| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3880655 | 124 (1.110) | 13 (0.120) | 10/278 | 6.6 | 10.0% | coding (567/1074 nt) | recF | gap repair protein |
| ? | NC_000913 | = 3880717 | 118 (1.130) | coding (505/1074 nt) | recF | gap repair protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
TTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3880505‑3880655‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccaggtgACACGTTACGAACAGCTACGCCCGTGGGATAAAGAGCTGATCCCGCTGGCGGAGCAAATCAGCACCTGGCGCGCGGAGTATAGCGCCGGTATCGCGGCCGATATGGCTGATACCTGTAAGCAATTTCTCCCTGAGTTTTCTCTGACTT < NC_000913/3880717‑3880570 TTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTG < 2:508518/151‑1TTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTG < 2:1096086/151‑1 ATTGCTTACAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGACACGTTACGAACAGCTACGCCCGTGGGATAACGAGCTGATCCCGCTGGCGGAGCAAATCAGCACCTGGCGCGCGGAGCATAGGGCCGG > 1:272641/1‑151 GCTTACAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGACACGTTACGAACAGCTACGCCCGTGGGATAAAGAGCTGATCCCGCTGGCGGAGCAAATCAGCACCTGGCGCGCGGAGTATAGCGCCGGTAT > 2:828359/1‑151 CAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGACACGTTACGAACAGCTACGCCCGTGGGATAAAGAGCTGATCCCGCTGGCGGAGCAAATCAGCACCCGGCGCGCGGAGGATAGCGCCGGTATCGCGG > 2:681570/1‑151 GGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGACACGTTACGAACCGCTACGCCCGTGGGATAAAGAGCTGATCCCGCTGGCGGAGCAAATCAGCACCTGGCGCGCGGAGTATAGCGCCGGGATCGCGGC > 2:1459596/1‑150 AGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGACACGTTACGAACAGCTACGCCCGTGGGATAAAGAGCTGATCCCGCTGGCGGAGCAAATCAGCACCTGGCGCGCGGAGTATAGCGCCGGTATCGCGGCCGATATG > 2:463301/1‑151 GCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGACACGTTACGAACAGCTACGCCCGTGGGATAAAGAGCTGATCCCGCTGGCGGAGCAAATCAGCACCTGGCGCGCGGAGTATAGCGCCGGTATCGCGGCCGATATGG > 2:543319/1‑151 GCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGACACGTTACGAACAGCTACGCCCGTGGGATAAAGAGCTGATCCCGCTGGCGGAGCAAATCAGCACCTGGCGCGCGGAGTATAGCGCCGGTATCGCGGCCGATATGG > 2:177900/1‑151 GCTATACTCCGCGCGCCAGGTGACACGTTACGAACAGCTACGCCCGTGGGATAAAGAGCTGATCCCGCTGGCGGAGCAAATCAGCACCTGGCGCGCGGAGTATAGCGCCGGTATCGCGGCCGATATGGCTGATACCTGTAAGCAATTTCT > 2:1391516/1‑150 CTATACTCCGCGCGCCAGGTGACACGTTACGAACAGCTACGCCCGTGGGATAAAGAGCTGATCCCGCTGGCGGAGCAAATCAGCACCTGGCGCGCGGAGTATAGCGCCGGTATCGCGGCCGATATGGCTGATACCTGTAAGCAATTTCTC > 1:1242782/1‑150 ATACTCCGCGCGCCAGGTGACACGTTACGAACAGCTACGCCCGTGGGATAAAGAGCTGATCCCGCTGGCGGAGCAAATCAGCACCTGGCGCGCGGAGTATAGCGCCGGTATCGCGGCCGATATGGCTGATACCTGTAAGCAATTTCTCC > 2:1367220/1‑149 ATACTCCGCGCGCCAGGTGACACGTTACGAACAGCTACGCCCGTGGGATAAAGAGCTGATCCCGCTGGCGGAGCAAATCAGCACCTGGCGCGCGGAGTATAGCGCCGGTATCGCGGCCGATATGGCTGATACCTGTAAGCAATTTCTCC > 2:1555465/1‑149 ATACTCCGCGCGCCAGGTGACACGTTACGAACAGCTACGCCCGTGGGATAAAGAGCTGATCCCGCTGGCGGAGCAAATCAGCACCTGGCGCGCGGAGTATAGCGCCGGTATCGCGGCCGATATGGCTGATACCTGTAAGCAATTTCTCC > 1:387913/1‑149 CTCCGCGCGCCAGGTGACACGTTACGAACAGCTACGCCCGTGGGATAAAGAGCTGATCCCGCTGGCGGAGCAAATCAGCACCTGGCGCGCGGAGTATAGCGCCGGTATCGCGGCCGATATGGCTGATACCTGTAAGCAATTTCTCCCTGAG > 1:845815/1‑151 GCGCCAGGTGACACGTTACGAACAGCTACGCCCGTGGGATAAAGAGCTGATCCCGCTGGCGGAGCAAATCAGCACCTGGCGCGCGGAGTATAGCGCCGGTATCGCGGCCGATATGGCTGATACCTGTAAGCAATTTCTCCCTGAGTTTT > 2:605216/1‑149 GCGCCAGGTGACACGTTACGAACAGCTACGCCCGTGGGATAAAGAGCTGATCCCGCTGGCGGAGCAAATCAGCACCTGGCGCGCGGAGTATAGCGCCGGTATCGCGGCCGATATGGCTGATACCTGTAAGCAATTTCTCCCTGAGTTTT > 1:145779/1‑149 AGGTGACACGTTACGAACAGCTACGCCCGTGGGATAAAGAGCTGATCCCGCTGGCGGAGCAAATCAGCACCTGGCGCGCGGAGTATAGCGCCGGTATCGCGGCCGATATGGCTGATACCTGTAAGCAATTTCTCCCTGAGTTTTCTCTGA > 1:816273/1‑150 AGGTGACACGTTACGAACAGCTACGCCCGTGGGATAAAGAGCTGATCCCGCTGGCGGAGCAAATCAGCACCTGGCGCGCGGAGTATAGCGCCGGTATCGCGGCCGATATGGCTGATACCTGTAAGCAATTTCTCCCTGAGTTTTCTCTGA > 1:633259/1‑150 GGTGACACGTTACGAACAGCTACGCCCGTGGGATAAAGAGCTGATCCCGCTGGCGGAGCAAATCAGCACCTGGCGCGCGGAGTATAGCGCCGGTATCGCGGCCGATATGGCTGATACCTGTAAGCAATTTCTCCCTGAGTTTTCTCTGA > 1:1708356/1‑149 GTGACACGTTACGAACAGCTACGCCCGTGGGACAAAGAGCTGATCCCGCTGGCGGAGCAAATCAGCACCTGGCGCGCGGAGTATAGCGCCGGTATCGCGGCCGATATGGCTGATACCTGTAAGCAATTTCTCCCTGAGTTTTCTCTGACTT > 2:1006121/1‑151 TTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3880505‑3880655‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccaggtgACACGTTACGAACAGCTACGCCCGTGGGATAAAGAGCTGATCCCGCTGGCGGAGCAAATCAGCACCTGGCGCGCGGAGTATAGCGCCGGTATCGCGGCCGATATGGCTGATACCTGTAAGCAATTTCTCCCTGAGTTTTCTCTGACTT < NC_000913/3880717‑3880570 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |