Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,793,843 IS2 (–) +5 bp intergenic (‑160/‑140) yibB ← / → hldD YibB family protein, function unknown/ADP‑L‑glycero‑D‑mannoheptose‑6‑epimerase, NAD(P)‑binding

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3187426NA (NA)105 (1.030) 44/296 0.9 100% noncoding (1331/1331 nt) IS2 repeat region
?NC_000913 = 3793847 0 (0.000)intergenic (‑164/‑140) yibB/hldD YibB family protein, function unknown/ADP‑L‑glycero‑D‑mannoheptose‑6‑epimerase, NAD(P)‑binding
* ? NC_000913 3793843 =0 (0.000)125 (1.220) 67/296 0.1 100% intergenic (‑160/‑144) yibB/hldD YibB family protein, function unknown/ADP‑L‑glycero‑D‑mannoheptose‑6‑epimerase, NAD(P)‑binding
?NC_000913 4498181 = NA (NA)noncoding (1/1331 nt) IS2 repeat region

Only 100 of 225 total aligned reads displayed.

ACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATAATTCGAAGGTTACAGTTATGATCA  >  NC_000913/3793694‑3793993
                                                                                                                                                     |                                                                                                                                                      
cgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAc                                                                                                                                                       >  2:378631‑M1/150‑151 (MQ=255)
aCCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGAc                                                                                                                                                       <  1:148186/151‑1 (MQ=255)
  atcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACt                                                                                                                                                      >  2:975205‑M1/148‑150 (MQ=255)
  atcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTa                                                                                                                                                     <  1:545654‑M1/4‑1 (MQ=255)
  atcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTa                                                                                                                                                     >  2:1536350‑M1/148‑151 (MQ=255)
  atcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTa                                                                                                                                                     <  1:294716‑M1/4‑1 (MQ=255)
      tttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTa                                                                                                                                                 <  1:984970‑M1/8‑1 (MQ=255)
          ctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAAc                                                                                                                                             >  2:90104‑M1/140‑151 (MQ=255)
              gtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCaa                                                                                                                                         <  2:874744‑M1/16‑1 (MQ=255)
              gtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCaa                                                                                                                                         <  1:849802‑M1/16‑1 (MQ=255)
                  tacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACt                                                                                                                                      >  1:50033‑M1/132‑150 (MQ=255)
                  tacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACt                                                                                                                                      >  2:565784‑M1/132‑150 (MQ=255)
                        gtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTttgt                                                                                                                               <  1:701137‑M1/26‑1 (MQ=255)
                                 tatTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacat                                                                                                                         <  1:1408785‑M2/148‑28 (MQ=255)
                                        ccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCtt                                                                                                               <  2:802391‑M1/42‑1 (MQ=255)
                                         gAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatca                                                                                                                <  2:474469‑M2/149‑37 (MQ=255)
                                         gAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatca                                                                                                                <  2:1234109‑M2/149‑37 (MQ=255)
                                         gAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatca                                                                                                                <  1:606929‑M2/149‑37 (MQ=255)
                                          aaTGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcactt                                                                                                             <  1:1546884‑M2/151‑40 (MQ=255)
                                          aaTGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcactt                                                                                                             <  2:419217‑M2/151‑40 (MQ=255)
                                          aaTGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcactt                                                                                                             <  2:963903‑M2/151‑40 (MQ=255)
                                          aaTGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcact                                                                                                              >  1:656271‑M2/1‑112 (MQ=255)
                                          aaTGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCAAATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcactt                                                                                                             <  1:590085‑M2/151‑40 (MQ=255)
                                          aaGGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcact                                                                                                              >  1:893207‑M2/1‑112 (MQ=255)
                                            aagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCAc                                                                                                           >  2:719366‑M1/106‑151 (MQ=255)
                                            aagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCAc                                                                                                           >  1:770719‑M1/106‑151 (MQ=255)
                                             gTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaa                                                                                                           <  2:698568‑M2/150‑42 (MQ=255)
                                             gTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcact                                                                                                              >  1:1111290‑M2/1‑109 (MQ=255)
                                               ataCTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacc                                                                                                         <  1:1527040‑M2/150‑44 (MQ=255)
                                               ataCTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacc                                                                                                         <  2:1285481‑M2/150‑44 (MQ=255)
                                               acatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatatgggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCAcc                                                                                                          >  2:632930‑M1/103‑149 (MQ=255)
                                                agtcagatattatccaTTCAAATGCTTCCGTTAATTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacc                                                                                                         >  2:971771‑M2/7‑106 (MQ=255)
                                                 aCTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccat                                                                                                      <  2:208164‑M2/151‑47 (MQ=255)
                                                  tcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTAt                                                                                                     <  1:1021117‑M1/52‑1 (MQ=255)
                                                  tcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTAt                                                                                                     <  1:631046‑M1/52‑1 (MQ=255)
                                                  cTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccatt                                                                                                     <  2:1583807‑M2/151‑48 (MQ=255)
                                                  cTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccatt                                                                                                     <  2:108801‑M2/151‑48 (MQ=255)
                                                    gTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATCTTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccatatatttccagacatctgttatcacttaacccatta                                                                                                    <  2:734432‑M2/150‑49 (MQ=255)
                                                    gTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccatta                                                                                                    <  2:385520‑M2/150‑49 (MQ=255)
                                                    gTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccatta                                                                                                    <  2:1414114‑M2/150‑49 (MQ=255)
                                                    aatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGt                                                                                                   >  1:68124‑M1/98‑151 (MQ=255)
                                                    aatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGt                                                                                                   >  1:1585507‑M1/98‑151 (MQ=255)
                                                     tataTTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattac                                                                                                   >  2:1515178‑M2/1‑101 (MQ=255)
                                                      tcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctgtagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTaa                                                                                                 >  2:342839‑M1/96‑151 (MQ=255)
                                                      tcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTaa                                                                                                 >  1:1440689‑M1/96‑151 (MQ=255)
                                                      atatTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaa                                                                                                 <  1:707677‑M2/151‑52 (MQ=255)
                                                      atatTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaa                                                                                                 <  2:369938‑M2/151‑52 (MQ=255)
                                                      atatTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaa                                                                                                 <  2:664671‑M2/151‑52 (MQ=255)
                                                      atatTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacc                                                                                                         <  1:972260‑M2/143‑44 (MQ=255)
                                                       tattatCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaag                                                                                                <  1:17779‑M2/151‑53 (MQ=255)
                                                          ctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAggg                                                                                             >  2:1436804‑M1/92‑151 (MQ=255)
                                                           tgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTTAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGc                                                                                            >  2:1124730‑M1/91‑151 (MQ=255)
                                                           tgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGc                                                                                            >  2:939840‑M1/91‑151 (MQ=255)
                                                           tgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGc                                                                                            >  1:1009462‑M1/91‑151 (MQ=255)
                                                               aTTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctg                                                                                         <  2:1018511‑M2/150‑60 (MQ=255)
                                                                                atttatCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtgg                                                                       <  1:326161‑M2/151‑78 (MQ=255)
                                                                                atttatCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtgg                                                                       <  2:1491998‑M2/151‑78 (MQ=255)
                                                                                  ttatCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcg                                                                     <  1:1140998‑M2/151‑80 (MQ=255)
                                                                                  ttatCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcg                                                                     <  2:704712‑M2/151‑80 (MQ=255)
                                                                                  ttatCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcg                                                                     <  2:336175‑M2/151‑80 (MQ=255)
                                                                                  aactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGAtggg                                                                     <  1:795469‑M1/84‑2 (MQ=255)
                                                                                    ctagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTAt                                                                   >  2:407032‑M1/66‑151 (MQ=255)
                                                                                    atCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgag                                                                   <  1:278172‑M2/151‑82 (MQ=255)
                                                                                       gtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGAt                                                                <  1:1063004‑M1/89‑1 (MQ=255)
                                                                                          cATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataa                                                             <  1:103757‑M2/151‑88 (MQ=255)
                                                                                            tCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataac                                                            <  1:861352‑M2/150‑89 (MQ=255)
                                                                                            tCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataac                                                            <  2:747875‑M2/150‑89 (MQ=255)
                                                                                                  atcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACAtt                                                      <  2:793450‑M1/99‑1 (MQ=255)
                                                                                                  atcacttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCAACTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACAtt                                                      <  2:863772‑M1/99‑1 (MQ=255)
                                                                                                    ttGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcac                                                   >  2:672752‑M2/1‑54 (MQ=255)
                                                                                                      cttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCgtgt                                                 <  2:1474256‑M1/104‑1 (MQ=255)
                                                                                                      cttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCgtgt                                                 <  2:247564‑M1/104‑1 (MQ=255)
                                                                                                      cttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCgtgt                                                 <  2:1412126‑M1/104‑1 (MQ=255)
                                                                                                      cttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCgtgt                                                 <  1:149228‑M1/104‑1 (MQ=255)
                                                                                                      cttatttaagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCgtgt                                                 <  1:1602026‑M1/104‑1 (MQ=255)
                                                                                                          cTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcg                                             <  1:1252710‑M2/151‑104 (MQ=255)
                                                                                                          cTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcg                                             <  1:728748‑M2/151‑104 (MQ=255)
                                                                                                            taagtgatattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTgaga                                           <  1:411262‑M1/110‑1 (MQ=255)
                                                                                                            aaaGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcgga                                           >  1:913119‑M2/1‑46 (MQ=255)
                                                                                                               gCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccaacgcactatgcggatg                                         <  1:36604‑M2/150‑108 (MQ=255)
                                                                                                                 gatattggttgtctggcgattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGt                                       <  1:1277134‑M1/114‑1 (MQ=255)
                                                                                                                   tattggttgtctggagattcagggggccagtctcACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGtct                                     <  2:459332‑M1/116‑1 (MQ=255)
                                                                                                                   tattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACctc                                                                                                        >  1:78835‑M1/35‑83 (MQ=255)
                                                                                                                   tattggttgtctggagattcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACctc                                                                                                        <  2:78819‑M1/49‑1 (MQ=255)
                                                                                                                    aTTCACATGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccatt                                    <  1:446329‑M2/150‑113 (MQ=255)
                                                                                                                           tGCAAAACCAACATCCGCCATGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataa                            >  1:385627‑M2/1‑31 (MQ=255)
                                                                                                                                   attcagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATAATTc                      >  1:1378293‑M1/19‑149 (MQ=255)
                                                                                                                                      cagggggccagtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATAATTCGAAgg                 <  2:1262636‑M1/136‑1 (MQ=255)
                                                                                                                                              aTGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaa         <  2:899862‑M2/151‑140 (MQ=255)
                                                                                                                                               tGAAGGACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaag        <  2:1141016‑M2/151‑141 (MQ=255)
                                                                                                                                                gtctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATAATTCGAAGGTTACAGTTAt       <  2:1303700‑M1/146‑1 (MQ=255)
                                                                                                                                                  ctaACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATAATTCGAAGGTTACAGTTATGa     >  1:831649‑M1/4‑151 (MQ=255)
                                                                                                                                                   ggACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggtt     <  2:1062289‑M2/150‑144 (MQ=255)
                                                                                                                                                    gACTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggtt     <  2:1035204‑M2/149‑144 (MQ=255)
                                                                                                                                                    aACTAGCTAAAACCCAATCTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATAATTCGAAGGTTACAGTTATGATc   >  1:516424‑M1/2‑151 (MQ=255)
                                                                                                                                                    aACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATAATTCGAAGGTTACAGTTATGATc   >  1:1356411‑M1/2‑151 (MQ=255)
                                                                                                                                                    aACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATAATTCGAAGGTTACAGTTATGATc   >  2:260569‑M1/2‑151 (MQ=255)
                                                                                                                                                    aACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATAATTCGAAGGTTACAGTTATGATc   >  1:1086953‑M1/2‑151 (MQ=255)
                                                                                                                                                    aACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATAATTCGAAGGTTACAGTTATGATc   >  1:518242‑M1/2‑151 (MQ=255)
                                                                                                                                                     aCTAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctt  <  1:1157283‑M2/151‑147 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
ACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATAATTCGAAGGTTACAGTTATGATCA  >  NC_000913/3793694‑3793993

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.