| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,133,302 | 0 | T | G | 48.1% | 78.1 / 35.4 | 82 | H219P (CAC→CCC) | yghS | putative ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (13/29); new base G (39/0); total (53/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.22e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTAGTTGGGCTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAGTTGCGGC‑GTAACGGCGATTTTTTCCTGTAACGCTGCCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGACGAATCAACAATACGGGCA > NC_000913/3133156‑3133452 | gTAGTTGGGCTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTCg > 2:179468/1‑151 (MQ=255) tAGTTGGGCTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCg > 2:665273/1‑150 (MQ=255) ttGGGCTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCAGCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGccc < 1:827838/150‑1 (MQ=255) gCTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑cc < 2:1041923/150‑1 (MQ=255) gCTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑cc < 2:46035/150‑1 (MQ=255) gcggcgCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGCGCCCCT‑CCAGtt > 1:921015/1‑151 (MQ=255) cggcgCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTc < 2:472702/151‑1 (MQ=255) cggcgCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTc < 2:1206117/151‑1 (MQ=255) ctgTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCAGTTTGGGGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGGa < 1:845475/149‑1 (MQ=255) cgGTTGTACTATTAACAGTTTGCGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTGGCCCCT‑CCactgcactcg > 1:731448/1‑142 (MQ=255) cgGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAggg < 2:625100/151‑2 (MQ=255) cgGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGGa < 1:241215/151‑1 (MQ=255) cgGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGGa < 2:432512/151‑1 (MQ=255) cgGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGGa < 1:912777/151‑1 (MQ=255) cgGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGGa < 2:391084/151‑1 (MQ=255) gTTTTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCCTTTTGGCGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGCTCCCactcacgttaaacat > 1:846010/1‑136 (MQ=255) gTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTCGCCCCT‑CCCGTTCAAgggt > 2:1324389/1‑148 (MQ=255) gTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTCGCCCCA‑CCAGtttcagggtt > 1:536314/1‑143 (MQ=255) gTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGCGCCCCT‑CCCGTTCAAAGA‑t > 2:1378604/1‑150 (MQ=255) gTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGCGCCCCT‑CCCGGTCaaagga > 2:1136496/1‑146 (MQ=255) gTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGCGCCCAT‑CCatgtcaccgatt > 1:634792/1‑140 (MQ=255) ttGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGGA‑Tc < 1:4371/150‑1 (MQ=255) ttGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGGA‑Tc < 1:640727/150‑1 (MQ=255) gTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGCGCCCCT‑CCCGTTTAAAGA‑TCttt > 1:1191496/1‑151 (MQ=255) aCTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTATTGACGCTTGCAGAATTTCATCGGCGTGGCGTTCCCCCT‑CCAGCTccacgtacctttt > 1:148650/1‑139 (MQ=255) aCTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGGTGCCCAT‑CCAGTTTAAGGA‑TCttttt > 1:1248153/1‑149 (MQ=255) aCTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTCGCCCCT‑CCCGTTCAAGGA‑TCtttt > 2:363865/1‑149 (MQ=255) cTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGCGCCCCC‑CCACGTCAAGGaatttttcg > 2:1210957/1‑143 (MQ=255) aTTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGTGCCCAT‑CCCCTTCAATGAGTCtttttc > 1:570144/1‑147 (MQ=255) tAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCAt < 2:102117/151‑1 (MQ=255) cAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCCC‑CCCGTTCAAGGG‑TCttttttcccttgg > 1:1435162/1‑141 (MQ=255) gtttgagtttgTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGCGCCCAT‑CCAGTTCAAGGA‑TCTTTTTG‑CCCTTGAAt > 2:252619/1‑151 (MQ=255) gagtttgTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCCT‑CCCGTTCAAGTA‑TCTTTGCG‑GCCTTGAATggtt > 1:440825/1‑148 (MQ=255) gagtttgTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTCGCCCCT‑CCCGTTCAAGGG‑TCTTTTCG‑CCATTGCATGtta > 2:1408584/1‑149 (MQ=255) agtttgTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTCGCCCAT‑CCAATTCAAGGA‑TCTTTTTG‑CCATTTaaaggccg > 1:805727/1‑145 (MQ=255) tttgTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAg < 2:1076422/149‑1 (MQ=255) ttgTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGGCGCCCCT‑CCAGTCCAACGA‑GCTTTGCG‑CCCTTGAATGTCAGTTg > 1:386872/1‑151 (MQ=255) ttgTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTTTCCCAT‑CCCGTTCCAGGG‑TATTTTCG‑CCCTTTTATGTCaagtg > 1:919243/1‑147 (MQ=255) ttgTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGCAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCCT‑ACCGCTACCGGA‑TCTTTGCG‑TCATACAATTTCAGtcg > 1:1065024/1‑149 (MQ=255) tAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGGA‑TCTTTGTG‑CCCTTGTATGTTAGTTgcgg > 1:185165/1‑151 (MQ=255) gTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGGCGCCCCT‑TCACGTTAAGGG‑TCTTTGGG‑GCCTTGTATGTCAGGTgggggg > 2:860672/1‑149 (MQ=255) tGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAGTTgcggc‑g < 2:1196939/150‑1 (MQ=255) ttCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGCGCCCCT‑CCCGCTCCAGGA‑TCTTTTCG‑CCATTGGATGTCAGGTGCGGC‑GGAACGGCgg > 1:1208948/1‑150 (MQ=255) cGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCCT‑CCCGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAGTTGCGGC‑GTAAAGGGGAtt > 2:850526/1‑151 (MQ=255) cGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTCGCCCCT‑CCAGTTTAAAGA‑TCTTTTCG‑CCCTTTGATTTTAGTTtcgggggaaagggggtt > 2:862917/1‑138 (MQ=255) aaaTCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTCGCCCCT‑CCCCTTCAAGGG‑TCTTTTCG‑CCCTTTAATGTTAGTTGCGGG‑GGAACGGCGGtttttt > 2:191445/1‑151 (MQ=255) aaaTCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGTGCCCCA‑CCAGGTCAAGGG‑TTTTTTTG‑GCATTGTATGTGCGTTGGGGC‑GGTAAGGGGAgttttt > 1:1195263/1‑151 (MQ=255) atcatcCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCCC‑CCCGTTCAAGGA‑TCTTTTCG‑CCCTTGAATGTCAGTTGCGGC‑GGAAAGGCGAttttttt > 2:697758/1‑149 (MQ=255) tcCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGCGCCCCT‑CCCGTTCCAAGA‑TCTTTTCG‑CCCTTTAATGTCAGTTGCGGC‑GGAACGGCGGTTTTTTTCTTTa > 2:417069/1‑151 (MQ=255) tcCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGCGCCCCT‑CCCGTTCAAAGA‑TTTTTTCGCCCTTTGAATG‑CAGTTTCGGG‑GTAACGGCGGTTTTTTTCTGTa > 2:307637/1‑151 (MQ=255) ccccTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTCGCCCCT‑CCCGTTTAAGGA‑TCTTTTCG‑CCATTTAATGTCAGTTGGGGG‑GGAACGGGGGTTTTTTTCTGtta > 2:600926/1‑149 (MQ=255) ccccTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTCGCCCCT‑CCAGTTCCAAGA‑ATTTTGCG‑CCATTTAATGTCAGTCGCGGC‑GGAAAGGCGGTTTTTTTCTTTaa > 2:1360857/1‑151 (MQ=255) ccccTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGCGCCCCT‑CCCGTTTAAGGA‑TCTTTTCG‑CCATTGAAAGTCAGTTGCGGC‑GGAAAGGGGATTTTTTTCtttta > 2:553275/1‑147 (MQ=255) ccccTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGCCCCCCT‑CCAGTTCCAAGA‑TCTTTTCG‑CCCTTTGATGTCAGGTGCGGC‑GGAACGGCGGCTTTTTTCtttta > 2:401368/1‑147 (MQ=255) cccTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGCGCCCCA‑CCCCTTCAAGGG‑GCTTTTGG‑CCATTTAATGTCAGTTGCGGC‑GGAACGGGGGTTTTTTTCttttaa > 2:395918/1‑146 (MQ=255) ccTATCCATTTTGGTGATCTGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTTGACCATCCCGGTTCAA‑GA‑TCTTTTTG‑CCACTTTACGCCAGTTGCGGG‑GTCAAGGCGCATTTTTCCTGTAGCg > 1:863177/1‑151 (MQ=255) cTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAGTTGCGGC‑GTAACGGCGATTTTTTCCTGTAACGc < 1:749749/151‑1 (MQ=255) ccATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGCGCCCCT‑CCCGGTCAAGGA‑TCTTTTCG‑CCCTTTAATGTCAGTTTGGGG‑GGAACGGCGGTTTTTTTCttttaacccgc > 2:1133816/1‑140 (MQ=255) aTTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTGGCCCAT‑CCCGTTCAAGGG‑TCTTTGTG‑CCATTGAATGGCAGTTGCGGC‑GTAACGGCGATTTTTTTCTGTTATGCTGcccg > 1:271795/1‑149 (MQ=255) aTTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGCGCCCAT‑TCAAGTGAAAGG‑TATTTTCG‑GCCTTGTAAGTGAATTGGGGCGGGAACGCGGATTTTTTCCTTTAAGCCTGcag > 1:688472/1‑149 (MQ=255) ttGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGCGCCCCT‑CCAGTTCCAGGA‑TCTTTGTG‑CCATTGAATGTCCGTTGCGGC‑GGAAAGGGGATTTTTTTCTTTAACGCTGCCCGTtg > 2:926623/1‑151 (MQ=255) tGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAGTTGCGGC‑GTAACGGCGATTTTTTCCTGTAACGCTGCCAGTtgg < 2:796801/151‑1 (MQ=255) tGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAGTTGCGGC‑GTAACGGCGATTTTTTCCTGTAACGCTGCCAGTtgg < 2:974265/151‑1 (MQ=255) tGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAGTTGCGGC‑GTAACGGCGATTTTTTCCTGTAACGCTGCCAGTtgg < 1:1439288/151‑1 (MQ=255) cggcgTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGGGCCCCT‑CCAGTTCAAAGA‑TCTTTTCG‑CCCTTTAATGTCAGTTGGGGG‑GGAAAGGGGGTTTTTTTCTTTAAAGCCGCCCGGTGGGGGGCAGGGTTTcgcg > 2:28935/1‑150 (MQ=255) gcgTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGCGCCCCT‑CCACTTCAAGGA‑TCTTTTCG‑CCCTTTAATGTCAGTTTCGGC‑GTAACGGCGATTTTTTTCTTTAAAGCTGCCAGTTTGTGGTCAGGTTTATGCGCaa > 1:1074497/1‑151 (MQ=255) gAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTCGCCCAT‑CCAGTTCAAGGA‑TCTTTTCG‑CCATTTAATGTCAGTTGCGGG‑GTAACGGCGGTTTTTTTCTGTAACGCCGCCCGTTTGGGGTCCGGGTTTCGCGCAAAcg > 2:1122870/1‑150 (MQ=255) gAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAGTTGCGGG‑GTAACGGCGGTTTTTTTCTGTAACGCTGCCCGTTGGGGGGCAGGGTTTCGCGCaaaagg > 2:1234819/1‑148 (MQ=255) aTTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGCGCCCCT‑CCCGTTCAAGGA‑TCTTTTTG‑GCATTGGATGTGAGCTGGGGC‑GGAACGGCGGTTTTTTTCCTTAACGCTGCCCGGTGGTGGGGCGGTTTACGCGCAAACGCgg > 1:314444/1‑151 (MQ=255) gTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTCGCCCAT‑CCACTTCAAGGA‑TCTTTTCG‑CCATTTAAATTTAGTTGCGGG‑GTAAAGGGGGTTTTTTTCTGTAAACCCGCCCCTTGGGGGGCAGGGTTTCGCGCAAACGCGGGTttttt > 2:803965/1‑150 (MQ=255) tAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAGTTGCGGC‑GTAACGGCGATTTTTTCCTGTAACGCTGCCAGTTGGTGGTCAGGTTTACGCGCAATCGCGGTTTGTtc < 1:744215/150‑1 (MQ=255) tGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAGTTGCGGC‑GTAACGGCGATTTTTTCCTGTAACGCTGCCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTtcatc < 1:541538/150‑1 (MQ=255) cGCTTGCAGAATTTCATCGGCGGGGTGGCGCCCAT‑CCAGGTCAAGGA‑TCTTTGCG‑GCCTTGAAAGTCAGTTGCGGG‑GGGACGGCGGTTTTTTTTTGTAACGCCGCCAGGTGGGGGGCGGGGTTACGCGCAAACGCGGTTTGGTTATCAATg > 1:913062/1‑151 (MQ=255) cTTGCAGGATTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAGTTGCGGC‑GTAACGGCGATTTTTTCCTGTAACGCTGCCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGc < 1:1083159/150‑1 (MQ=255) aaTTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAGTTGCGGC‑GTAACGGCGATTTTTTCCTGTAACGCTGCCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGa < 2:542646/148‑1 (MQ=255) aaTTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAGTTGCGGC‑GTAACGGCGATTTTTTCCTGTAACGCTGCCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGAc < 1:1135957/149‑1 (MQ=255) aaTTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGCA‑TCTTTGCG‑CCATTGAATGTCAGTTGCGCC‑GTAACGGCGATTTTTTCCTGTAACGCTGCCAGTTGGTGGTCAGGTTTACTCGCAAACTCGGTTTGTTCATCAATGCCAAGACg < 1:902797/150‑1 (MQ=255) ttCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAGTTGCGGC‑GTAACGGCGATTTTTTCCTGTAACGCTGCCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGACGAATc < 2:1323362/151‑1 (MQ=255) cggGGTGTCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAGTTGCGGC‑GTAACGGCGATTTTTTCCTGTAACGCTGCCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGACGAATCAACAATAc < 2:106046/151‑1 (MQ=255) cggGGTGTCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAGTTGCGGC‑GTAACGGCGATTTTTTCCTGTAACGCTGCCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGACGAATCAACAATAc < 1:239789/151‑1 (MQ=255) gggTGTCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAGTTGCGGC‑GTAACGGCGATTTTTTCCTGTAACGCTGCCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGACGAATCAACAATACgg > 2:452175/1‑151 (MQ=255) gggTGTCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAGTTGCGGC‑GTAACGGCGATTTTTTCCTGTAACGCTGCCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGACGAATCAACAATACgg > 2:277276/1‑151 (MQ=255) gtgtCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAGTTGCGGC‑GTAACGGCGATTTTTTCCTGTAACGCTGCCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGACGAATCAACAATACggg > 1:815210/1‑150 (MQ=255) gtgtCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAGTTGCGGC‑GTAACGGCGATTTTTTCCTGTAACGCTGCCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGACGAATCAACAATACggg < 2:1022058/150‑1 (MQ=255) tgtCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAGTTGCGGC‑GTAACGGCGATTTTTTCCTGTAACGCTGCCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGACGAATCAACAATACGGGCa < 1:925318/151‑1 (MQ=255) tgtCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAGTTGCGGC‑GTAACGGCGATTTTTTCCTGTAACGCTGCCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGACGAATCAACAATACGGGCa < 2:700937/151‑1 (MQ=255) | GTAGTTGGGCTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCAT‑CCAGTTCAAGGA‑TCTTTGCG‑CCATTGAATGTCAGTTGCGGC‑GTAACGGCGATTTTTTCCTGTAACGCTGCCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGACGAATCAACAATACGGGCA > NC_000913/3133156‑3133452 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |