Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006584	2,312,773	C→G	intergenic (‑83/+436)	LY180_11070 ← / ← LY180_11075	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006584	2,312,773	0	C	G	100.0%	129.0 / NA	44	intergenic (‑83/+436)	LY180_11070/LY180_11075	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (20/24);  total (20/24)

GTAATAGCAATTTTTAATCGTGAACTACAGAATATATTCAACCAACTAATAGAATATTAGTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTTTGTTGAGTCGCCATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCACTATCAGTAACTTAACATCAAAGTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTTCTGCGATCTACTTTCCAGATATTTTTTGCCAAT  >  CP006584/2312489‑2313047                                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                   gTAATAGCAATTTTTAATCGTGAACTACAGAATATATTCAACCAACTAATAGAATATTAGTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCT‑CTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATTTTGCACCCCGGa                                                                                                                                                                                                                                                                     >  1:236056/1‑299 (MQ=255)   aaTAGCAATTTTTAATCGTGAACTACAGAATATATTCAACCAACTAATAGAATATTAGTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGAt                                                                                                                                                                                                                                                                    <  1:222857/299‑1 (MQ=255)               tAATCGTGAACTACAGAATATATTCAACCAACTAATAGAATATTAGTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTAcc                                                                                                                                                                                                                                                        >  1:207926/1‑299 (MQ=255)                 aTCGTGAACTACAGAATATATTCAACCAACTAATAGAATATTAGTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTg                                                                                                                                                                                                                                                      <  1:488508/299‑1 (MQ=255)                     tGAACTACAGAATATATTCAACCAACTAATAGAATATTAGTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGc                                                                                                                                                                                                                                                  >  1:447253/1‑299 (MQ=255)                           aCAGAATATATTCAACCAACTAATAGAATATTAGTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCaccacc                                                                                                                                                                                                                                            >  1:136674/1‑299 (MQ=255)                             gagattattttacccaacTAGTAGGATATTATTTAATTGCGGGGGTAAGCGGTTTTCCCCCTTGGTGTGGTTTCAATTTGCCCAGGACTTCAACAAATCAATCAACCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCg                                                                                                                                                                                                                                          <  2:440689/286‑1 (MQ=11)                                           caacTAATAGAATATTAGTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGa                                                                                                                                                                                                                            >  1:490931/1‑299 (MQ=255)                                                       tatTAGTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGt                                                                                                                                                                                                                >  1:320241/1‑299 (MQ=16)                                                       tatTAGTTTATTAAAGGGGAACGTGGTTTTCCCCCTTAGGTGCGTTTCAATTTGCCCATTACTTCAACAAATCAAGCCACCGGAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGCGTCCGCGTGTCCAGCCGATCTCCTGATTAAGGAGCGCAACACCAGCACCTTCCCCTGACACTGCCTGTCGATACTGGTGTACGTATGTTGGACCACGAGGTTGCACTCCGGATCAGAGCACTACCTGCGGCACAACCCGTCCGGTAGCCAGGACTTGAAATGGGt                                                                                                                                                                                                                <  2:512739/299‑1 (MQ=255)                                                           aGTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGa                                                                                                                                                                                                            >  1:638390/1‑299 (MQ=12)                                                            gTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGAt                                                                                                                                                                                                           <  1:610684/299‑1 (MQ=12)                                                              tttgttaaGGGGCAACGGGTTTTCCCCCTTACTGTCGTTGTAACTTGCCCATTACTTCCACAAATCCATCAACCGTAACAGACCCACAAATAGCTCAAGTACGGCAATGCGCACGGTTAACTTTGGTGTCAGCGTGTCTATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTGACCCTTACTCTGCCTGTCGATACTGGTTTACGTATGTTGGACCCCGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATcc                                                                                                                                                                                                         <  2:599053/293‑1 (MQ=11)                                                              ttattaAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATcc                                                                                                                                                                                                         <  1:603611/299‑1 (MQ=12)                                                               tattaAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACTGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGATCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCTGTAGCCAGGACTTGAAATGGGTTCGATCCg                                                                                                                                                                                                        <  1:284664/299‑1 (MQ=255)                                                                      gggggAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAAc                                                                                                                                                                                                 >  1:393478/1‑299 (MQ=12)                                                                               ggTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACa                                                                                                                                                                                        >  1:600614/1‑299 (MQ=16)                                                                               ggTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACa                                                                                                                                                                                        <  1:334661/299‑1 (MQ=16)                                                                                          ttAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATtat                                                                                                                                                                             <  2:250960/299‑1 (MQ=255)                                                                                              ttGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAAt                                                                                                                                                                         >  1:596633/1‑299 (MQ=255)                                                                                                 cGTTTTCATTTGGCCATTATGTCAAAAAATCAATCAACCGGAAAAGGTCCACTAATCGCTTCAGTCCGGCTATCAGCATGGTTAACTGTTGTTTCAGCATGTCCATCCGCTCCCCTGATTAAGGAGCGAAACCACAGCACCGTACCCTTACACCGCCTGTAGTTACTGGTTTACGTATGTTGGACCAGGATGTTGCAGTTCGGATCAGAGCATTACTTGCGGCCCCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGCTCCGGCGCAACTTCCCAACAGTCAGGATTATAACtctc                                                                                                                                                                      <  2:459659/299‑1 (MQ=255)                                                                                                            gCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAAt                                                                                                                                                           <  1:249165/299‑1 (MQ=255)                                                                                                                             atcaatcaACCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATAAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCAagag                                                                                                                                          >  1:309701/1‑299 (MQ=255)                                                                                                                               caatcaaCCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAggt                                                                                                                                        >  1:575939/1‑299 (MQ=255)                                                                                                                               caatcaaCCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCCCCACTTCCCAACCGTCAGGATTAGAAATCTACTTTTCTTAATTTCAACACTTTCCagcgtg                                                                                                                                        >  2:126159/1‑295 (MQ=11)                                                                                                                                    aaCCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTta                                                                                                                                   <  1:470559/299‑1 (MQ=255)                                                                                                                                           aCAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAAttcg                                                                                                                            >  1:176111/1‑299 (MQ=255)                                                                                                                                              cagCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTCTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTCCCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGTACCACGATGTTGCACTCCGGCTCAGAGCACTACCTTCGGCACCACCCGTCCGGTAGCCAGAACTTGCAATTGGTTCGATCCGTCGCAACTTCCCACCAGCCAGCATTATAAATCTCATTATCTTAATTCCAAACATGTCACGAGATGCGTAAAAttcgttc                                                                                                                         >  2:109037/2‑299 (MQ=11)                                                                                                                                                                agaCGGCAATGAGCATGGTTAACTTTTGTGTTAGCGTGTCCATCCGCTCTTCTTATTAAGGAGCGCAACACCAGCACCTTACCCTGACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGc                                                                                                       <  2:366626/297‑1 (MQ=14)                                                                                                                                                                  aCGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCAc                                                                                                     <  1:424909/299‑1 (MQ=255)                                                                                                                                                                                     aCTTTTGTGTCAGCGTGTCCATCCGCTTGCCCTATTAAGGAGCGCAAGCCCCGCCCTTGTCCCTTACCCTGCCTGTCGATACTGGTTAACGTTTGTTGGACCCAGATGTTGCACTCCGGAGCAGGGCCATTGTGTAGGCACCACCCGGCCGGTAGCCAGGACTTGAAATGGGTTCGATGCGGCGCCACTTCCGAACAGTCAGGATTATACATCTCATTACCTTAATTTAAACATTGTCCATGGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCACTATCAGTAACTTAACATCa                                                                                  <  2:600614/299‑1 (MQ=255)                                                                                                                                                                                       ttttGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCTAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCACTATCAGTAACTTAACATCaaa                                                                                <  1:120787/299‑1 (MQ=255)                                                                                                                                                                                           gtgtCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCACTATCAGTAACTTAACATCAAagtag                                                                            <  1:356406/299‑1 (MQ=255)                                                                                                                                                                                               cAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTACACTATCAGTAACTTAACATCAAAGTAGtaaa                                                                        >  1:187764/1‑299 (MQ=255)                                                                                                                                                                                                   gtgtCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACCCTGTCCAGAGCTGGTTATAATTCGTTCGTTGAGTTGCCATGTTGCCCTATACGTAACTTAACATCAAAGTATtaaaaaaa                                                                    >  2:20945/1‑299 (MQ=17)                                                                                                                                                                                                    tgtCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCACTATCAGTAACTTAACATCAAAGTAGTAAATaaaa                                                                   <  1:653071/299‑1 (MQ=255)                                                                                                                                                                                                            cGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCACTATCAGTAACTTAACATCAAAGTAGTAAATAAAAGAACCTGc                                                           <  1:289501/299‑1 (MQ=255)                                                                                                                                                                                                                  ccTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCACTATCAGTAACTTAACATCAAAGTAGTAAATAAAAGAACCTGCCTCAcc                                                     <  1:81104/299‑1 (MQ=255)                                                                                                                                                                                                                                        cgCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCAATACCTGCGCCACCACCCGTCCGGTAGCCAGGACTTGAACTGGGTTCGCTCCGGCGCAACTTCCCAACCGTCAGGATTCTAAATCTCATTATCTTCATTGCAACTCTGTCCAGAGGTGGTTATACTTCGTCCGTTGCGATTCCAGGTTGCACTAACCGTAACTTAACATCAAATTAGTAAATAAAAGAACCTGCATCCACAGCAGGTTTTTTTTATTTCTGc                               >  2:359564/2‑299 (MQ=17)                                                                                                                                                                                                                                                    ttacACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTGGCACTATCAGTAACTTAACATCAAATTAGTAAATAAAAGAACCTGCCTTACCAGCAGGTTTTTTTATTTTCTGCGATTTCATTTcc                   >  2:618758/1‑299 (MQ=18)                                                                                                                                                                                                                                                     tacACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCACTATCAGTAACTTAACATCAAAGTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTTCTGCGATCTACTTTCCa                  <  1:20945/299‑1 (MQ=255)                                                                                                                                                                                                                                                          tGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCACTATCAGTAACTTAACATCAAAGTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTTCTGCGATCTACTTTCCAGatat             <  1:19413/299‑1 (MQ=255)                                                                                                                                                                                                                                                                  gATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCACTATCAGTAACTTAACATCAAAGTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTTCTGCGATCTACTTTCCAGATATTTTTTGcc     <  1:571078/299‑1 (MQ=255)                                                                                                                                                                                                                                                                     aCTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCACTATCAGTAACTTAACATCAAAGTAGTAAATAAAAGAACCTGCCTCACAAGCAGGTTTTTTTATTTTATGAGATCTACTTTCCAGATATTTTTTTCCAAt  >  2:114511/1‑299 (MQ=18)                                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                   GTAATAGCAATTTTTAATCGTGAACTACAGAATATATTCAACCAACTAATAGAATATTAGTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCACTAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTTTGTTGAGTCGCCATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCACTATCAGTAACTTAACATCAAAGTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTTCTGCGATCTACTTTCCAGATATTTTTTGCCAAT  >  CP006584/2312489‑2313047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑