New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	= 3172593	0 (0.000)	67 (1.110)	61/580	0.1	100%	coding (28/273 nt)	LY180_15050	hypothetical protein
	?	CP006584	4311141 =	NA (NA)					intergenic (‑130/+105)	LY180_20655/LY180_20660	hypothetical protein/hypothetical protein

CGTATCACCAGCATACCGGTGTGGCTGTAATCGGAATGGGTTGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATTTGAAAGATGATGTCGCCAGTTTGCGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCATTAGCCGCCAGACGGTCGCGGAACGCCCGTCCCCACTCAGTCTTACTGGTGGCTACCATTG  >  CP006584/4310845‑4311427                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                               cGTATCACCAGCATACCGGTGTGGCTGTAATCGGAATGGGTTGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATTTGAAAGATGATGTCGCCAGTTTGCGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATa                                                                                                                                                                                                                                                                                              >  1:556362/1‑299 (MQ=255)    aTCACCGGCATACCGGTGTGGCTGTAATCGGAATGGGTTGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATTTGAAAGATGATGTCGCCAGTTTGCGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTg                                                                                                                                                                                                                                                                                           <  1:360539/299‑1 (MQ=255)      cACCAGCATACCGGTGTGGCTGTAATCGGAATGGGTTGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATTTGAAAGATGATGTCGCCAGTTTGCGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGtt                                                                                                                                                                                                                                                                                         >  1:524496/1‑299 (MQ=255)       acgagcaggccGGTGTGGCTTGTATTGGAATGGGTTGCCAGTTGGATCGCTTTTCTTTGAGATGAGCGAGTGATTTGAAAGATGATGTCGCCAGTTTGCGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGGAGGCTGAGGATCAGCAGCCTGTTGTTCATAGTTGAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGGGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTa                                                                                                                                                                                                                                                                                        <  2:251438/290‑1 (MQ=255)              tACCGGTGTGGCTGTAATCGGAATGGGTTGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATTTGAAAGATGATGTCGCCAGTTTGCGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTg                                                                                                                                                                                                                                                                                 <  1:216560/299‑1 (MQ=255)                    tgtgGCTGTAATCGGAATGGGTTGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATTTGAAAGATGATGTCGCCAGTTTGCGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGtt                                                                                                                                                                                                                                                                           <  1:461115/299‑1 (MQ=255)                      tgGCTGTAATCGGAATGGGTTGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATTTGAAAGATGATGTCGCCAGTTTGCGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGtttt                                                                                                                                                                                                                                                                         >  1:155989/1‑299 (MQ=255)                           gTAATCGGAATGGGTTGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATTTGCAAGATGATGTCGCCAGTTTGCGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCCGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTGGTGC‑AAATTCAATAAATTGCAATTTGAAGTAGACACTGTTATGGCCGGCACTGTTTTTcat                                                                                                                                                                                                                                                                    >  2:115127/1‑297 (MQ=255)                              aTCGGAATGGGTTGCCAGTTGGATTGCTTTACTTTGCGATGAGCGAGAGATTTGAAAGATGATGTCGCCAGTTTGCGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGt                                                                                                                                                                                                                                                                 <  1:179792/299‑1 (MQ=255)                                     tGGGTTGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATTTGAAAGATGATGTCGCCAGTTTGCGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGttt                                                                                                                                                                                                                                                          <  1:233800/299‑1 (MQ=255)                                                ttGGATCGCTTTACTTTGCGATGAGCGAGAGATTTGAAAGATGATGTCGCCAGTTTGCGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCa                                                                                                                                                                                                                                               <  1:549322/299‑1 (MQ=255)                                                                    aTGAGCGAGAGATTTGAAAGATGATGTCGCCAGTTTGCGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGcc                                                                                                                                                                                                                           <  1:272954/299‑1 (MQ=255)                                                                       aGCGAGAGATTTGAAAGATGATGTCGCCAGTTTGCGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGATCAGCAGCCTGCTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACCAGTTCGTGC‑AAATTCAATAAATTGCCATATTACGTAGATACGGTTCTGGCCTGCCAGCTTTTTCTTGGTCCGGTTTCCCGCATCGCAGGCCTGCCACACACCGCGCCgcc                                                                                                                                                                                                                        >  2:612007/1‑297 (MQ=38)                                                                          gagagaTTTGAAAGATGATGTCGCCAGTTTGCGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AACTTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCCGGTCCGGTTTCCCGGATGGCAGCCATCCCCAAcacaccccagcaacg                                                                                                                                                                                                                     >  2:494170/1‑288 (MQ=38)                                                                                         tgatgTCGCCAGTTTGCGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCAt                                                                                                                                                                                                      <  1:615620/299‑1 (MQ=255)                                                                                         tgatgTCGCCAGTTTGCGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCAt                                                                                                                                                                                                      <  1:299782/299‑1 (MQ=255)                                                                                                gCCAGTTTGCGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTcc                                                                                                                                                                                               >  1:431147/1‑299 (MQ=255)                                                                                                  cAGTTTGCGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCcgc                                                                                                                                                                                             >  1:191845/1‑299 (MQ=255)                                                                                                  cAGTTTGCGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCcgc                                                                                                                                                                                             <  1:541842/299‑1 (MQ=255)                                                                                                                          cAGGTACAGAAACCGGTGGGCTGAGGATCAGCAGCCTGTTGTTCATAGTGTAACGTCCATGTATAAACAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCTTGAACGCCTTAGCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCTGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTa                                                                                                                                                                     <  2:423480/299‑1 (MQ=21)                                                                                                                          cAGGTACAGAAACCAGCAGGCTGAGGATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTa                                                                                                                                                                     <  1:187362/299‑1 (MQ=255)                                                                                                                           cggTACAGAAACCAGCAGGCTGAGGATCAGCAGCCTGTTTTTCCTAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AACTTCAATAAATCGCAATATCACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGTCATGCCCGACCCAGCCCCTTCAGGCGCGGTTTTTTTCTTCCCCTCCCCGATTTTTCCGCCACTACCGGAttct                                                                                                                                                                    >  2:96054/2‑297 (MQ=25)                                                                                                                           agttgcAGAAACCAGAAGGCGGGGGATAAGGAGGCTGTTTTTCTAAGTTAACCGGTCATTTATAAAAAGCGGTGGGTCGCCGACAACGTGCTCGTGGGTTATGCCGGATGCGGCGTGAAGGCCTGATCCGGCCTACAAGTTCGTGC‑AAATTCAATAGATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCGTCCGCGATTTTTACGCCGCTACCGGATTag                                                                                                                                                                    <  2:511895/294‑2 (MQ=18)                                                                                                                                     aCCAGCAGGCTGAGGATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCCGACACAGCGCCGTCAGGCGCTGTTTTTTTCTTCCCTTCCGCTATTTTTACGCCCCTACCGGCTTATGCCGCGACGc                                                                                                                                                          >  2:575057/1‑299 (MQ=255)                                                                                                                                      ccAGCAGGCTGAGGATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑ACATTCAATAAATTGCAATATGACGTAGCTACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGCCATGCCAGACACAGCGCCGCCAGGCGCTTTTTTTTTCATCCCTTCCGCGATTTTTCCGCCTCTACCGGATTCTCCCGTGAcccc                                                                                                                                                         >  2:561377/1‑296 (MQ=25)                                                                                                                                                  ggATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACg                                                                                                                                             <  1:575057/299‑1 (MQ=255)                                                                                                                                                   gATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCCCGc                                                                                                                                            >  1:31313/1‑299 (MQ=255)                                                                                                                                                     tCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGGCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCt                                                                                                                                          <  1:499587/299‑1 (MQ=255)                                                                                                                                                        gcagcCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGAc                                                                                                                                       <  1:107048/299‑1 (MQ=255)                                                                                                                                                             cTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATACATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGCTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGACGTCAGGCGCTGTTTTTTTCATCCCTTCCCCCATTTTTACGCCGCTACCGGATTATGCCTCGACCACTCGAACCGCCCGCCCGACGTccg                                                                                                                                  >  2:356322/1‑297 (MQ=21)                                                                                                                                                                         gTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGc                                                                                                                      <  1:201712/299‑1 (MQ=255)                                                                                                                                                                                   cATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCACGTTTTTTCCTGGTCCGGTTTCCCTGATTGCAGGCATGCCAGCCACAGCCCCGCCAGGCGCTGTTTTTTTCATCCCTCCCGCGATTTTTCCGCCCCTACCGGATTATGCCGTGAACACTCGCCCGGCCCGCCTGACTTCAGCCACCCATACGCCCCCTGCGcc                                                                                                            >  2:343056/1‑299 (MQ=18)                                                                                                                                                                                           aaaaGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTgcg                                                                                                    <  1:637349/299‑1 (MQ=255)                                                                                                                                                                                              aGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGcat                                                                                                 >  1:282705/1‑299 (MQ=255)                                                                                                                                                                                                 ggTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGcatcat                                                                                              <  1:42289/299‑1 (MQ=255)                                                                                                                                                                                                                 cGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCAcc                                                                              >  1:32967/1‑299 (MQ=255)                                                                                                                                                                                                                    gcgcGTTGTTTTGGCCGGATCGGGTTTGAACACCTTAGCCGGCTTACATGTT‑GTGCGAAATTAAATAAAGTGCAATGTGACGTAGAGAGTGTTGTGGCCTGCAAGTTTTTTCCGGGTCCGGTTCCCCGGATTTCAAGCATGACCGACACAGCGCCGTCAGGCGCTGTTTTGTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGAGTATGCCGTGACGCGTCGCACGGCACGCCTGAGTTCAGCACTCCATACGCCACCTGTGCCAGCTTGGGCATCATCGCGCCGAGAATCAccttt                                                                           <  2:386810/296‑1 (MQ=14)                                                                                                                                                                                                                       cGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCAcctttcct                                                                        <  1:172803/299‑1 (MQ=255)                                                                                                                                                                                                                         ttgttTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCAcctttccttt                                                                      <  1:148447/299‑1 (MQ=255)                                                                                                                                                                                                                                 ttccgatctggcgTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCAt                                                              <  1:78645/290‑1 (MQ=255)                                                                                                                                                                                                                                   cGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCATTa                                                            <  1:494170/299‑1 (MQ=255)                                                                                                                                                                                                                                               gAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCATTAGCCGCCAGACgg                                                >  1:268016/1‑299 (MQ=255)                                                                                                                                                                                                                                               caaCGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATCACGTAGATACTGTTCTGGCCTGCAAGCTTGTTCCTCGTCCGGTTTCCCGGCTTGCAGGCACGACCGACACACCGCCCTCAGGCCCTGTCTTTCTCATCACTTCCGCGCTTTTCACTCCCCTACCCGACTATGCCTACACGCATCCACCGCCCCGCCTGACTTCACCACCCCATCCGCCTCCTGTGCCCGCATCCCCCTCCTCCTCCCCAGAACCACCTTCCCGTCCTCGCCCTTACCCGCCatcccg                                                >  2:544670/2‑294 (MQ=255)                                                                                                                                                                                                                                                                   aaGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCATTAGCCGCCAGACGGTCGCGGAACGCCCGTCCCCa                            <  1:115127/299‑1 (MQ=40)                                                                                                                                                                                                                                                                    aGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGCTTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCCTCATCGCGCCGATAATCACCTTTCCTTTCTTGCCATTAGCCGCCAGACCGTCGCGGACAGCCCTCcccccc                           >  1:376327/1‑297 (MQ=255)                                                                                                                                                                                                                                                                    aGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTAAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCATTAGCCGCCAGACGGTCGCGGAACGCCCGTCCCCAc                           >  1:283219/1‑299 (MQ=39)                                                                                                                                                                                                                                                                                aTTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGCGAATCACCTTTCCTTTCTTGCCATTAGCCGCCAGACGGTCGCGGAACGCCCGTCCCCACTCAGTCTTACt                >  1:35955/1‑299 (MQ=25)                                                                                                                                                                                                                                                                                  tCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCATTAGCCGCCAGACGGTCGCGGAACGCCCGTCCCCACTCAGTCTTACtgg              <  1:343056/299‑1 (MQ=35)                                                                                                                                                                                                                                                                                       aaaTTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCATTAGCCGCCAGACGGTCGCGGAACGCCCGTCCCCCCTCAGTCTTACTGGTGGCt         >  1:417954/1‑299 (MQ=21)                                                                                                                                                                                                                                                                                       aaaTTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCATTAGCCGCCAGACGGTCGCGGAACGCCCGTCCCCACTCAGTCTTACTGGTGGCt         >  1:308320/1‑299 (MQ=34)                                                                                                                                                                                                                                                                                         aTTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGCACGGCACGCCTGACTTCCGCACTCCATCCGCCACCTGTGCCAGCTTGCGCAACATCGCGCCGAGAATCACCTCTCCTTTCTTGCCATTACCCCCCAGACGGCCGCCGAACCGCCGTCCCCACCCCGTCTTACTGGTGGCtca       >  2:453856/1‑297 (MQ=11)                                                                                                                                                                                                                                                                                              aaTATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCATTAACCGCCAGACGGTCGCGGAACGCCCGTCCCCACTCAGTCTTACTGGTGGCTACCATTg  >  1:457551/1‑299 (MQ=17)                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                               CGTATCACCAGCATACCGGTGTGGCTGTAATCGGAATGGGTTGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATTTGAAAGATGATGTCGCCAGTTTGCGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGATCAGCAGCCTGTTTTTCATAGTTAAACGTCCATGTATAAAAAGCGGTGGGTCGCAGACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGC‑AAATTCAATAAATTGCAATATGACGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCATTAGCCGCCAGACGGTCGCGGAACGCCCGTCCCCACTCAGTCTTACTGGTGGCTACCATTG  >  CP006584/4310845‑4311427

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.