| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 5,159 | 0 | G | A | 47.9% | 39.6 / 51.7 | 72 | intergenic (+139/‑75) | thrC/yaaX | L‑threonine synthase/DUF2502 family putative periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base G (31/6); new base A (0/34); total (31/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.19e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAA > NC_000913/5012‑5309 | catcaGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAAt < 1:72837/151‑1 (MQ=255) gTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATaacaa > 2:1372669/1‑151 (MQ=255) gTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATaacaa > 2:663343/1‑151 (MQ=255) aaaaTCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑cc < 2:1510716/151‑1 (MQ=255) aaTCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑ccg > 1:151401/1‑150 (MQ=255) aTCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGa > 2:591744/1‑151 (MQ=255) aTCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGa > 2:560/1‑151 (MQ=255) aTCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGa > 1:1156474/1‑151 (MQ=255) aTCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGa > 2:1242141/1‑151 (MQ=255) aTCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGa > 2:825871/1‑151 (MQ=255) aTCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGa > 2:818307/1‑151 (MQ=255) aTCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGa > 1:209903/1‑151 (MQ=255) cacAATCAGGCGGGTTTTGTTTTTATGCACCCGTGTTTTTTTAGAAAAAAA‑TTAGGAAAAAAAATA‑ACAGAAAAAAA‑GA‑AAAATTCCTAAATAATGGCGGTAACTTAGAAATTAGGTTGGGGGAAAAAAAAAA‑CCGCCGTTCTCATCGAGt < 2:1487474/149‑1 (MQ=255) cAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAA‑TTATGGCGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGaaa > 1:649962/1‑151 (MQ=255) cAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTaa > 2:17244/1‑151 (MQ=255) aaaaggggCGGGTTTTGTTTTTATGCACCCGGGTTTTTTTAAAAAAAAA‑TTAGGGAAAAAAATG‑AAAGGAAAAAA‑GG‑AAAAATTCAAAAAAAAGGGGGTAATTAAGAGATTAGGATGGGGGAAAAAAACAA‑CCGCCGTTCTCATCGAGTaa < 1:1257629/145‑1 (MQ=255) aTCAGGCGGGGTTTGCTTTTAGCCAGCCGGGTTTTTTTATAAAAAAA‑TTAGGAAAAAAAAGG‑ACAGGAAAAAA‑GA‑AAAAATTCTCAAAAAATGCGGTAATTAAGAAATTAGGTTTGCGGAAAAAACCAA‑CCGCCGTTCTCATCGAGTAAtc < 2:938370/151‑1 (MQ=255) aaggcGGGTTTTCTTTTAAGGCGCCCGGGTTTTTTAAAAAAAAATTTAGGGAAAAAAATG‑ACAGGAAAAAA‑GA‑AAAAATCATAAAAAAAGGCGATAATTTAGAAATTAGGATGGGGGAAAAAAACAC‑CCGCCGTTCTCATCGAGTAAtctc < 2:125298/147‑1 (MQ=255) ggCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCg > 1:301325/1‑151 (MQ=255) cgggttttGTTTTTATGCAGCCCGGTTTTTTTAAGAAAAAA‑TTATGGAAAAAAATG‑ACAGGAAAAAA‑GG‑AAAAATTCTAAAAAAAGGGGGTAACTTAGAGATTAGGATGGGGGAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGa < 1:486394/146‑1 (MQ=255) gggTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGata > 2:597571/1‑151 (MQ=255) gCTTTTATGCAGCCCGGCTTTTTTATGAAGAAA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGAc > 2:353991/1‑150 (MQ=255) cTTTTATGCAGCCCGGCTTTTTTATGAAGAAA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGAcc > 2:1097406/1‑150 (MQ=255) cTTTTATGCAGCCCGGCTTTTTTATGAAGAAA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGAcc > 2:1522810/1‑150 (MQ=255) cTTTTATGCAGCCCGGCTTTTTTATGAAGAAA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGAcc > 2:718038/1‑150 (MQ=255) cTTTTACACACCCCGGTTTTTTTAAAAAAAAA‑TTAGGGAAAAAAAGG‑A‑GGGAAAAAA‑GGAAAAAATTCTAAATAATGCCAGTAATTGAAGGCTGAGAAGCGAGAAAAAAAACCA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGAcc < 1:1014351/150‑1 (MQ=255) tttATGCAGCCCGGCTTTTTTATGAAGAAA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCAt > 1:37549/1‑151 (MQ=255) gcgCCCAGGTTTTTTAAAAAAAAATTTAGGGAAAAAAATG‑ACAGGAAAAAA‑GG‑AAAAATTCACAAAAAAGGGTTTAATTAAGAAATTGGGATTGCGAAAAAAAACAC‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAAc < 2:1203738/147‑1 (MQ=255) gcacccGGGTTTTTTTAGAAAAAA‑ATAAGGAAAAAAAAGAAGAGGAAAAAA‑GA‑AAAAATTCTAAAAAAAGGCGTTAATTTAGAGATTGGGATGGGGAAAAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAAc < 1:325931/146‑1 (MQ=255) cgCCCGTTTTTTTTAAAAAAAAA‑TTAGGGAAAAAAAAG‑ACAGGAAAAAA‑GA‑AAAAATTCTCAAAAAATGCGGTAATTAAAAGATTAGGATTGGGGAAAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGc < 1:1386832/150‑1 (MQ=255) gCTTTTTTATGAAGAAA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGAt > 1:170560/1‑151 (MQ=255) tttttttaaaaaaaa‑TTGAGGAAAAAAATG‑GCCGGGAAAAAGGG‑AAAAATTCCAAAAAAGGGCGGTAACTAAGAGATTAGGTTTGGGAAGAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGAt < 1:804948/138‑1 (MQ=255) ttaaaaaaaaa‑TTAGGGAAAAAAATG‑ACAGGAAAAAA‑GG‑AAAAATTCTAAAAAAAGGGGGTAATTAAGAGATTAGGATGGCGGAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAgg < 1:1139316/143‑1 (MQ=255) ttaaaaaaaaa‑TTAGGGAAAAAAAGG‑AGAGGAAAAAA‑GG‑AAAAATTCTAAAAAAATGCGGTAAATAAGAGATTAGGATGGGGGAGAATAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAgg < 1:811818/143‑1 (MQ=255) ttATGAAAAAA‑TTATGGAAAAAAATG‑ACAGGAAAAAA‑GG‑AAAAATTCTCAATAAATGCGGTAATTTAGAGATTAGTTTTGCGGAAAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAgg < 2:196346/151‑1 (MQ=255) ttATAAAAAAA‑TTAGGAAAAAAAATA‑ACGGGAAAAAA‑GG‑AAAAATTCCAAAAAAAGGCGGTAATTAAGAGATTAGGATTGCGGAAAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAgg < 1:482807/151‑1 (MQ=255) ttATAAAAAAA‑TAAGGAAAAAAAATG‑ACAGGAAAAAA‑GG‑AAAAATTCTAAATAATTGGGGAAATTTAGAGTTTGGGGTTGGGGAAAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAgg < 1:1035038/151‑1 (MQ=255) taataaaaaaa‑TTAGGAAAAAAAAGG‑ACAGGAAAAAA‑GG‑AAAAATCCTAAAAAAATGCGGTAATTTAGAAATTAGGATTGGGAAAAAAAAAAC‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAgg < 2:22484/143‑1 (MQ=255) aagaaA‑TTAGGAAAAAAAATG‑ACAGGAAAAAA‑GG‑AAAATTTTTAAAAAAATGCGGTAACTTAAAGATTAGGTTGGCGGAAAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTaa < 1:591671/151‑1 (MQ=255) aaaaaa‑TTATGGAAAAAAATG‑ACGGGAAAAAA‑GG‑AAAAATTCTAAAAAAAGGGGGAAATTTAGAGATTAGGATTGCGGAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTaa < 1:1115534/148‑1 (MQ=255) agaaA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTaa > 2:20752/1‑150 (MQ=255) aaaa‑TTATGGAAAAAAATG‑ACAGGAAAAAA‑GG‑AAAAATTCACAAAAAAGGCGGTAACTAAAAAATAAGGATTGGGGAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAAcc < 1:451238/150‑1 (MQ=255) aaaa‑TTATGGAAAAAAAGG‑ACAGAGAAAAA‑GG‑AAAAATTCTAAAAAAGTGGGGTAATTTAGAGATTAGGGTTGGGAAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAAcc < 2:258188/150‑1 (MQ=255) aaaa‑TTATGAAAAAAAATG‑AAAGGGAAAAA‑GA‑AGAAATTCTAAATAACGGCATTACCTTAGAGTTTGGGATTGAGAAAAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAAcc < 2:908401/150‑1 (MQ=255) aaaa‑TTAGGGAAAAAAATG‑AAAGGAAAAAA‑GG‑AAAAATTCTAAAAAATTGGGGTAATTTAGAAATTAGGATGGCGAAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAAcc < 1:881228/150‑1 (MQ=255) aaaa‑TTAGGGAAAAAAAGG‑ACAGGAAAAAA‑GG‑AAAAATTCAAAATAAATGCGTTAACTTAGAAATTAGGATGGGGAAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAAcc < 2:372067/150‑1 (MQ=255) ggAAAAAAATG‑ACGGAGAAAAA‑GG‑AAAAATTCAAAAAAAATGCGGTAACTTAGAGATAAGG‑TTGGGGAAAAAAAAAAGCCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGaaa < 2:167030/150‑1 (MQ=255) aaaTG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATg > 1:1206320/1‑150 (MQ=255) aagggaaaaaa‑GG‑AAAATTTCAAAAAAAAGGCGGTAATTAAGAAATTAGGATTGCGGAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATc < 1:284556/144‑1 (MQ=255) aaaggaaaaaa‑gg‑aaaaaTTCAAAAAAAATGCGGTAACTTAGAGATTGGGATGGGGGAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCt < 1:1163236/149‑1 (MQ=255) gggAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTAt > 2:644209/1‑150 (MQ=255) aaaa‑GG‑AAAATTTCTAAAAAAGTGCGTTAATTAAGAGTTTGGGATGGGGGAAAAAAACAC‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTAc < 1:826331/151‑1 (MQ=255) aaaa‑GG‑AAAAATTCACAATAAATGGGGTAACTTAAAAATTAGGATTGGGAAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTAc < 1:927702/151‑1 (MQ=255) aaaa‑GG‑AAAAATTAAAAAAAAAGGGGGAAATTAAGAAATTGGGATGGGGGAAAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTAc < 1:1409004/151‑1 (MQ=255) aaaa‑GG‑AAAAATCCACAATAAATGCGTTAACGAGGAGCTTAGTATGGGGGACAATAGCAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCGGTGAAAAAGATGCAATCTATCGTAc < 2:1518658/151‑1 (MQ=255) aaaa‑GA‑AAAAATTCTAAAAAAATGGGGTACCTAAAAAATGAGGATTGCGGAGAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTAc < 2:383505/151‑1 (MQ=255) aaaaaTTCACAAAAAGGGCGGAAACGAAAAGATGAGGATGGGGAAGAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCAc < 2:1419757/149‑1 (MQ=255) tctaAATAAGTGGTGTAACTGAAAAATGAGGGTTCCGAAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTccc < 2:573970/151‑1 (MQ=255) tcaaaataagggggttAACGTAGATATTAGTAGGGGGAAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTccc < 2:770591/136‑1 (MQ=255) cAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTgg > 1:1014293/1‑151 (MQ=255) tgcgttacatgagagATAAGGATTGAGGAAAAAAACAC‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGt < 1:986514/140‑1 (MQ=255) aaCTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTc > 1:1421319/1‑150 (MQ=255) aCTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTcc > 1:310448/1‑150 (MQ=255) aCTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTcc > 2:1608469/1‑150 (MQ=255) cTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCa > 1:710683/1‑151 (MQ=255) cTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCa > 1:1034741/1‑151 (MQ=255) agaTTAGGATGGGGGAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATgg < 1:494616/149‑1 (MQ=255) aaattgggattgggAAAAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGgc < 1:1305457/148‑1 (MQ=255) gaTTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGgcag > 2:735555/1‑151 (MQ=255) gaTTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGgcag > 2:1262765/1‑151 (MQ=255) tgggttgggggAAAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGcac < 1:597380/142‑1 (MQ=255) tAGGATGGCGAAAAAAAACAC‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGcac < 1:415356/151‑1 (MQ=255) gaATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGaaa > 2:1379227/1‑151 (MQ=255) gaATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGaaa > 2:1408647/1‑151 (MQ=255) gaATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGaaa > 1:436156/1‑151 (MQ=255) gaATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGaaa > 1:355099/1‑151 (MQ=255) | CATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAA‑TTATGGAGAAAAATG‑ACAGGGAAAAA‑GG‑AGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAA > NC_000913/5012‑5309 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |