| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006584 | 3,010,362 | G→T | E48* (GAA→TAA) | LY180_14330 → | type VI secretion protein ImpK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006584 | 3,010,362 | 0 | G | T | 96.6% | 188.9 / NA | 59 | E48* (GAA→TAA) | LY180_14330 | type VI secretion protein ImpK |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base T (31/26); minor base C (2/0); total (33/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGCGGCGCTGCCGCTGCGACTGGAGAACCAGTATTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCGAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCCTGCTGCTGGGATTTCGCGGGCGTTATCAGGATCCGGTGGCCC > CP006584/3010068‑3010656 | ggcggcGCTGCCGGTGGGACTGGGGAACCAGTATTTGGCGCTGGATATGCACAGGGACGCGGCTAAAGCGATGCTGGGGTCCGGGTGCTGCATGATTTATGTGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAAc < 2:364158/298‑1 (MQ=255) ggcgCTGCCGCTGCGACTGGAGAACCAGTATTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGcc < 2:63076/298‑1 (MQ=255) ggcgCTGCCGCTGCGACTGGAGAACCAGTATTTGGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGcc < 1:78113/298‑1 (MQ=255) cgctgccgctgcGACTGGAGAACCAGTATTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTg > 1:202174/1‑298 (MQ=255) ccgctgcGACTGGAGAACCAGTATTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGa > 1:37429/1‑298 (MQ=255) cGACTGGAGAACCAGTATTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑Cgg < 1:289461/298‑1 (MQ=255) cggggaaaCCAGTATTTTGCGCTGGGTATGCACAGGGAGGGGGCTAAATGGATGCGGGAGTCCGGGTGCTGCATGATTTAGGCGGCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGtt < 2:34075/292‑1 (MQ=255) cTGGAGAACCAGTATTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGtt > 1:69188/1‑298 (MQ=255) tGGAGAACCAGTATTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGGTTCTGACGGTGGTGGACCTGCGTCAGGGACCCACCGTGCGGCACGGTCGGGAACTGTACCGTCACTGCACACGGCATGCGCAACTGGTCCGTCAACCGCTGGAAGATGCGCGGGtt > 2:493906/1‑298 (MQ=255) cAGTATTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCGGTACCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCCAACCCCTGAAAGGGGC‑CGGGTTTAGCCcggc > 2:365212/1‑297 (MQ=255) aTTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGc < 1:356309/298‑1 (MQ=255) ttGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTg < 1:535899/298‑1 (MQ=255) ggATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGcaca > 1:439409/1‑298 (MQ=255) tGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACCTTAcc > 1:456232/1‑298 (MQ=255) acaGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGTTAAGGCATGAAGCATCA‑CGGGGTTAGCCGGGGGAGCGTGGGGCACATTACCCAc > 2:99278/1‑298 (MQ=255) aGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTCCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTAcgc > 1:312383/1‑298 (MQ=255) gACGCGGGTAAGTGGAGGCTGGAGTCCGGGGGCTGCATGATTTATGGGCCAGGAACCAGGGGGGACCGGAAACCTGAACTGTTTGCGGGGCTGCGCGCATGAAAAAAGAGACGGAGAGCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCa < 2:307262/298‑1 (MQ=255) gggTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCt < 1:99278/298‑1 (MQ=255) tgctgcATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCCGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAACGGGGACCCAATTACCTACGCGCAGGGCCCCCTGCTG‑GCGGAAACAGTcccagg > 2:476927/1‑294 (MQ=255) gctgcATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGGGCACATTACCTACGCGAAGGTCGCCCTGCGG‑GGCGAAACAGACCTCAGt > 2:355901/1‑298 (MQ=255) aTGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAACGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCCGTGCCCCCCGCCG‑GACCACACCGTCCTCAGTCGccg > 2:162955/1‑296 (MQ=255) aggcgcgggggaCCGTGGGGGACCGGAAACCTGAGCTGGTTGGGGGGGGGCGCGCATGAAAAAAGAGGCGGAGATCAAGATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATg < 2:148338/287‑1 (MQ=255) cAGGAGCCAGGGGCGTCTTGAAACCGGAACTGTGTGGGGTGCTGCGGGCATGAAAAAAGGGACGGGATTCAATATCGACGCGCTGCTGCGCGGCACGTTTCTGACGGTGGGGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGgacgac < 2:582329/298‑1 (MQ=255) aaacctgaaCTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACCCGTTTCTGCCGGTGGTGGAACTGCGACAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGCTGC‑GGGGTTTAGCCGGGAGAGCGTGGGCCACCTTACCTACGCCAACTGGGCCCTGCTGCGACGACA‑AGTCCTAGGGCGCCGCGGCCGCGCTGAGGGTCTGGCCATccgcgagag > 2:303252/1‑290 (MQ=255) acctgaaCTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAgg < 2:69188/298‑1 (MQ=255) gaaCTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACCTTACCTACGCCCAGGGCGCCCTGCCG‑GACCAAACAGCCCTGAGTCCCAGCGGCATGGACCGCGGTCAGGCCACCTGGATGAAGGGTcc > 2:441566/1‑298 (MQ=255) aaCTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCa < 1:394041/298‑1 (MQ=255) gCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTc < 1:441566/298‑1 (MQ=255) gctgcGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGTCGGTCAGGCCCTCTGGATGAAGGAACCACCCCCGTCGCaat > 2:512931/1‑296 (MQ=255) cATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTCCGTCACGGTATGGCGCTGTATCGTCACTGCCAGCGTCAGGTCGAACTGGTCCGCTAACCCCTGAAAGATGC‑CGGGTTTAGCCGGGAGCGCGTGGAGCACATTACCTACGCCCAGCGCGCCCTTCTG‑GACGAAACAGTCCGCACTCGCCGCGGCATGGACGACGGTCCGGCCACCTGGACGCAGGACCCACCCCAGgcgccaccctctaac > 2:259339/1‑287 (MQ=255) aaaaaaGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACTGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACCCCCGTCGCATTTCTTCCACAccc > 2:565404/1‑298 (MQ=255) gaCGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCAc < 1:211013/266‑1 (MQ=255) gaCGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCAc > 2:211013/1‑266 (MQ=255) cGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCCGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACCTTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCCTGGGCGACGGTAAGGCCATCCGGATGAAGGAACCCACCCAGTCGCATTTCTTTAAACCCCCGccagcagg > 2:442959/1‑298 (MQ=255) tatCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAg < 1:493312/298‑1 (MQ=255) tCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTa > 1:300254/1‑298 (MQ=255) aCGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGa < 1:153987/298‑1 (MQ=255) gctgctGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCAGGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACCCCCTGCAGGCAGGCGAGCTGCGGCACGAGCgg > 2:172431/1‑298 (MQ=255) ctgctgCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGa < 1:24229/298‑1 (MQ=255) ggcggggaacGTTTCTGACGGTGGTGGGACTGCGTCAGGGAACCACCGTGCGTCACGGGATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGaa < 2:268005/290‑1 (MQ=255) tGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGa < 1:493906/298‑1 (MQ=255) aCGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGc > 1:298247/1‑298 (MQ=255) cGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACCGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCCTCTGGACGAAGGATCCACCCCAGCGGCATTTCTTCAACACCCTGCAGGCAGGCCGACTGCCGGACGAGCGGATGAAACAgggtgttcgcgagcc > 2:12698/1‑285 (MQ=255) gtggtgGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCcg < 2:202174/298‑1 (MQ=255) ggtggAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCGGCTGTACGCACGGATGAAGCAGGTGTTGGAGGGGGCcgcc > 2:154386/1‑297 (MQ=255) tggAACTGCGTCAGGGAACCACCGTGGGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGcc < 1:197313/298‑1 (MQ=255) cAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCtg < 1:355901/298‑1 (MQ=255) ggAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGc > 1:178330/1‑298 (MQ=255) gAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCt > 1:450851/1‑298 (MQ=255) aCGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCg > 1:5115/1‑298 (MQ=255) gTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCgtgt > 1:377944/1‑298 (MQ=255) gTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATAGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGTGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCctgctgctg < 1:162955/298‑1 (MQ=255) aTCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCCTGCTGCTggg > 1:434739/1‑298 (MQ=255) cAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCCTGCTGCTGGGATTTCGCGGGCGTTATc < 1:565404/298‑1 (MQ=255) ggAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCCCCTGCACCGGCTGTGCTGACCTGCCTTCACCGTGTCCTGCTGCTGGGCTTTCGCGGCCCTTATCCGGac > 2:208191/1‑297 (MQ=255) gAACTGGTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCCTGCTGCTGGGCTTTCGCGGGCGTTATCAGGATc > 2:51341/1‑298 (MQ=255) gTCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCCTGCTGCTGGGATTTCGCGGGCGTTATCAGGATCCGGTgg < 1:476927/298‑1 (MQ=255) tCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCGCCGTGTCCTGCTGCTGGGATTTCGCGGGCGTTATCAGGATCCGGTGGc > 1:190366/1‑298 (MQ=255) tCCGCTAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCCTGCTGCTGGGATTTCGCGGGCGTTATCAGGATCCGGTggg > 1:46021/1‑297 (MQ=255) cgctAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCCTGCTGCTGGGATTTCGCGGGCGTTATCAGGATCCGGTGGccc < 1:442959/298‑1 (MQ=255) | GGCGGCGCTGCCGCTGCGACTGGAGAACCAGTATTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCGAACGCCTGAAAGATGC‑CGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTG‑GACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCCTGCTGCTGGGATTTCGCGGGCGTTATCAGGATCCGGTGGCCC > CP006584/3010068‑3010656 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |