| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006584 | 2,505,816 | A→G | intergenic (‑1173/‑340) | LY180_11895 ← / → LY180_11905 | hypothetical protein/phosphate acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006584 | 2,505,816 | 0 | A | G | 97.4% | 124.5 / NA | 39 | intergenic (‑1173/‑340) | LY180_11895/LY180_11905 | hypothetical protein/phosphate acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (17/21); total (18/21) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
GGTACCGAGCTCGAATTCCGCGCGCCCGATGAATTGATCCCGGAAGTTCCTATTCTCTAGAAAGTATAGGAACTTCGAATTGGTCGACAAGCTCCCCATCGATCCGGCGATCATCTTCCACCTGCACGACACCCTGGGCATGAGCGTTGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGCTTTGAAGTTGATCATGAACGCAACCTGGCTGCACGTTTCGGCAAATCTGGTTTCATCAACAAAGAAGGTACCCGTCCTGCGGTGGTTATCCCAACCA‑ACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGC > CP006584/2505520‑2506105 | gcagcttcttttgcaccgctgcacaacccggctcacctgatcggtatcgaagaagctctgaaatctttcccacagctgaaagacaaaaacgttgctgtatttgacaccgcgttccaccagactatgccggaagagtcGCATGAGCGTTGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCa < 1:357925‑M2/162‑1 (MQ=255) acccggctcacctgatcggtatcgaagaagctctgaaatctttcccacagctgaaagacaaaaacgttgctgtatttgacaccgcgttccaccagactatgccggaagagtcGCATGAGCGTTGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTgatgga > 1:175780‑M2/113‑299 (MQ=255) gatcggtatcgaagaagctctgaaatctttcccacagctgaaagacaaaaacgttgctgtattagacaccgcgttccaccagactatgccggaagagtcGCATGAGCGTTGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGAc < 1:108770‑M2/200‑1 (MQ=255) tcgaagaagctctgaaatctttcccacagctgaaagacaaaaacgttgctgtatttgacaccgcgttccaccagactatgccggaagagtcGCATGAGCGTTGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCtgttgt < 1:262551‑M2/208‑1 (MQ=255) gaagctctgaaatctttcccacagctgaaagacaaaaacgttgctgtatttgacaccgcgttccaccagactatgccggaagagtcGCATGAGCGTTGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCa < 1:194630‑M2/213‑1 (MQ=255) gaaatctttcccacagctgaaagacaaaaacgttgctgtatttgacaccgcgttccaccagactatgccggaagagtcGCATGAGCGTTGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTggtggt < 1:411652‑M2/221‑1 (MQ=255) ctttcccacagctgaaagacaaaaacgttgctgtatttgacaccgcgttccaccagactatgccggaagagtcGCATGAGCGTTGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCgg > 1:148268‑M2/74‑299 (MQ=255) acagctgaaagaaaaaaacgtggctggaattcacaccgggacccacggaaatatgcaggaagagtcGGATTGGCGTTGACGCAATCAACAAACTGCGGGCCAGAGGGTCGGGCCTGCGGGGTCTGACCGAAGTGACCAGCGACTGCCGCAATGGTGAACACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAAGGGACGTTG‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTgaaaag < 2:153673‑M2/233‑2 (MQ=255) agctgaaagacaaaaacgttgctgtatttgacaccgcgttccaccagactatgccggaagagtcGCATGAGCGTTGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGACGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTCGCGAAATGCATAGGTGCCTACACTGCGCGGCAGGGAGGTCGTCTGGACGCTGTTGGTTTCCCTGGCGGGGTCGGGTAAAAGGc > 2:600767‑M2/65‑299 (MQ=255) acaaaaacgttgctgtatttgacaccgcgttccaccagactatgccggaagagtcGCATGAGCGTTGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGt < 1:260991‑M2/244‑1 (MQ=255) aaaaacgttgctgtatttgacaccgcgttccaccagactatgccggaagagtcGCATGAGCGTTGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTc > 1:141806‑M2/54‑299 (MQ=255) atttgacaccgcgttccaccagactatgccggaagagtcGCATGAGCGTTGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTg < 1:515250‑M2/260‑1 (MQ=255) cgttccacaagactatgccggaagagtcGCATGAGCGTTGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCAAACTggg < 1:476588‑M2/271‑1 (MQ=255) ccaccagactatgccggaagagtcGCATGAGCGTTGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTTTGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGCAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCACACTGGGCGTg > 1:82695‑M2/25‑299 (MQ=255) caagactacgccggaagagtgGCATGAGCCTGGACGCAATCAAAAAACTGCTAACCAAAGGGGCGGGGCTGCTGGGGTGGACCGAAGTGACCAGCGACGGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGAGTCGAAGCGCGCAAGGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTg < 2:175780‑M2/278‑1 (MQ=255) cagactatgccggaagagtcGCATGAGCGTTGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTgg < 1:367317‑M2/279‑1 (MQ=255) ccgatgccggaagagtcGCATGAGCGTTGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTAGGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGCt < 1:345809‑M2/282‑1 (MQ=255) ctatgccggaagagtcGCATGAGCGTTGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGCtt < 1:39557‑M2/283‑1 (MQ=255) gaagagtcGCATGAGCGTTGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGCTTTGAAGTTg > 1:69207‑M2/9‑299 (MQ=255) gtcGCATGAGCGTTGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACAGCCTCTATGTTGAAGACAACTACGCGACGAAAGAAGACTAGAAGCGCGCAAGGGACGTTT‑ACGGCCACCGCCTGGCGAAATGCACCGGCGCCTACACTGCTCTGATGGATGGTCGTCTGGACGCTTTTGTCTTACCTGCTGGTACCGGCGAAAATCCCTCGATGGTTCTTGAACATTCTCTGGGCCAACTGGGCGTCAGGGGCTGTGAATTTGAGcag > 2:431727‑M2/4‑298 (MQ=255) ttGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGCTTTGAAGTTGATCATGAACGCAACCTg < 1:600767/299‑1 (MQ=255) tGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGCGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGCTGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGCTTTGAAGTTGATCATGAACGCAACCTgg > 2:191705/1‑299 (MQ=255) caacaaACTGCTGACCAAAGGGTCTGGCCTGCTGGTGCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAGGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGCTTTGAAGTTGATCATGAACGCAACCTGGCTGCACGtt < 2:635876/299‑1 (MQ=255) aaaCTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTCTGTTGAACACAACTACCGGACGAAAGAAGACCCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAACACACCGGTGCCTACACCACGCTGAACGATGGACGTCTAGCCGCTCGTGAATTCCCTGTTTGTAGCTGAGAACACGCCCACATGCTTCGTGAAATGTCCTTGCGCACACTGCGCGTTCTGGGCTATGACATTATTCTACAACGCAACCCTGGTGCACGCTTCga > 2:27959/1‑298 (MQ=255) aaGAGTCGGGCCGGGTGGGTCTGACCGAAGTGACCAGCGACTGCCGCGATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAAGGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGTTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCACACTGGGCGTGCTGGGCTTTGAAGTTGATCATGAACGCAACCTGGCTGCACGTTTCGGCAAATCTGGTTtc < 2:148268/299‑1 (MQ=255) tCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGCTTTGAAGTTGATCATGAACGCAACCTGGCTGCACGTTTCGGCAAATCTGGTTTCATcaa > 1:40979/1‑299 (MQ=255) gCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGTTTCGTGAACTGTCTCTGGGCAAGCTGGGAGTGCTGGGCTTTGCAGTTGGTCATCAACGAACACTGCCGCCACCATTCGTGCAATCTGGTGTCATCTACaaa > 2:734/1‑299 (MQ=255) tGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGCTTTGAAGTTGATCATGAACGCAACCTGGCTGCACGTTTCGGCAAATCTGGTTTCATCAACAAAGAAGGTACCCGt > 1:526722/1‑299 (MQ=255) ccGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGCTTTGAAGTTGATCATGAACGCAACCTGGCTGCACGTTTCGGCAAATCTGGTTTCATCAACAAAGAAGGTACCCGTCCTGCGGTGGTTACCccaacca < 1:517136/299‑1 (MQ=255) cGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGCTTTGAAGTTGATCATGAACGCAACCTGGCTGCACGTTTCGGCAAATCTGGTTTCATCAACAAAGAAGGTACCCGTCCTGCGGTGGTTACCccaacca‑a > 1:33481/1‑299 (MQ=255) cTAGGTTGAATACAACTACGCCACGGAAGAAGACGCGAAGCGCGGAATGGCAGTTT‑ACTGCCACCGCCTGGCGAAATGCAGCGGTGCCTACACTGGGCTGATGGGTGGTCGTCTGGGCGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGCTTTGAAGTTGATCATGAACGCAACCTGGCTGCACGTTTCGGCAAATCTGGTTTCATCAACAAAGAAGGTACCCGTCCTGCGGTGGTTACCCCAACCA‑ACg < 2:611304/299‑1 (MQ=255) cAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCCAACTGGGCGTGCTGGGCTTTGAAGTTGATCATGAACGCAACCTGGCTGCACGTTTCGGCAACTCTGGTTCCATCAACAAAGAAGGTACCCGTCCTGCGGTGGTGACCCCAACCA‑ACGAAGAACAGGttc > 2:225687/1‑298 (MQ=255) aaatACGGGACGAAAGAGGCAGGGAGGGGCG‑AATGGAGGTTTGACTGCGCCCGCTTGGCGAAGTGGATGCGGGCCGCCACTGCGCGGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGCTTTGAAGTTGATCATGAACGCAACCTGGCTGCACGTTTCGGCAAATCTGGTTTCATCAACAAAGAAGGTACCCGTCCTGCGGTGGTTACCCCAACCA‑ACGAAGAACTGGTTAt < 2:293145/296‑1 (MQ=255) gaAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGCTTTGAAGTTCATGATGAACGCAACCTGGCTGCCCGTTTCGGCAAACCGGGTTTCATCAAAAAAGCAGGTCCCCGTCCACGGGGTGTTCCCCCCACCA‑ACGAAGAACGAGTTACCGCCAAAGaag > 2:520447/1‑297 (MQ=255) cgcAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATCCACTGGTGGTATCGGTGAAAATGCCGCGCTGGCTCGTGAACTGTCTCTGGTCAAACTGGGCGTGCTGGGCTTTGAAGTTGATCATGAACGCAACCTGGCTGCCCGTTTCGGCAAATCTGGTTTCATCACCAAAGAAGGTACCCGCCCGTCGGTGGTTA‑CCCAACAACACGAACAAATGGTTACCGCGCAAAACCCGAgcccgccgccgaccc > 2:447204/1‑287 (MQ=255) aTGGACGTTT‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGCTTTGAAGTTGATCATGAACGCAACCTGGCTGCACGTTTCGGCAAATCTGGTTTCATCAACAAAGAAGGTACCCGTCCTGCGGTGGTTACCCCAACCA‑ACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGAtt < 1:431727/299‑1 (MQ=255) tt‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACCCTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGCTTTGAAGTTGATCATGAACGCAACCTGGCTGCACGTTTCGGCAAATCTGGTTTCATCAACAAAGAAGGTACCCGTCCTGCGGTGGTTAcccc < 2:404076/237‑1 (MQ=255) tt‑ACTGCCACCGCCTGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGCTTTGAAGTTGATCATGAACGCAACCTGGCTGCACGTTTCGGCAAATCTGGTTTCATCAACAAAGAAGGTACCCGTCCTGCGGTGGTTAcccc > 1:404076/1‑237 (MQ=255) tGGCGAAATGCATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGCTTTGAAGTTGATCATGAACGCAACCTGGCTGCACGTTTCGGCAAATCTGGTTTCATCAACAAAGAAGGTACCCGTCCTGCGGTGGTTACCCCAACCA‑ACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGc > 1:642667/1‑299 (MQ=255) | GGTACCGAGCTCGAATTCCGCGCGCCCGATGAATTGATCCCGGAAGTTCCTATTCTCTAGAAAGTATAGGAACTTCGAATTGGTCGACAAGCTCCCCATCGATCCGGCGATCATCTTCCACCTGCACGACACCCTGGGCATGAGCGTTGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTT‑ACTGCCACCGCCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCGATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGCTTTGAAGTTGATCATGAACGCAACCTGGCTGCACGTTTCGGCAAATCTGGTTTCATCAACAAAGAAGGTACCCGTCCTGCGGTGGTTATCCCAACCA‑ACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGC > CP006584/2505520‑2506105 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |