Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,420,038	T→A	P68P (CCA→CCT)	racR ←	Rac prophage; putative DNA‑binding transcriptional regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,420,038	0	T	A	100.0%	381.2 / NA	97	P68P (CCA→CCT)	racR	Rac prophage; putative DNA‑binding transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (51/46);  total (51/46)

TAGCATTTCCAGATAACAGGAAAGCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCTGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTGCGACCTCCGCCTTTGATTTGACGGATCCCGATGC  >  NC_000913/1419893‑1420184                                                                                                                                                  |                                                                                                                                                   tAGCATTTCCAGATAACAGGAAAGCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGAc                                                                                                                                                >  1:115155/1‑150 (MQ=255) tAGCATTTCCAGATAACAGGAAAGCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGAc                                                                                                                                                <  1:360163/150‑1 (MQ=255)             aTAACAGGAAAGCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATc                                                                                                                                      <  1:1356702/148‑1 (MQ=255)              tAACAGGAAAGCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCagaa                                                                                                                                  >  2:309762/1‑151 (MQ=255)                   ggAAAGCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCagaaaagaa                                                                                                                             >  1:80808/1‑151 (MQ=255)                    gAAAGCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCagaaaagaaa                                                                                                                            >  2:1192382/1‑151 (MQ=255)                       aGCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACg                                                                                                                          >  2:1051465/1‑150 (MQ=255)                       aGCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGACCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACg                                                                                                                          >  1:1452763/1‑150 (MQ=255)                        gCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGc                                                                                                                         >  2:1200170/1‑150 (MQ=255)                           aCAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATa                                                                                                                     >  1:1030059/1‑151 (MQ=255)                               tCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTAGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTc                                                                                                                 <  1:674020/151‑1 (MQ=255)                                  ctctTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACCACATCAGAAAAGAAACGCCATAATTCTgg                                                                                                              <  1:92820/151‑1 (MQ=255)                                  ctctTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTgg                                                                                                              >  1:294006/1‑151 (MQ=255)                                  ctctTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTgg                                                                                                              >  1:1348496/1‑151 (MQ=255)                                     ttATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAg                                                                                                           <  1:686919/151‑1 (MQ=255)                                      tATTTCATCCGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAATCCCCCAATGCTCAGGACCAACAACATCAGCAAAGAAACGCCATAATTCTGGAAGt                                                                                                          >  1:131793/1‑151 (MQ=255)                                      tATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGt                                                                                                          >  1:641213/1‑151 (MQ=255)                                        tttCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGttt                                                                                                        >  2:1442995/1‑151 (MQ=255)                                           catcaGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTAt                                                                                                      >  1:727616/1‑150 (MQ=255)                                            atcaGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTAt                                                                                                      >  2:662155/1‑149 (MQ=255)                                            atcaGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTAt                                                                                                      >  1:586981/1‑149 (MQ=255)                                            atcaGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCt                                                                                                    <  2:915850/151‑1 (MQ=255)                                            atcaGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCt                                                                                                    <  2:751443/151‑1 (MQ=255)                                                  ggCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACtt                                                                                              >  1:596246/1‑151 (MQ=255)                                                      gctTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATag                                                                                          >  2:1029436/1‑151 (MQ=255)                                                      gctTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATag                                                                                          >  2:1491683/1‑151 (MQ=255)                                                       ctTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATag                                                                                          <  2:776995/150‑1 (MQ=255)                                                       ctTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATag                                                                                          <  2:1173464/150‑1 (MQ=255)                                                        tggATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATagag                                                                                        <  1:502402/149‑1 (MQ=255)                                                         tGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATagag                                                                                        >  1:1318496/1‑150 (MQ=255)                                                          gATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGc                                                                                       >  2:312135/1‑150 (MQ=255)                                                           aTAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGcc                                                                                      <  1:168420/150‑1 (MQ=255)                                                           aTAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGcc                                                                                      <  2:1206686/150‑1 (MQ=255)                                                                ggTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCtt                                                                                >  2:515761/1‑151 (MQ=255)                                                                    gttTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAAt                                                                             >  2:435652/1‑150 (MQ=255)                                                                     tttATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATcc                                                                           <  2:516635/151‑1 (MQ=255)                                                                     tttATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATcc                                                                           <  1:1117480/151‑1 (MQ=255)                                                                     tttATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATc                                                                            <  1:63690/150‑1 (MQ=255)                                                                     tttATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATc                                                                            <  1:653299/150‑1 (MQ=255)                                                                     tttATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATc                                                                            <  2:1330430/150‑1 (MQ=255)                                                                     tttATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATc                                                                            <  2:1172519/150‑1 (MQ=255)                                                                     tttATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATc                                                                            <  2:1137045/150‑1 (MQ=255)                                                                     tttATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATc                                                                            <  1:856696/150‑1 (MQ=255)                                                                     tttATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTGCTTAATc                                                                            <  1:248984/150‑1 (MQ=255)                                                                        atatCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGt                                                                        >  1:692552/1‑151 (MQ=255)                                                                               aaaGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAAt                                                                 <  2:825078/151‑1 (MQ=255)                                                                               aaaGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAAt                                                                 <  2:115197/151‑1 (MQ=255)                                                                               aaaGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAAt                                                                 <  2:729369/151‑1 (MQ=255)                                                                               aaaGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAAt                                                                 <  2:748123/151‑1 (MQ=255)                                                                                aaGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAAtt                                                                >  2:564334/1‑151 (MQ=255)                                                                                aaGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAAtt                                                                >  1:1219904/1‑151 (MQ=255)                                                                                aaGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAAtt                                                                >  2:230863/1‑151 (MQ=255)                                                                                aaGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAAtt                                                                >  1:1414190/1‑151 (MQ=255)                                                                                  gTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGa                                                              >  1:1258179/1‑151 (MQ=255)                                                                                   ttCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTg                                                               <  2:983269/149‑1 (MQ=255)                                                                                   ttCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGAt                                                             <  1:595084/151‑1 (MQ=255)                                                                                     cACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGAtgg                                                           <  1:10866/151‑1 (MQ=255)                                                                                        tttttGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGAtggtgg                                                        <  1:457037/151‑1 (MQ=255)                                                                                         ttttGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATggtggt                                                       >  2:1427208/1‑151 (MQ=255)                                                                                                   gAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATcc                                                                           <  2:717765/121‑1 (MQ=255)                                                                                                   gAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATcc                                                                           >  1:717348/1‑121 (MQ=255)                                                                                                   gAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTaa                                             >  2:755845/1‑151 (MQ=255)                                                                                                   gAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTaa                                             >  1:274818/1‑151 (MQ=255)                                                                                                    aaTTGGTGGGGGTGGGTATGGGGTATTCGTTAAG‑CCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAg                                           <  1:1350321/151‑1 (MQ=255)                                                                                                     aTTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTTCTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAg                                           <  2:753469/151‑1 (MQ=255)                                                                                                     aTTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAg                                           <  2:1323380/151‑1 (MQ=255)                                                                                                      ttGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGt                                          <  2:587252/151‑1 (MQ=255)                                                                                                      ttGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGt                                          <  2:652422/151‑1 (MQ=255)                                                                                                      ttGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGt                                          <  2:743619/151‑1 (MQ=255)                                                                                                      ttGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGt                                          <  1:977102/151‑1 (MQ=255)                                                                                                      ttGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGt                                          <  1:260486/151‑1 (MQ=255)                                                                                                         gtggGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTgg                                        <  1:606962/150‑1 (MQ=255)                                                                                                         gtggGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTgg                                        <  2:1050862/150‑1 (MQ=255)                                                                                                             gggTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTg                                    >  1:423865/1‑150 (MQ=255)                                                                                                             gggTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTg                                    >  2:1055365/1‑150 (MQ=255)                                                                                                                ttGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTGCGa                                 <  2:582299/150‑1 (MQ=255)                                                                                                                 tGGTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTGCGAcc                               <  2:846492/151‑1 (MQ=255)                                                                                                                  ggTATGGGGTATTCGTTAATCCCCCAGTTCTCAGGACCAACAACATCCGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTAATAGAGCCTTTCTTAATCCAGTCATAAATTGCTGGTGGTTGGTCTTTACAGTGGCGTGCgcc                                >  1:618613/1‑147 (MQ=255)                                                                                                                  ggTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTGCGAc                                >  1:1005860/1‑149 (MQ=255)                                                                                                                  ggTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTGCGAc                                >  1:1210266/1‑149 (MQ=255)                                                                                                                  ggTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTGCGAc                                >  1:152946/1‑149 (MQ=255)                                                                                                                   gTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTGCGACCt                              >  1:719827/1‑150 (MQ=255)                                                                                                                   gTATGGGGTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTGCGACCt                              >  2:370665/1‑150 (MQ=255)                                                                                                                        gggTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTGCGACCTCCGcc                         <  2:1297117/150‑1 (MQ=255)                                                                                                                        gggTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTGCGACCTCCGcc                         <  2:1145170/150‑1 (MQ=255)                                                                                                                        gggTATTCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTGCGACCTCCGcc                         <  2:808501/150‑1 (MQ=255)                                                                                                                              tCGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTGCGACCTCCGCCtttgatt                  >  1:693529/1‑151 (MQ=255)                                                                                                                               cGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTGCGACCTCCGCCtttgattt                 >  1:841950/1‑151 (MQ=255)                                                                                                                               cGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTGCGACCTCCGCCtttgattt                 >  2:744846/1‑151 (MQ=255)                                                                                                                               cGTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTGCGACCTCCGCCtttgattt                 >  1:582708/1‑151 (MQ=255)                                                                                                                                gTTAAGCCCCCAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTGCGACCTCCGCCtttgatttg                >  2:175195/1‑151 (MQ=255)                                                                                                                                       ccccAATGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTGCGACCTCCGCCTTTGATTTGACGGAt          >  2:581922/1‑150 (MQ=255)                                                                                                                                             tGCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTGCGACCTCCGCCTTTGATTTGACGGATCCCGATg   <  1:165862/151‑1 (MQ=255)                                                                                                                                              gCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTTTTAATCCATTCTTAATTTGATGGTGGTTGGACTTTAAAGTGGCGTGCGACCTCCGCCTTTGATTTGACGGATCCCGATg   >  2:1412415/1‑150 (MQ=255)                                                                                                                                              gCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTGCGACCTCCGCCTTTGATTTGACGGATCCCGATg   >  1:254623/1‑150 (MQ=255)                                                                                                                                              gCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTGCGACCTCCGCCTTTGATTTGACGGATCCCGATg   >  1:1175606/1‑150 (MQ=255)                                                                                                                                              gCTCAGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTGCGACCTCCCCCTTTGATTTGACGGATCCCGATg   >  1:934011/1‑150 (MQ=255)                                                                                                                                               ctcaGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTGCGACCTCCGCCTTTGATTTGACGGATCCCGATGc  <  1:270236/150‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                   TAGCATTTCCAGATAACAGGAAAGCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCTGGACCAACAACATCAGAAAAGAAACGCCATAATTCTGGAAGTTTATCTTTACTTATAGAGCCTTTCTTAATCCAGTCATAAATTGATGGTGGTTGGACTTTAAAGTGGCGTGCGACCTCCGCCTTTGATTTGACGGATCCCGATGC  >  NC_000913/1419893‑1420184

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑