Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,386,8620GA66.1% 92.2 / 112.4 121intergenic (+31/‑72)yfbL/yfbMputative M28A family peptidase/DUF1877 family protein
Reads supporting (aligned to +/- strand):  ref base G (7/34);  new base A (80/0);  total (87/34)
Fisher's exact test for biased strand distribution p-value = 1.73e-23
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.64e-13

Only 100 of 121 total aligned reads displayed.

CTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTT  >  NC_000913/2386716‑2387010
                                                                                                                                                     |                                                                                                                                                                  
cTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGAc                                                                                                                                                                <  1:615411/151‑1 (MQ=255)
  ttttATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTTCCGAAAAAAAGACaa                                                                                                                                                              >  1:625204/1‑150 (MQ=255)
   tttATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATg                                                                                                                                                             <  2:1143185/151‑1 (MQ=255)
         gTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTTCCAAAAAAAGGACATTAACatt                                                                                                                                                      >  2:484774/1‑151 (MQ=255)
         gTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTTCAGAAAAAAAGACAAGgacaat                                                                                                                                                      >  2:1721003/1‑149 (MQ=255)
         gTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCCGAAAAAACGACATAcaacat                                                                                                                                                       >  1:1733441/1‑147 (MQ=255)
         gTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCCGAAAAAAAGAAAAGCACatt                                                                                                                                                      >  2:333447/1‑151 (MQ=255)
         gTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGTCCGAAAAAAAGACAAACACatt                                                                                                                                                      >  1:515186/1‑151 (MQ=255)
         gTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGCCCGAAAAAAAGACATGCACatt                                                                                                                                                      >  2:347581/1‑151 (MQ=255)
              aaaCAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAGAAATTTCTCGAGGCGGGGCCAGAAAAAAAGACAAGCAAattttttt                                                                                                                                                 >  1:438778/1‑151 (MQ=255)
              aaaCAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTTCAAAAAAAAAGACaatgccaatttttt                                                                                                                                                  >  1:1647370/1‑138 (MQ=255)
              aaaCAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTGCCCAAAAAAAGACAAGCACattttatt                                                                                                                                                 >  1:723279/1‑151 (MQ=255)
              aaaCAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGTCAAAAAAAGAGACAAGGCCactttatt                                                                                                                                                 >  1:1041411/1‑151 (MQ=255)
                 cAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTTCCGAAAAAAAGACCAGCACccttttttttt                                                                                                                                              >  1:723903/1‑150 (MQ=255)
                 cAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTTCAGAAAAAAAGACAAGCACaattttttttt                                                                                                                                              >  1:304699/1‑150 (MQ=255)
                 cAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTGCCGAAAAAAAGACAAGCACatttttttttt                                                                                                                                              >  1:1270143/1‑150 (MQ=255)
                 cAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCCGAAAAAAAGACAAGCACaattttttttt                                                                                                                                              >  2:835602/1‑150 (MQ=255)
                 cAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAACGACAAGGACatttttttttt                                                                                                                                              >  2:1700251/1‑150 (MQ=255)
                    tACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCt                                                                                                                                           <  1:1065716/151‑1 (MQ=255)
                        aCTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATc                                                                                                                                      <  1:661988/151‑1 (MQ=255)
                               cGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTa                                                                                                                            <  2:1086149/151‑1 (MQ=255)
                                 gTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTTCCGGAAAAAAGAAAAAGACAATTTATTTTTTCTCATCTGtttttta                                                                                                                          >  1:1047384/1‑148 (MQ=255)
                                 gTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCCGAAAAAAAGACATGCACATTTTTTTTTTCCTCCTTCGtttttaa                                                                                                                          >  1:382935/1‑148 (MQ=255)
                                 gTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAAAGAAAAGCAAATTTTTTTTTTCCTTATCTGTTTTAAg                                                                                                                          >  2:669166/1‑151 (MQ=255)
                                      aCCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAAAGGAAAGCACATTTTTTTTTTCCCCCTCtttttttaaaaggg                                                                                                                     >  2:1721729/1‑143 (MQ=255)
                                            gacagaTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGCCCGAAAAAAAGAAAAGGACATTTTTTTTTTCCTCATCtttttttaaaagggaaaaat                                                                                                               >  2:1371814/1‑137 (MQ=255)
                                              cagaTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCCGAAAAAAAGACAAGGACATTTTTTTTTTCCTCCTCTTTTTTTAAATACGAAACAAGa                                                                                                          >  2:614859/1‑151 (MQ=255)
                                              cagaTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGTCCGAAAAAAAGACATGCACATTTTATTTTTTCTCTTCTGTTTTTAGATTCGAAAAATGa                                                                                                          >  1:854863/1‑151 (MQ=255)
                                                gaTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCCGAAAAAAAAAAAAACACATTTTTTTTTTTCTCATCTGTTTTTAGAATCGAAAAAAGaaa                                                                                                        >  1:532742/1‑151 (MQ=255)
                                                gaTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAAAGACAATCAAAATTTATTTTTCCTCCTCTGTTTTTAAATggagaaaaataaa                                                                                                           >  2:1703947/1‑139 (MQ=255)
                                                gaTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGCCAGAAAAAAAGACAAACACATTTTTTTTTTTCCCCTCTTTTTTTAGATGCGgaaaaaaaaa                                                                                                          >  2:50733/1‑144 (MQ=255)
                                                 aTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCCGAAAAAACGAAAAGCACCTTTTTTTTTTCCCCCTCTTTTTTTAGATGCGgaaaaaaaaat                                                                                                         >  2:728087/1‑143 (MQ=255)
                                                         aTCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCCGAAAAAACGGCAAGCACATTTTTTTTTTCCTCATCTTTTTTTAAAAGCGGAAAAAGaaaattaaaggg                                                                                               >  2:116644/1‑142 (MQ=255)
                                                         aTCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGCCAGAAAAAACGACATGCACATTTTTTTTTTTCTCATCTTTTTTTAGATGAGGAAAATGAAATTCAAcagg                                                                                             >  1:1049002/1‑148 (MQ=255)
                                                              aaaaTGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGaa                                                                                       <  1:50716/150‑1 (MQ=255)
                                                                    gCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTTCCGAAAAAAAGCAAAGACCATTTTTTTTTTTCTCATCTGTTTTTAGATACGGAAACTGAAATTCAAACGGGGGaaaaaaaa                                                                                >  1:1408933/1‑151 (MQ=255)
                                                                     cTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAaaataaa                                                                               <  1:1157761/150‑1 (MQ=255)
                                                                       cAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTTCCGAAAAAACGACAAGCACCTTTTTTTTTTCCCCATCTTTTTTTAAATGCGGAAAAAGAAAATTAAAGGGGGAAAAAAAAAAgg                                                                            >  2:1387195/1‑151 (MQ=255)
                                                                         ggTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGTCCAAAAAAAAGACAAAGACAATTTTTTTTTTCTCCTCTGTTTTTAAATACGAAAAAAGAAATTTAACAGAGGGAAAAAAAAATggg                                                                           >  1:1313303/1‑151 (MQ=255)
                                                                         ggTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTTCCGAAAAAAAGAAAAGCACATTTTTTTTTTTCTCATCTGTTTTTATATGCGGAAAAAGAAAATTAAAGGAGGGAAAAAAAATtggg                                                                          >  1:452300/1‑150 (MQ=255)
                                                                         ggTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTTCAGAAAAAACGACATGCCAAATTTTTTTTTCCTCCTCTTTTTTTATAAAGGGAAAAAGAAAATTAAAGGAGGGAAAAAAAAAgggg                                                                          >  2:260239/1‑150 (MQ=255)
                                                                         ggTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTTCAGAAAAAAAGAAAAGAAAATTTTTTTTTTTCTTCTCTTTTTTTTAAAGCGAAAAAATAAAATAAAACGGGGGAAAAAAAAATggg                                                                           >  1:1188405/1‑151 (MQ=255)
                                                                         ggTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGTCAGAAAAAAAGACAATGACATTTTTTTTTTTCTTCTCTGGTTTTAAATGCGAAACAAGAAAATCAAAGGGGGGAAAATAAATgggg                                                                          >  1:82968/1‑150 (MQ=255)
                                                                         ggTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGCCCGAAAAAAAGACAAGCACATTTTTTTTTTCCTCCTCTGTTTTTAGAAGCGGAAAAAGAAATTTAACGGGGGGAAAAAAAATgggg                                                                          >  2:739501/1‑150 (MQ=255)
                                                                         ggTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGCCCAAAAAAACGACAAGCACAATTTTTTTTTTCTCCTCTTTTTTTAAAAGGGGAAAATAAAAATTAAAGGGGGGAAAAAAAATGGGa                                                                          >  2:852267/1‑151 (MQ=255)
                                                                          gTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATgg                                                                            <  2:1005749/148‑1 (MQ=255)
                                                                           tAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAAt                                                                        <  2:410896/151‑1 (MQ=255)
                                                                             gTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTTCAGAAAAAACGCAAACAACAATTTTTTTTTCCTCCTCTGGTTTTAGAAGGGGAAAAAGAAAAATAAAAGAGGAaaaaaaaaatggggaga                                                                      >  2:672416/1‑142 (MQ=255)
                                                                              tGGATGGTGTTATAACTTTGTTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATg                                                                       <  2:117370/150‑1 (MQ=255)
                                                                              tGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGa                                                                      <  1:1479813/150‑1 (MQ=255)
                                                                                gATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGAtt                                                                   <  2:1418877/150‑1 (MQ=255)
                                                                                    gtgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTTCCGAAAAAAAGAAAAAAACATTTTTTTTTTCCTCCTCTTTTTTTAAATGCGAAAAAATAAATTTAACGGGGGAAAAAAAAAAAGGGAAGATTTGCTa                                                              >  2:1277275/1‑151 (MQ=255)
                                                                                    gtgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTTCCCAAAAAAAAAAAAACACATTTTTTTTTTTCTCCTCTGTTTTTAAAAACGGAAAATGAAAATTTAACGGGGAAAAAAAAAAGGGGATGAtttggca                                                              >  1:760449/1‑146 (MQ=255)
                                                                                    gtgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTTCAGAAAAAACGAACAGGACATTTTTTTTTTCCTCCTTTTTTTTTAAAATGGAAAAAAAAAAATCAACGGAGGGAAAATAAAATGGGAAGGTTTggtt                                                               >  2:776705/1‑149 (MQ=255)
                                                                                    gtgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCCGAAAAAACGACAATTACATTTTATTTTTCCTCATCTGTTTTTAAATGCGCAAAATGAAAATTAAAGGAGGAAAAATAAATGGGAAAGAtttggta                                                              >  2:1529155/1‑146 (MQ=255)
                                                                                    gtgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCCGAAAAAAACACATTTACAATTTTTTTTTCCCCAACTGTTTTTAGATGGGAAAAAAAAAAATTAAACGCGGGAAAAAAAATGGGAATGAATGGCTa                                                              >  2:599954/1‑151 (MQ=255)
                                                                                    gtgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCCAAAAAAAAGACATGCACATTTTTTTTTTTCTCCTCTTTTTTTAAATGCGAAAAATGAAAATTAAAGGAGGGAAAAAAAATAGGAAATATTGGGTa                                                              >  1:1178027/1‑151 (MQ=255)
                                                                                    gtgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCt                                                               <  2:465404/150‑1 (MQ=255)
                                                                                    gtgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAACGAAAAGCACATTTTATTTTTCCTCATCTTTTTTTAAAAGCGAAAAAAAAAAATTAACGGGGGGAAAAAAAAATGGGATGATTTGCtt                                                              >  2:197227/1‑150 (MQ=255)
                                                                                    gtgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAAAGACAAGCACATTTTTTTTTTCCCCCTCTGTTTTTATAATCGGAAAAAGAAATTCAAAGGAGGAAAAAAAAAAGGGGAAGATTgggtt                                                              >  2:242336/1‑148 (MQ=255)
                                                                                    gtgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGTCAGAAAAAAAGAAATTCACAATTTTTTTTTCCCTCTTTGTTTTAAGAATCGAAAAATGAAAATTAAAGGGGGGAAAAAAAAATGGGatgaatgggtt                                                                >  1:1257792/1‑141 (MQ=255)
                                                                                    gtgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGTCAGAAAAAAAGAAAAGCAAATTTTATTTTTTCTCATCTGGTTTTAAAAGGGGAAAAATAAAATTAAAAGAGGAAAAATAAATGGGGATGATTggggt                                                              >  1:991024/1‑148 (MQ=255)
                                                                                    gtgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGCCCGAAAAAAAGACAAGGACATTTTATTTTTCCTCCTCTGTTTTTAGAAGCGGAAAATGAAAATCAAAGGAGGAAAAATAAAATGGGATGAtttggta                                                              >  1:53815/1‑146 (MQ=255)
                                                                                    gtgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGCCAGAAAAAACGACATGCCCATTTTTTTTTTCCCCATCTGTTTTTAGATGCGGAAAAAGAAAATTAAAGGGGGGAAAAAAAATGGGGATGAtttggta                                                              >  2:1024842/1‑146 (MQ=255)
                                                                                    gtgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGCCAGAAAAAACGACATGCACATTTTTTTTTTCCTCCTCTGTTTTTAGAAGCGGAACATGAAATTCAACGGGGGGAAAAAAAATGGGGATGATTGGCTa                                                              >  2:110580/1‑151 (MQ=255)
                                                                                    gtgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGCCAGAAAAAAAAACAAGGAAAATTTTTTTTTCCCCATCTTTTTTTAAAAGGGAAAAAAGAAAATTAAAGGAGGGAAAAAAAAAGGGGAAGAtttggtt                                                              >  2:1629784/1‑146 (MQ=255)
                                                                                     tgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTa                                                              <  2:1178425/150‑1 (MQ=255)
                                                                                      gtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTTCCGAAAAAAAGACAAACCAAATTTATTTTTTCTCCTCTGTTTTTAAATAAGAAACATGAAATTCAACCGAGGGAAAAAAAATTGTGATGATTGGGTAtt                                                            >  1:1182684/1‑151 (MQ=255)
                                                                                        tataACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTAtttt                                                          <  2:625458/151‑1 (MQ=255)
                                                                                               ttGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGTCCGAAAAAAAAAAAAGCAAATTTTTTTTTCCCTCCTCCGTTTTTATATTCGGAAAATAAAAATTAAACGGGGGAAAAAAAAATGGGATGATTTGCTAATTTTCACaaa                                                   >  2:789351/1‑151 (MQ=255)
                                                                                                 gTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGCCAGAAAAAAGGACATGCACATTTTTTTTTTCCTCATCTGTTTTTAAAAGGGGAAAAAAAAAATTAAAGGAGGGAAAATAAATTGGGATGATTGGGttttttttcaaaaat                                                 >  2:1688894/1‑142 (MQ=255)
                                                                                                 gTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGCCCCGAAAAAAAACAAAAAACAATTTATTTTTCCCCCTCTCTTTTTAGAAGAGAAAAAAAAAAATTAAAGGGGGAAAAAAAAATTGTGAAGATTGGGTATTTTTTAGaaaaa                                                 >  1:841900/1‑149 (MQ=255)
                                                                                                     ataCAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCCAAAAAAAAGACAAGCAAAATTTATTTTTTCTCATCTGTTTTTAGATGCGAAACATGAAAATTAACGGAGGGAAAATAAATGGGAATGATTGGGTATTTTTCAGaaaattaa                                              >  1:554149/1‑146 (MQ=255)
                                                                                                     ataCAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATTATTGGCTATTTTGCAGAAATTGAc                                              <  1:612228/151‑1 (MQ=255)
                                                                                                       acaacaGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTc                                            <  1:545213/151‑1 (MQ=255)
                                                                                                        caacaGTAAATAATAAAAATTTCTCGAGGCGGGTCCCGAAAAAACGACATGCCCCTTTTTTTTTTCCCCCTCCTTTTTTAAATGCGAAAAATGAAATTCAACGGGGGAAAAATAAAATGGGATGGTTGGGTATTTTTGAGaaaattaatca                                           >  2:45600/1‑143 (MQ=255)
                                                                                                        caacaGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTTCCTCCTCTGTTTTAAGATGCGAAACAAGAAATTCAAAGGAGGAAAAATAAATGGGAATGTTTTGCTATTTTTTAGAAATTAAccta                                           >  2:414174/1‑148 (MQ=255)
                                                                                                        caacaGTAAATAATAAAAATTTCTCGAGGCGGGGCCAGAAAAAAAGACAAACACATTTTATTTTTTCCCTTCTTGTTTTAAAAGCGGAAAAAGAAAATCTAAGGAGGGAAAAAAAAAAGGGAAGAATTGGTAttttttcgaaaatgaacta                                           >  1:1166955/1‑136 (MQ=255)
                                                                                                         aacaGTAAATAATAAAAATTTCTCGAGGCGGGGGCAAAAAAAAGGAAAAGCACATTTTATTTTTCCTCCTCTGTTTTTAGATGCGGAACAAGAAAATTAAACGAGGGGAAAAAAATAGGGATGATTTGGTATTTTTTAGAAAATTACTCAg                                          >  1:1613238/1‑151 (MQ=255)
                                                                                                          acaGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAACGACACGCACATTTTTTTTTTCCCCCCCTTTTTTTAGATGGGAAAAAAAAAAATTAAAGGAGGAAAAAAAAAATGGAAAGATTTGGTTTTTTTCAGAAAATTACTCaaa                                         >  2:1535162/1‑149 (MQ=255)
                                                                                                          acaGTAAATAATAAAAATTTCTCGAGGCGGGGTCAGAAAAAAAGAAAAGAACAATTTATTTTTCCCCATCTGTTTTTAGAAGCGAAAAATGAAAATTAACGGAGGAAAAAAAAATTGGTATGATTTGGTAATTTTGTAGAAAtgacatcaa                                          >  1:129857/1‑143 (MQ=255)
                                                                                                          acaGTAAATAATAAAAATTTCTCGAGGCGGGGCCAGAAAAAAAGACAAGCACATTTTTTTTTTTCCCATCTGTTTTTAAAAGGGAAAAATGAAAATTAAAGGAGGAAAAAAAAAAGGGGATAATTGGGTATTTTGTAGaaaattagttcga                                         >  1:1519712/1‑141 (MQ=255)
                                                                                                          acaGTAAATAATAAAAATTTCTCGAGGCGGGCTCCGAAAAAAAGACAAGCAAATTTTTTTTTTTCCCTTCTTTTTTTATATGGGAAACCAGCAAATCAACGGGGGGAAAATTAATGGGAATGATTGGGTTTTTTTTAGAAACTGAccccga                                         >  1:240055/1‑146 (MQ=255)
                                                                                                           caGTAAATAATAAAAATTTCTCGAGGCGGGCACAGAAAAAAACAAAAGATCATTTTTTTTTTTCTTTACTGGTTTTAGAAGAGGAACAATAAAATCACAAGGGGGAAAAAAAAAGGGGATGATTGGGTATTTTGCATAAAATGACATAGaa                                        >  1:589434/1‑151 (MQ=255)
                                                                                                               aaaTAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGa                                    <  2:1550047/151‑1 (MQ=255)
                                                                                                                aataatAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGAt                                   <  2:903161/151‑1 (MQ=255)
                                                                                                                     taaAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAAcc                              <  2:259341/151‑1 (MQ=255)
                                                                                                                     taaAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAAcc                              <  2:1230660/151‑1 (MQ=255)
                                                                                                                      aaaaaTTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCa                             <  2:275522/151‑1 (MQ=255)
                                                                                                                           tttCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGc                        <  1:1024795/151‑1 (MQ=255)
                                                                                                                                cGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAg                   <  2:926201/151‑1 (MQ=255)
                                                                                                                                    gCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCt                <  1:534836/150‑1 (MQ=255)
                                                                                                                                        ggTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTa               >  2:748310/1‑148 (MQ=255)
                                                                                                                                            ccAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGaaa         <  2:1500924/151‑1 (MQ=255)
                                                                                                                                            ccAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGaaa         <  1:739145/151‑1 (MQ=255)
                                                                                                                                            ccAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGaaa         <  1:1243150/151‑1 (MQ=255)
                                                                                                                                               gAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGaaaaa       >  1:812550/1‑150 (MQ=255)
                                                                                                                                                aaaaaGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAAcc     <  2:456592/151‑1 (MQ=255)
                                                                                                                                                aaaaaGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAAcc     <  1:827227/151‑1 (MQ=255)
                                                                                                                                                   aaGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCttt  >  1:190467/1‑151 (MQ=255)
                                                                                                                                                     |                                                                                                                                                                  
CTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTT  >  NC_000913/2386716‑2387010

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: