New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3340296	30 (1.140)	3 (0.120)	3/280	2.9	9.3%	coding (22/978 nt)	yrbG	putative calcium/sodium:proton antiporter
	?	NC_000913	= 3340323	30 (1.220)					coding (49/978 nt)	yrbG	putative calcium/sodium:proton antiporter
Rejected: Frequency below cutoff threshold.

TGGTTAGCGAAAGCTGGCATTTGTTTTACTTTTTAGCCGCATAAAGTCAAAATTAAGCATCCGTTACGGCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCCGCCGCTGATCATCGGCATGACGGTGGTCAGTATTGGTACATCGTTACCAGAAGTCATCGTCTCG  >  NC_000913/3340153‑3340445                                                                                                                                                |                                                                                                                                                      tGGTTAGCGAAAGCTGGCATTTGTTTTACTTTTTAGCCGCATAAAGTCAAAATTAAGCATCCGTTACGGCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAAttgt                                                                                                                                                <  1:306047/151‑1 (MQ=255) tGGTTAGCGAAAGCTGGCATTTGTTTTACTTTTTAGCCGCATAAAGTCAAAATTAAGCATCCGTTACGGCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAAttg                                                                                                                                                 <  1:351237/150‑1 (MQ=255)           aaGCTGGCATTTGTTTTACTTTTTAGCCGCATAAAGTCAAAATTAAGCATCCGTTACGGCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACtt                                                                                                                                      >  1:209949/1‑151 (MQ=255)              cTGGCATTTGTTTTACTTTTTAGCCGCATAAAGTCAAAATTAAGCATCCGTTACGGCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACttt                                                                                                                                     <  2:407467/149‑1 (MQ=255)                       gTTTTACTTTTTAGCCGCATAAAGTCAAAATTAAGCATCCGTTACGGCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTa                                                                                                                           <  1:46717‑M2/150‑2 (MQ=255)                            aCTTTTTAGCCGCATAAAGTCAAAATTAAGCATCCGTTACGGCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTacagtgc                                                                                                                     >  1:11630‑M2/1‑144 (MQ=255)                            aCTTTTTAGCCGCATAAAGTCAAAATTAAGCATCCGTTACGGCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTacagtg                                                                                                                      <  2:286488‑M2/150‑7 (MQ=255)                              tttttAGCCGCATAAAGTCAAAATTAAGCATCCGTTACGGCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTacagtgccg                                                                                                                   >  1:372430‑M2/1‑142 (MQ=255)                                               tCAAAATTAAGCATCCGTTACGGCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGcc                                                                                                  <  1:172546/151‑1 (MQ=255)                                               tCAAAATTAAGCATCCGTTACGGCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGc                                                                                                   <  1:146424/150‑1 (MQ=255)                                                          cATCCGTTACGGCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTc                                                                                        <  1:267070/150‑1 (MQ=255)                                                          cATCCGTTACGGCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTc                                                                                        <  1:314860/150‑1 (MQ=255)                                                          cATCCGTTACGGCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGAAGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTc                                                                                        <  2:96493/150‑1 (MQ=255)                                                              cGTTACGGCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTg                                                                                    >  2:405602/1‑150 (MQ=255)                                                               gTTACGGCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCCACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGc                                                                                   >  2:33096/1‑150 (MQ=255)                                                                ttACGGCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTacagtgccgtagctaaaatcatctaacgtcctttcttcaggta                                                                                 >  2:148542‑M2/1‑108 (MQ=255)                                                                   cGGCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTacagtgccgtagctaaaagcatctaacgtcctttcttcaggtatac                                                                              >  2:37548‑M2/1‑105 (MQ=255)                                                                      cTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTTCTTTTGGTCGTTTacagtgccgtagctaaaagcatctaacgtcctttcttcaggtatactc                                                                            >  2:130574‑M2/1‑102 (MQ=255)                                                                        ttCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTg                                                                         >  1:84969/1‑151 (MQ=255)                                                                             aaaaTCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATc                                                                    <  2:252566/151‑1 (MQ=255)                                                                                        gggACCGGCGAGTATCCCGGAAGAAAGGACTTTAGATGCTTTTAGCTCCGGCACTTTTAATTGTTGGTTTATTTTTGGTCGTTTACAGTGCCGCCCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCCGCCGCTGa                                                          <  2:43177/149‑1 (MQ=255)                                                                                              ggCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCCGCCGCTGATCATCgg                                                   >  2:210806/1‑151 (MQ=255)                                                                                                 gAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTaaacgaccaaaagaaaaccaacaattaacagtgccgtagctaaaagcatctaacgtcctttcttcaggtatactcgccggtccgctgaagattttcagaaag                                                 >  2:130574‑M1/1‑48 (MQ=255)                                                                                                   gTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTaaacgaccaaaagtaaaccaacaattaacagtgccgtagctaaaagcatctaacgtcctttcttcaggtatactcgccggtccgctgaagattttcagaaagccg                                              >  2:37548‑M1/1‑46 (MQ=255)                                                                                                      tcccTGAAGAAAGGACGTTGGAGGCTTTTAGCTACGGCACTGTTAATTGTTGTTTTACTTTTGTTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCCGCCGCTGATCATCGGCATGACgg                                           <  2:396681/149‑1 (MQ=255)                                                                                                      taCCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCCGCCGCTGATCATCGGCATGACgg                                           >  1:288061/1‑151 (MQ=255)                                                                                                      taCCTGAAGAAAGGACGTTAGATGATTTTAGCTACGGCACTGTaaacgaccaaaagtaaaccaacaattaacagtgccgtagctaaaagcatctaacgtcctttcttcaggtatactcgccggtccgctgaagattttcagaaagccgtaa                                           >  2:148542‑M1/1‑43 (MQ=255)                                                                                                        ccTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTTTTCTTTGCCGAACCTTTGGCATCCCGCCGCTGATCATCGGCATGACggtg                                         >  2:389623/1‑151 (MQ=255)                                                                                                                    aCGTTAGATTCTTTTAGCTACGGCACTGTTAATTGTTGGTTTATTTTTGTTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGACCCTTTGGCATCCCGCCGCTGATCATCGGCATGACGGTGGTCAGTATTgg                              <  1:129824/150‑1 (MQ=255)                                                                                                                      tttagttctttttAGCTCCGGCCCTTTTAATTTTTGGTTTCTTTTTGGTCTTTTCCAGTGCCGCCCCCCTGGTTTTTGCCGCGTCTATTCTTTGCCGACCCTTTGGCCTCCCGCCGCTGATCATCGGCATGACGGTGGTCAGTATTGGTAc                           <  2:20584/142‑1 (MQ=255)                                                                                                                      tttAGATGCTTTTAGCTCCGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTCCCGCCCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCCGCCGCTGATCATCGGCATGACGGTGGTCAGTATTGGTAc                           <  1:126230/150‑1 (MQ=255)                                                                                                                      tttAGATGCTTTTAGCTACGGCCCTGTTAATTTTTGGTTTTCTTTTGGTCTTTTCCAGTGCCGACCGCCGGGTTTTTGCCGCTTCTATTCTTTGCCGAACCTTTGGCATCCCGCCGCTGATCATCGGCATGACGGTGGTCAGTATTGGTAc                           <  2:274048/150‑1 (MQ=255)                                                                                                                       ttAGATTCTTTTCGCTACGGCCCTGTTAATTGTTGGTTTACTTTTGGTCTTTTCCAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCCGCCGCTGATCATCGGCATGACGGTGGTCAGTATTGGTAc                           <  2:75673/150‑1 (MQ=255)                                                                                                                       ttAGATGCTTTTAGCTACGGCACTGTTAATTGTTGTTTTACTTTTGGTCGTTTACAGTGCCGCCCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCCGCCGCTGATCATCGGCATGACGGTGGTCAGTATTGGTAc                           <  1:326543/150‑1 (MQ=255)                                                                                                                           aTGCTTTTAGCTACGGCCCTTTTATTTTTTGTTTTCTTTTTGGCCGTTTCCAGTGCCGGCCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCCGCCGCTGATCATCGGCATGACGGTGGTCAGTATTGGTACATCg                       <  2:54884/150‑1 (MQ=255)                                                                                                                             gCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCCGCCGCTGATCATCGGCATGACGGTGGTCAGTATTGGTACATCGTTa                    >  1:108001/1‑151 (MQ=255)                                                                                                                             gCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCCGCCGCTGATCATCGGCATGACGGTGGTCAGTATTGGTACATCGTTa                    >  1:410373/1‑151 (MQ=255)                                                                                                                              cTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCCGCCGCTGATCATCGGCATGACGGTGGTCAGTATTGGTACATCGTTa                    >  1:327847/1‑150 (MQ=255)                                                                                                                                        cGGCACTGTaaacgaccaaaagtaaaccaacaattaacagtgccgtagctaaaagcatctaacgtcctttcttcaggtatactcgccggtccgctgaagattttcagaaagccgtaacggatgcttaattttgactttatgcggctaaaaa         >  1:372430‑M1/1‑9 (MQ=255)                                                                                                                                          gCACTGTaaacgaccaaaagtaaaccaacaattaacagtgccgtagctaaaagcatctaacgtcctttcttcaggtatactcgccggtccgctgaagattttcagaaagccgtaacggatgcttaattttgactttatgcggctaaaaagt       >  1:11630‑M1/1‑7 (MQ=255)                                                                                                                                          gCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCCGCCGCTGATCATCGGCATGACGGTGGTCAGAATTGGTACATCGTTACCAGAAGTCATCg       >  1:122482/1‑151 (MQ=255)                                                                                                                                           cACTGTaaacgaccaaaagtaaaccaacaattaacagtgccgtagctaaaagcatctaacgtcctttcttcaggtatactcgccggtccgctgaagattttcagaaagccgtaacggatgcttaattttgactttatgcggctaaaaagt       <  2:286488‑M1/150‑145 (MQ=255)                                                                                                                                            aCTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCCGCCGCTGATCATCGGCATGACGGTGGTCAGTATTGGTACATCGTTACCAGAAGTCATCGt      >  1:178064/1‑150 (MQ=255)                                                                                                                                                taaacgaccaaaagtaaaccaacaattaacagtgccgtagctaaaagcatctaacgtcctttcttcaggtatactcgccggtccgctgaagattttcagaaagccgtaacggatgcttaattttgactttatgcggctaaaaagtaaaac  <  1:46717‑M1/150‑150 (MQ=255)                                                                                                                                                |                                                                                                                                                      TGGTTAGCGAAAGCTGGCATTTGTTTTACTTTTTAGCCGCATAAAGTCAAAATTAAGCATCCGTTACGGCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCCGCCGCTGATCATCGGCATGACGGTGGTCAGTATTGGTACATCGTTACCAGAAGTCATCGTCTCG  >  NC_000913/3340153‑3340445

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.