                                                                                >  2:566532‑M2/143‑299 (MQ=255)                                                                                                                                cagttcgcttaggcatggaagttttgcggcattctggctacacaataacaaggcaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCACAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGATAAATCTCTGATACTGCCGGTATCCGTACTTACTATCGCAGGTAACCTGCCGGGCGCCGTGTCCGCCAATATCAGCGGTCCGCCGGCCGTGCTACCGCa                                                                                                                                                >  2:79294‑M2/143‑299 (MQ=255)                                                                                                                                   ttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGt                                                                                                                                             <  1:193023‑M2/160‑1 (MQ=255)                                                                                                                                       gttaggcatggaagtgtggcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggtgacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATg                                                                                                                                         <  2:614663‑M2/164‑1 (MQ=255)                                                                                                                                       cttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATg                                                                                                                                         >  1:506500‑M2/136‑299 (MQ=255)                                                                                                                                             tGATAGCCGTCAAACAAATTGGCACTGAATTATTTTAC‑‑‑‑‑‑‑AATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCg                                                                                                                            >  1:398941/1‑299 (MQ=255)                                                                                                                                              atggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAg                                                                                                                                  >  1:466146‑M2/129‑299 (MQ=255)                                                                                                                                                  gagttttgcggcattctggccaaaaaataacaagggaagacttactcgttgctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAgg                                                                                                                              <  2:601019‑M2/175‑1 (MQ=255)                                                                                                                                                    cGTCAAACAAATTGGCACTGAATTATTTTAC‑‑‑‑‑‑‑AATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGt                                                                                                                     <  1:532294/299‑1 (MQ=255)                                                                                                                                                       caaacaaaTTGGCACTGAATTATTTTAC‑‑‑‑‑‑‑AATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCtt                                                                                                                  >  1:382325/1‑299 (MQ=255)                                                                                                                                                             cattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaattcattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCt                                                                                                                   >  1:338073‑M2/114‑299 (MQ=255)                                                                                                                                                                tctggctacacaataacaagggaagacttactcgtggctgcaactctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTg                                                                                                                <  1:118887‑M2/189‑1 (MQ=255)                                                                                                                                                                       acaaaataacaagggaagagttactagtggatgcaaccctactatctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTGCAAACAt                                                                                                         <  2:196672‑M2/196‑1 (MQ=255)                                                                                                                                                                         acaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTGCAAACATGc                                                                                                       <  1:607117‑M2/198‑1 (MQ=255)                                                                                                                                                                             taacaagggcagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctctggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCCGCTGGGCGTCGGTTCCGCGACTTCCAGCTCGCTGCCCGCCGTTGTACCGTATGTTAGGCCCGCAGCCGCCGGTtccgtccttgcacgccatcctcc                                                                                                   >  2:170910‑M2/98‑288 (MQ=255)                                                                                                                                                                                  agggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTGCAAACATGCCACTGAttt                                                                                              <  1:139727‑M2/207‑1 (MQ=255)                                                                                                                                                                                     gaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTGCAAACATGCCACTGATTTTTg                                                                                           >  1:273757‑M2/90‑299 (MQ=255)                                                                                                                                                                                                       cgcTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTGCAAACATGCCACTGATTTTTGCGATCGGTGTCGCCCTCg                                                                         >  1:471574/1‑299 (MQ=255)                                                                                                                                                                                                               actagctcaaaatttattcacacatggttacgcctttgggaaagtatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCGGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTGCAAACATGCCACTGATTTTTGCTATCGGTGTCGCCCTCGGCTTTAcc                                                                 <  2:466146‑M2/236‑1 (MQ=255)                                                                                                                                                                                                                 tagctcaaaatttattcacacatggttacgctttggggaaattatgagtggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTAt                                                                                                                                          <  2:53985‑M2/163‑1 (MQ=255)                                                                                                                                                                                                                 tagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTAt                                                                                                                                          >  1:53985‑M2/62‑224 (MQ=255)                                                                                                                                                                                                                      caaaatttattcacacatggttacgctttggggaaattatgagtggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTGCAAACATGCCACTGATTTTTGCGATCGGTGTCGCCCTCGGCTTTACCAATAACg                                                          <  1:32172‑M2/243‑1 (MQ=255)                                                                                                                                                                                                                                        ggttacggtttggggatattatcgggggatctctaagtCACAAGGGGCACTCTCAATTATGTTTAAGAATGCGTTTGCTAACCTGCAGAAGGTCGGTAAATCGCTGATGCTGCCGGTAGCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTGCAAACATGCCACTGATTTTTGCGATCGGTGTCGCCCTCGGCTTTACCAATAACGATGGCGTATCCGCGCTgg                                        <  2:615937‑M2/261‑1 (MQ=255)                                                                                                                                                                                                                                        ggttacgctttggggaaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTGCAAACATGCCACTGATTTTTGCGATCGGTGTCGCCCTCGGCTTTACCAATAACGATGGCGTATCCGCGCTgg                                        <  1:503977‑M2/261‑1 (MQ=255)                                                                                                                                                                                                                                                       aaattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATACATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGAGGCGGCCTGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTGCAAACATGCCACTGATTTTTGCGATCGGTGTCGCCCTCGGCTTTACCAATAACGATGGCGTATCCGCGCTGGCCGCAGTTGTTGCCt                         <  1:55185‑M2/276‑1 (MQ=255)                                                                                                                                                                                                                                                        aattatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTGCAAACATGCCACTGATTTTTGCGATCGGTGTCGCCCTCGGCTTTACCAATAACGATGGCGTATCCGCGCTGGCCGCAGTTGTTGCCTa                        <  1:56942‑M2/277‑1 (MQ=255)                                                                                                                                                                                                                                                           tatgaggggatctctcagtACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTGCAAACATGCCACTGATTTTTGCGATCGGTGTCGCCCTCGGCTTTACCAATAACGATGGCGTATCCGCGCTGGCCGCAGTTGTTGCCTATgg                     <  1:320485‑M2/280‑1 (MQ=255)                                                                                                                                                                                                                                                                              aCTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTGCAAACATGCCACTGATTTTTGCGATCGGTGTCGCCCTCGGCTTTACCAATAACGATGGCGTATCCGCGCTGGCCGCAGTTGTTGCCTATGGCATCATGGTTAAAACCATg  <  1:82966/299‑1 (MQ=255)                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                                           TTTTTTTAAAGCTCGTAATTAATGGCTAAAACGAGTAAAGTTCACCGCCGAAAATTGGGCGGTGAATAACCGCGTTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTGCAAACATGCCACTGATTTTTGCGATCGGTGTCGCCCTCGGCTTTACCAATAACGATGGCGTATCCGCGCTGGCCGCAGTTGTTGCCTATGGCATCATGGTTAAAACCATG  >  CP006584/1213307‑1213874

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.