Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,386,862 | 0 | G | A | 66.1% | 92.2 / 112.4 | 121 | intergenic (+31/‑72) | yfbL/yfbM | putative M28A family peptidase/DUF1877 family protein |
Reads supporting (aligned to +/- strand): ref base G (7/34); new base A (80/0); total (87/34) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.73e-23 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.64e-13 |
Only 100 of 121 total aligned reads displayed.
CTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTT > NC_000913/2386716‑2387010 | cTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGAc < 1:615411/151‑1 (MQ=255) ttttATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TTCCGAAAAAAAGACaa > 1:625204/1‑150 (MQ=255) tttATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATg < 2:1143185/151‑1 (MQ=255) gTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTTCCAAAAAAAG‑GACATTAAC‑att > 2:484774/1‑151 (MQ=255) gTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TTCAGAAAAAAAGACAAGgac‑aat > 2:1721003/1‑149 (MQ=255) gTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCCGAAAAAACGACATAcaacat > 1:1733441/1‑147 (MQ=255) gTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCCGAAAAAAAGAAAAGCAC‑att > 2:333447/1‑151 (MQ=255) gTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑GTCCGAAAAAAAGACAAACAC‑att > 1:515186/1‑151 (MQ=255) gTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑GCCCGAAAAAAAGACATGCAC‑att > 2:347581/1‑151 (MQ=255) aaaCAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAGAAATTTCTCGAGGC‑GGG‑GCCAGAAAAAAAGACAAGCAA‑attttttt > 1:438778/1‑151 (MQ=255) aaaCAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TTCAAAAAAAAAGACaatgccaatttttt > 1:1647370/1‑138 (MQ=255) aaaCAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TGCCCAAAAAAAGACAAGCAC‑attttatt > 1:723279/1‑151 (MQ=255) aaaCAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑GTCAAAAAAAGAGACAAGGCC‑actttatt > 1:1041411/1‑151 (MQ=255) cAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TTCCGAAAAAAAGACCAGCAC‑ccttttttttt > 1:723903/1‑150 (MQ=255) cAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TTCAGAAAAAAAGACAAGCAC‑aattttttttt > 1:304699/1‑150 (MQ=255) cAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TGCCGAAAAAAAGACAAGCAC‑atttttttttt > 1:1270143/1‑150 (MQ=255) cAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCCGAAAAAAAGACAAGCAC‑aattttttttt > 2:835602/1‑150 (MQ=255) cAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAACGACAAGGAC‑atttttttttt > 2:1700251/1‑150 (MQ=255) tACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCt < 1:1065716/151‑1 (MQ=255) aCTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATc < 1:661988/151‑1 (MQ=255) cGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTa < 2:1086149/151‑1 (MQ=255) gTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TTCCGGAAAAAAGAAAAAGAC‑AATTTATTTTTTCT‑CATC‑T‑G‑tttttta > 1:1047384/1‑148 (MQ=255) gTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCCGAAAAAAAGACATGCAC‑ATTTTTTTTTTCCT‑CCTT‑C‑G‑tttttaa > 1:382935/1‑148 (MQ=255) gTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAAAGAAAAGCAA‑ATTTTTTTTTTCCT‑TATC‑T‑G‑TTTTAAg > 2:669166/1‑151 (MQ=255) aCCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAAAGGAAAGCAC‑ATTTTTTTTTTCCC‑CCTC‑t‑t‑tttttaaaaggg > 2:1721729/1‑143 (MQ=255) gacagaTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑GCCCGAAAAAAAGAAAAGGAC‑ATTTTTTTTTTCCT‑CATC‑t‑t‑tttttaaaagggaaaaat > 2:1371814/1‑137 (MQ=255) cagaTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCCGAAAAAAAGACAAGGAC‑ATTTTTTTTTTCCT‑CCTC‑T‑T‑TTTTTAAATACG‑AAACAA‑G‑a > 2:614859/1‑151 (MQ=255) cagaTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑GTCCGAAAAAAAGACATGCAC‑ATTTTATTTTTTCT‑CTTC‑T‑G‑TTTTTAGATTCG‑AAAAAT‑G‑a > 1:854863/1‑151 (MQ=255) gaTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCCGAAAAAAAAAAAAACAC‑ATTTTTTTTTTTCT‑CATC‑T‑G‑TTTTTAGAATCG‑AAAAAA‑G‑aaa > 1:532742/1‑151 (MQ=255) gaTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAAAGACAATCAA‑AATTTATTTTTCCT‑CCTC‑T‑G‑TTTTTAAATggagaaaaataaa > 2:1703947/1‑139 (MQ=255) gaTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑GCCAGAAAAAAAGACAAACAC‑ATTTTTTTTTTTCC‑CCTC‑T‑T‑TTTTTAGATGCG‑gaaaaaaaaa > 2:50733/1‑144 (MQ=255) aTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCCGAAAAAACGAAAAGCAC‑CTTTTTTTTTTCCC‑CCTC‑T‑T‑TTTTTAGATGCG‑gaaaaaaaaat > 2:728087/1‑143 (MQ=255) aTCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCCGAAAAAACGGCAAGCAC‑ATTTTTTTTTTCCT‑CATC‑T‑T‑TTTTTAAAAGCG‑GAAAAA‑G‑aaaattaaaggg > 2:116644/1‑142 (MQ=255) aTCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑GCCAGAAAAAACGACATGCAC‑ATTTTTTTTTTTCT‑CATC‑T‑T‑TTTTTAGATGAG‑GAAAAT‑G‑AAATTC‑A‑Acagg > 1:1049002/1‑148 (MQ=255) aaaaTGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGaa < 1:50716/150‑1 (MQ=255) gCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TTCCGAAAAAAAGCAAAGACC‑ATTTTTTTTTTTCT‑CATC‑T‑G‑TTTTTAGATACG‑GAAACT‑G‑AAATTCAA‑AC‑GGG‑GGaaaaaa‑aa > 1:1408933/1‑151 (MQ=255) cTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAaaat‑aaa < 1:1157761/150‑1 (MQ=255) cAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TTCCGAAAAAACGACAAGCAC‑CTTTTTTTTTTCCC‑CATC‑T‑T‑TTTTTAAATGCG‑GAAAAA‑G‑AAAATT‑A‑AA‑GGG‑GGAAAAAA‑AAAAgg > 2:1387195/1‑151 (MQ=255) ggTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGG‑TCCA‑AAAAAAAGACAAAGAC‑AATTTTTTTTTTCT‑CCTC‑T‑G‑TTTTTAAATACG‑AAAAAA‑G‑AAATTT‑A‑AC‑AGAGGGAAAAAA‑AAATggg > 1:1313303/1‑151 (MQ=255) ggTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TTCCGAAAAAAAGAAAAGCAC‑ATTTTTTTTTTTCT‑CATC‑T‑G‑TTTTTATATGCG‑GAAAAA‑G‑AAAATT‑A‑AA‑GGA‑GGGAAAAA‑AAATtggg > 1:452300/1‑150 (MQ=255) ggTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TTCAGAAAAAACGACATGCCA‑AATTTTTTTTTCCT‑CCTC‑T‑T‑TTTTTATAAAGG‑GAAAAA‑G‑AAAATT‑A‑AA‑GGA‑GGGAAAAA‑AAAAgggg > 2:260239/1‑150 (MQ=255) ggTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TTCAGAAAAAAAGAAAAGAAA‑ATTTTTTTTTTTCT‑TCTC‑T‑T‑TTTTTTAAAGCGAAAAAAT‑A‑AAATAA‑A‑AC‑GGG‑GGAAAAAA‑AAATggg > 1:1188405/1‑151 (MQ=255) ggTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑GTCAGAAAAAAAGACAATGAC‑ATTTTTTTTTTTCT‑TCTC‑T‑G‑GTTTTAAATGCG‑AAACAA‑G‑AAAATC‑A‑AA‑GGG‑GGGAAAAT‑AAATgggg > 1:82968/1‑150 (MQ=255) ggTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑GCCCGAAAAAAAGACAAGCAC‑ATTTTTTTTTTCCT‑CCTC‑T‑G‑TTTTTAGAAGCG‑GAAAAA‑G‑AAATTT‑A‑AC‑GGG‑GGGAAAAA‑AAATgggg > 2:739501/1‑150 (MQ=255) ggTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑GCCCAAAAAAACGACAAGCAC‑AATTTTTTTTTTCT‑CCTC‑T‑T‑TTTTTAAAAGGG‑GAAAAT‑A‑AAAATT‑A‑AA‑GGG‑GGGAAAAA‑AAATGGGa > 2:852267/1‑151 (MQ=255) gTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATgg < 2:1005749/148‑1 (MQ=255) tAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAAt < 2:410896/151‑1 (MQ=255) gTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TTCAGAAAAAACGCAAACAAC‑AATTTTTTTTTCCT‑CCTC‑T‑G‑GTTTTAGAAGGG‑GAAAAA‑G‑AAAAAT‑A‑AA‑AGA‑GGAaaaaa‑aaaatggggaga > 2:672416/1‑142 (MQ=255) tGGATGGTGTTATAACTTTGTTTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATg < 2:117370/150‑1 (MQ=255) tGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGa < 1:1479813/150‑1 (MQ=255) gATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑tt < 2:1418877/150‑1 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TTCCGAAAAAAAGAAAAAAAC‑ATTTTTTTTTTCCT‑CCTC‑T‑T‑TTTTTAAATGCG‑AAAAAA‑T‑AAATTT‑A‑AC‑GGG‑GGAAAAAA‑AAAAAGGGAAGA‑TTTGCTa > 2:1277275/1‑151 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TTCCCAAAAAAAAAAAAACAC‑ATTTTTTTTTTTCT‑CCTC‑T‑G‑TTTTTAAAAACG‑GAAAAT‑GAAAATTT‑A‑AC‑GG‑‑GGAAAAAA‑AAAAGGGGATGA‑tttggca > 1:760449/1‑146 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TTCAGAAAAAACGAACAGGAC‑ATTTTTTTTTTCCTCCTTT‑T‑T‑TTTTAAAATG‑G‑AAAAAA‑A‑AAAATC‑A‑AC‑GGA‑GGGAAAATAAAATGGGAAGGT‑TTggtt > 2:776705/1‑149 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCCGAAAAAACGACAATTAC‑ATTTTATTTTTCCT‑CATC‑T‑G‑TTTTTAAATGCG‑CAAAAT‑G‑AAAATT‑A‑AA‑GGA‑GGAAAAAT‑AAATGGGAAAGA‑tttggta > 2:1529155/1‑146 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCCGAAAAAAACACATTTAC‑AATTTTTTTTTCCC‑CAAC‑T‑G‑TTTTTAGATGGGAAAAAAA‑A‑AAATTA‑A‑AC‑GCG‑GGAAAAA‑‑AAATGGGAATGA‑ATGGCTa > 2:599954/1‑151 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCCAAAAAAAAGACATGCAC‑ATTTTTTTTTTTCT‑CCTC‑T‑T‑TTTTTAAATGCG‑AAAAAT‑G‑AAAATT‑A‑AA‑GGA‑GGGAAAAA‑AAATAGGAAATA‑TTGGGTa > 1:1178027/1‑151 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCt < 2:465404/150‑1 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAACGAAAAGCAC‑ATTTTATTTTTCCT‑CATC‑T‑T‑TTTTTAAAAGCG‑AAAAAA‑A‑AAAATT‑A‑ACGGGG‑GGAAAAAA‑AAATGGG‑ATGA‑TTTGCtt > 2:197227/1‑150 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAAAGACAAGCAC‑ATTTTTTTTTTCCC‑CCTC‑T‑G‑TTTTTATAATCG‑GAAAAA‑G‑AAATTC‑A‑AA‑GGA‑GGAAAAAA‑AAAAGGGGAAGA‑TTgggtt > 2:242336/1‑148 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑GTCAGAAAAAAAGAAATTCACAATTTTTTTTTCCCT‑C‑TT‑T‑G‑TTTTAAGAATCG‑AAAAAT‑GAAAATTA‑A‑AG‑GGG‑GGAAAAAA‑AAATGGGatgaatgggtt > 1:1257792/1‑141 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑GTCAGAAAAAAAGAAAAGCAA‑ATTTTATTTTTTCT‑CATC‑TGG‑TTTTAAAAGGGG‑AAAAAT‑A‑AAATT‑‑A‑AA‑AGA‑GGAAAAAT‑AAATGGGGATGA‑TTggggt > 1:991024/1‑148 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑GCCCGAAAAAAAGACAAGGAC‑ATTTTATTTTTCCT‑CCTC‑T‑G‑TTTTTAGAAGCG‑GAAAAT‑G‑AAAATC‑A‑AA‑GGA‑GGAAAAAT‑AAAATGGGATGA‑tttggta > 1:53815/1‑146 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑GCCAGAAAAAACGACATGCCC‑ATTTTTTTTTTCCC‑CATC‑T‑G‑TTTTTAGATGCG‑GAAAAA‑G‑AAAATT‑A‑AA‑GGG‑GGGAAAAA‑AAATGGGGATGA‑tttggta > 2:1024842/1‑146 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑GCCAGAAAAAACGACATGCAC‑ATTTTTTTTTTCCT‑CCTC‑T‑G‑TTTTTAGAAGCG‑GAACAT‑G‑AAATTC‑A‑AC‑GGG‑GGGAAAAA‑AAATGGGGATGA‑TTGGCTa > 2:110580/1‑151 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑GCCAGAAAAAAAAACAAGGAA‑AATTTTTTTTTCCC‑CATC‑T‑T‑TTTTTAAAAGGG‑AAAAAA‑G‑AAAATT‑A‑AA‑GGA‑GGGAAAAA‑AAAAGGGGAAGA‑tttggtt > 2:1629784/1‑146 (MQ=255) tgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTa < 2:1178425/150‑1 (MQ=255) gtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TTCCGAAAAAAAGACAAACCA‑AATTTATTTTTTCT‑CCTC‑T‑G‑TTTTTAAATAAG‑AAACAT‑G‑AAATTC‑A‑AC‑CGA‑GGGAAAAA‑AAATTGTGATGA‑TTGGGTAtt > 1:1182684/1‑151 (MQ=255) tataACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTAtttt < 2:625458/151‑1 (MQ=255) ttG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑GTCCGAAAAAAAAAAAAGCAA‑ATTTTTTTTTCCCT‑CCTC‑C‑G‑TTTTTATATTCG‑GAAAATAA‑AAATTA‑A‑AC‑GGG‑GGAAAAAA‑AAATGGG‑ATGA‑TTTGCTAATTTTCACaaa > 2:789351/1‑151 (MQ=255) g‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑GCCAGAAAAAAGGACATGCAC‑ATTTTTTTTTTCCT‑CATC‑T‑GTTTTTAAAAGGGG‑AAAAAA‑A‑AAATT‑‑A‑AA‑GGA‑GGGAAAAT‑AAATTGGGATGA‑TTGGGttttttttcaaaaat > 2:1688894/1‑142 (MQ=255) g‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑CCCCGAAAAAAAACAAAAAAC‑AATTTATTTTTCCC‑CCTC‑T‑C‑TTTTTAGAAGAG‑AAAAAA‑A‑AAAATT‑A‑AA‑GGG‑GGAAAAAA‑AAATTGTGAAGA‑TTGGGTATTTTTTAGaaaaa > 1:841900/1‑149 (MQ=255) ataCAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCCAAAAAAAAGACAAGCAA‑AATTTATTTTTTCT‑CATC‑T‑G‑TTTTTAGATGCG‑AAACAT‑G‑AAAATT‑A‑AC‑GGA‑GGGAAAAT‑AAATGGGAATGA‑TTGGGTATTTTTCAGaaaattaa > 1:554149/1‑146 (MQ=255) ataCAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATTA‑TTGGCTATTTTGCAGAAATTGAc < 1:612228/151‑1 (MQ=255) acaacaGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTc < 1:545213/151‑1 (MQ=255) caacaGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCCGAAAAAACGACATGCCC‑CTTTTTTTTTTCCC‑CCTC‑C‑T‑TTTTTAAATGCG‑AAAAAT‑G‑AAATTC‑A‑AC‑GGG‑GGAAAAAT‑AAAATGGGATGG‑TTGGGTATTTTTGAGaaaattaatca > 2:45600/1‑143 (MQ=255) caacaGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTTCCT‑CCTC‑T‑G‑TTTTAAGATGCG‑AAACAA‑G‑AAATTC‑A‑AA‑GGA‑GGAAAAAT‑AAATGGGAATGT‑TTTGCTATTTTTTAGAAATTAAccta > 2:414174/1‑148 (MQ=255) caacaGTAAATAATAAAAATTTCTCGAGGC‑GGG‑GCCAGAAAAAAAGACAAACAC‑ATTTTATTTTTTCC‑CTTCTT‑G‑TTTTAA‑AAGCG‑GAAAAA‑G‑AAAATC‑T‑AA‑GGAGGGAAAAAA‑AAAAGGGAAGAA‑TTGG‑TAttttttcgaaaatgaacta > 1:1166955/1‑136 (MQ=255) aacaGTAAATAATAAAAATTTCTCGAGGC‑GGG‑GGCAAAAAAAAGGAAAAGCAC‑ATTTTATTTTTCCT‑CCTC‑T‑G‑TTTTTAGATGCG‑GAACAA‑G‑AAAATT‑A‑AA‑CGA‑GGGGAAAA‑AAATAGGGATGA‑TTTGGTATTTTTTAGAAAATTACTCAg > 1:1613238/1‑151 (MQ=255) acaGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAACGACACGCAC‑ATTTTTTTTTTCCC‑CCCC‑T‑T‑TTTTTAGATGGG‑AAAAAA‑A‑AAAATT‑A‑AA‑GGA‑GGAAAAAA‑AAAATGGAAAGA‑TTTGGTTTTTTTCAGAAAATTACTCaaa > 2:1535162/1‑149 (MQ=255) acaGTAAATAATAAAAATTTCTCGAGGC‑GGG‑GTCAGAAAAAAAGAAAAGAAC‑AATTTATTTTTCCC‑CATC‑T‑G‑TTTTTAGAAGCG‑AAAAAT‑G‑AAAATT‑A‑AC‑GGA‑GGAAAAAA‑AAATTGGTATGATTTGGTAATTTTGTAGAAAtgacatcaa > 1:129857/1‑143 (MQ=255) acaGTAAATAATAAAAATTTCTCGAGGC‑GGG‑GCCAGAAAAAAAGACAAGCAC‑ATTTTTTTTTTTCC‑CATC‑T‑G‑TTTTTAAAAGGG‑AAAAAT‑G‑AAAATT‑A‑AA‑GGA‑GGAAAAAA‑AAAAGGGGATAA‑TTGGGTATTTTGTAGaaaattagttcga > 1:1519712/1‑141 (MQ=255) acaGTAAATAATAAAAATTTCTCGAGGC‑GGG‑CTCCGAAAAAAAGACAAGCAA‑ATTTTTTTTTTTCC‑CTTC‑T‑T‑TTTTTATATGGG‑AAACCA‑G‑CAAATC‑A‑AC‑GGG‑GGGAAAAT‑TAATGGGAATGA‑TTGGGTTTTTTTTAGAAACTGAccccga > 1:240055/1‑146 (MQ=255) caGTAAATAATAAAAATTTCTCGAGGC‑GGG‑CACAGAAAAAAACAAAAGATC‑ATTTTTTTTTTTCT‑TTAC‑T‑G‑GTTTTAGAAGAG‑GAACAA‑T‑AAAATC‑ACAA‑GGG‑GGAAAAA‑‑AAAAGGGGATGA‑TTGGGTATTTTGCATAAAATGACATAGaa > 1:589434/1‑151 (MQ=255) aaaTAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGa < 2:1550047/151‑1 (MQ=255) aataatAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGAt < 2:903161/151‑1 (MQ=255) taaAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAAcc < 2:259341/151‑1 (MQ=255) taaAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAAcc < 2:1230660/151‑1 (MQ=255) aaaaaTTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCa < 2:275522/151‑1 (MQ=255) tttCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGc < 1:1024795/151‑1 (MQ=255) cGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAg < 2:926201/151‑1 (MQ=255) gC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCt < 1:534836/150‑1 (MQ=255) gg‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTa > 2:748310/1‑148 (MQ=255) ccAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGaaa < 2:1500924/151‑1 (MQ=255) ccAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGaaa < 1:739145/151‑1 (MQ=255) ccAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGaaa < 1:1243150/151‑1 (MQ=255) gAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGaaaaa > 1:812550/1‑150 (MQ=255) aaaaaGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAAcc < 2:456592/151‑1 (MQ=255) aaaaaGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAAcc < 1:827227/151‑1 (MQ=255) aaGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCttt > 1:190467/1‑151 (MQ=255) | CTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGG‑TCCAGAAAAAGCGACATGCAC‑ATTTTATTTTCCCT‑CATC‑T‑G‑TTTTAAGATGCG‑AAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTT > NC_000913/2386716‑2387010 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |