| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006584 | 230,529 | T→C | D275G (GAC→GGC) | LY180_01015 ← | LysR family transcripitonal regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006584 | 230,529 | 0 | T | C | 98.1% | 174.2 / NA | 52 | D275G (GAC→GGC) | LY180_01015 | LysR family transcripitonal regulator |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (24/27); minor base A (0/1); total (24/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
ATACGACTCCGGCACAAGTGATTCTGGCGTGGGCTATGGGGGAAGGTTACTCAGTAATTCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACA‑AAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGTCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTCAGTGAATCCCAGGCAAACATGTTGCTTTAAATCGTCGATCGTTTCTG > CP006584/230236‑230817 | aTACGACTCCGGCACAAGTGATTCTGGCGTGGGCTATGGGGGAAGGTTACTCAGTAATTCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACA‑AAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTg < 1:580582/299‑1 (MQ=255) cGACTCCGGCGCAAGTGATTCTGGCGTGGGCTATGGGGGAAGGTTACTCAGTAATTCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATATTAAGGCACA‑AAATTTACAGATCGATGCAAGAGAGACACAAGCGATGGCCGCCCTGGATTGCAACGACCGCCTGGTTAGACCGACAGCTCGTGCTCCTGAATGGAATTAAGACTCTCTGACAGCCACTCCGGGAGCTGTTTGTACAGGCTCGCCAAGGAAATAGATACCAGCCCGGATTC‑GGGTACTTACGGCACGGCCGcgctgc > 2:162460/1‑294 (MQ=255) ggCACAAGTGATTCTGGCGTGGGCTATGGGGGAAGGTTACTCAGTAATTCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACA‑AAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCCCGGCCGCTGTAATAGACTg > 2:208160/1‑299 (MQ=255) gCACAAGTGATTCTGGCGTGGGCTATGGGGGAAGGTTACTCAGTAATTCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACA‑AAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGCCAGCTCCTCCGGGAGCTGTTTTTAACTGCTCGCTAAGGAAATCGATACAAGCCCGGATGC‑TAGTAATTACCGCACGCCCCCGGTAAAAGACCGc > 2:61497/1‑299 (MQ=255) cTGGCGTGGGCTATGGGGGAGGGTTAATCAGTAATTCCTTCTTATAATAAAGGTAAAAACCTGGAAAGGAATCTTAAGGCACA‑AAATTTACAGCTCGATGCCAAAGAGAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCAt < 2:15910/299‑1 (MQ=255) gTGGGCTATGGGGGAAGGTTACTCAGTAATTCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACA‑AAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCa < 1:208160/299‑1 (MQ=255) ggggAAGGTTACTCAGTAATTCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACA‑AAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAacac < 1:316611/299‑1 (MQ=255) cTCAGTAATTCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACA‑AAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCa < 1:491570/299‑1 (MQ=255) cgttaTTCCTTTTTATACTAAACGTAAAAACCTGGAAAGTAATCTGAAGGCACA‑AAATTTACAGCCTGATGCCAAAGAAAAAGAAGTGGTCGCCGCCCTGGATTGCAGCGACAGGCTGGTTAGCCCGAAGGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTa < 2:185729/295‑1 (MQ=255) aTTCCTTCTTCAACGAAACGTAAAAACCTGGAAAGAAAGCTGAAGG‑ACACAAGTTTACAGCGCGATGCCCACTATAAGAAAGCGATCGCCTCCCTGCGTTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCGCTGCCAGCTCCGCCGGGCGCTGGGTTTACATGCACGCTCAGGAGTTCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGACTCTGTAATAGACTGCACTGAATGGCATTGCAACTGGCAACACTTTATCTGTCATTAACTc < 2:160729/299‑1 (MQ=255) ttcttcttCTACTAAACGTACAAACCTGGACAGTAATCTTAAGGCACA‑AAATTTACAGCTCGATGCCCACGACAACAAAGCGATCTCCGCCCTGCATTGCAACAACCGCCTTGTTAGCCCGAAAGCTCTGGCCCATGCATGGGATCATGCCTCTCTGCCACCTCCTCCGGGAGCTGTCTTTACATGCCCGCCAAGGACATCGTTACAATCACGCATGG‑CCGTACTTACCGCACGGCTGCTGTCATAGACTCTATTGAACGGCACTTCTACTCAATACACTTTATATCCCATCCACTcca > 2:59640/3‑299 (MQ=255) cttcttCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACA‑AAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTccacc > 1:565542/1‑299 (MQ=255) cttctACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACA‑AAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAAt < 1:653930/299‑1 (MQ=255) tctACTACAAGTATAAACCTTGAAAGTGATCTTAATGGACA‑AAATTTACAGCTCGATGACAAAGATAAAAAAGGGTGTGCCGCTCTTGATTGCAACGACCGGCTGGTTCGCCCGGAAGGTCTGGCTCCTGAATGGGATTAAGCCTCGCTGACAGCTCCGCCGGGAGCTGGTTTTACATGCGCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTAGCTGCCATTAACTCCACCAATtc < 2:512282/299‑1 (MQ=255) taAACGTAAAAACCTGGAAAGTAATCTTAAGGCACA‑AAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGATCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCcgc < 1:35228/299‑1 (MQ=255) aggTAAAAACCGGGAAAGCATATGAAAGGGAAA‑AAGTGTAACGCGCGATGCCAAAGATAAAACGCCGATCGCCGCCGTGTATGCCAACGTCCTCCGGTTTAGCCCTAAAGGTCTGGCTCCTTGAGGGAATTAAGCCTCTCGGACAGCTCCTCCGGGGGCTG‑TTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCgcgagc < 2:269886/297‑1 (MQ=255) cGTAAAAACCTGGAAAGTAATCTTAAGGCACA‑AAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCgcgagc > 1:504000/1‑299 (MQ=255) aaaaaCCTGGAAAGTAATCTTAAGGCACA‑AAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGAt < 1:55859/299‑1 (MQ=255) aaaaaCCTGGAAAGTAATCTTAAGGCACA‑AAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGAt < 1:417596/299‑1 (MQ=255) ccTGGAAAGTAATCTTAAGGCACA‑AAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCtt > 1:509841/1‑299 (MQ=255) aTCTTAAGGCACA‑AAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATg > 1:19993/1‑299 (MQ=255) aTTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTCTAATAGACTGCACTGAATGGCATTGACACTGGCAACACTTTATCTGCCATTCACTCCACCAATTCTCCGCGAGCGATTTCTTTTTCGATCATGTAGTCGGCCAAacac > 2:280116/1‑299 (MQ=255) tttACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCTTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGAATGCACTGAATGGCATTGCCACTGGCCACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGACCGATTTCTTTGTCGATCATGTAGTCGGCCAAAAACg > 2:277534/1‑299 (MQ=255) cAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAAt < 1:653067/299‑1 (MQ=255) aGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATc > 1:29689/1‑299 (MQ=255) tGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTCCTTACCGCACGGCCGCTGGAATAGCATGCACTGAATTGCATTGCCACTGGCAACACTTTATCTGCCATTAACCCCCACAATTACCCGCGCGCGCATTCCTTGTCGACCACGTACTTCGACCAAACCCCAATCCCGttcc > 2:514478/1‑297 (MQ=255) ccAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCa > 1:72218/1‑299 (MQ=255) aaaaaGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCCCTGGCAACACTTTATCTGCCATTACCTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTATTCGGACAAACACACAATCCCGTTGCCCCCCAGACaa > 2:592941/1‑299 (MQ=255) aGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCt > 1:113980/1‑299 (MQ=255) gccCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACCGGCAACCCTTTATCTGCCATTACCCACACCACTTCTCCGCCAGCGATTTCTTTTCCGATCATGTAGTCGGACAAACAACCAATCCTGTCTCCCCTCACGCACACTTGTTCCActgt > 2:434274/1‑299 (MQ=255) ccTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCTTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGttt > 1:543811/1‑299 (MQ=255) tGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTcc < 1:318404/299‑1 (MQ=255) tgatggagcggccGCCTGGGTAGCCTGAAAGGTCTGGGTGCTTATTGGGAGTAAGCCTCTCTGAAATGTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGTCCGTCTGC‑GCGTACTTACAGCACGTCCGCTGTAATAGACTGCACTGAATGGCATTGCCACGGTCAACACTTGATCTGCCATTAACTCCACCCATTCTCCGCGAGCGATTTCTTTGTCGAGCATGTAGTCGGACAAAAACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTcccc < 2:189821/288‑1 (MQ=255) aCGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTg < 1:336614/299‑1 (MQ=255) cTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGTATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAAt < 1:50605/299‑1 (MQ=255) aTTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTa < 1:6619/299‑1 (MQ=255) aaGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTTCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACAAGCAATCCCATTGCCAATCAGGCAAACCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCCTACTTAACCCCCTTGAATTGTCCCTccccaccg > 2:632898/1‑292 (MQ=255) gCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACCGGc > 1:85206/1‑299 (MQ=255) ctctctGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGGAATTGTCCATCACTACAGGCTa > 1:358138/1‑299 (MQ=255) cAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGCAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAg < 1:540471/299‑1 (MQ=255) ggAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACGAACCGTACTTCACCTCATGTAATTGTCCATCATTACATGCTATCGGCCAGGTATTGAGGGa > 1:580053/1‑299 (MQ=255) gCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGc < 1:61497/299‑1 (MQ=255) tttACAGGTTCCCTAAGGAAATCGGAAAAGGCCCGG‑TGCGGGGTCCTTACCGCAGGGCCGCGGTAATAGATGGCACGGAATGGCATGGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTc < 2:72218/299‑1 (MQ=255) tACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTCAg > 1:54343/1‑299 (MQ=255) aagggccGCTAAGGAAAACGAAAAAAGCCGCGATGA‑GCGTACGTACCGGCCGGCCGCGGTAAAAGAGTGCACTGATTGGCATTGCCACTGGCAACACTTTATCTGCCGTTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTCAGTg < 2:624016/293‑1 (MQ=255) aaTCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTCAGTGAATCCCAGGCAAACa < 1:447988/299‑1 (MQ=255) aaTCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCAACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACCAACCCTCCTTCACCCCATGTAATTTTCCCTCACTCACGGATCTCGGCCAGGCATTGATGGAAGCGGGTTCAGTCAATCCCAAGCaaaac > 2:235370/1‑297 (MQ=255) aaaGCCCGGATGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTCAGTGAATCCCAGGCAAACATGTTGCtt < 1:592941/299‑1 (MQ=255) tGC‑GCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCCCCGCGAGCGATTTCTTTGTCGATCATGTAGTTGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTCAGTGAATCCCAGGCAAACATGTTGCTTTAAAtcgtcg < 1:514478/299‑1 (MQ=255) tACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTCAGTGAATCCCAGGCAAACATGTTGCTTTAAATCGTCGATCGtt > 1:379163/1‑299 (MQ=255) aCTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCTGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTCAGTGAATCCCAGGCAAACATGTTGCTTTAAATCGTCGATCGttt < 1:434274/299‑1 (MQ=255) tACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTCAGTGAATCCCAGGCAAACATGTTGCTTTAAATCGTCGATCGTTTCTg < 2:113980/299‑1 (MQ=255) | ATACGACTCCGGCACAAGTGATTCTGGCGTGGGCTATGGGGGAAGGTTACTCAGTAATTCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACA‑AAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGC‑GCGTACTTACCGCACGGTCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTCAGTGAATCCCAGGCAAACATGTTGCTTTAAATCGTCGATCGTTTCTG > CP006584/230236‑230817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |