Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,386,883 | 0 | C | T | 48.9% | 74.5 / 120.0 | 131 | intergenic (+52/‑51) | yfbL/yfbM | putative M28A family peptidase/DUF1877 family protein |
Reads supporting (aligned to +/- strand): ref base C (16/51); new base T (64/0); total (80/51) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.49e-22 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 133 total aligned reads displayed.
TACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACG > NC_000913/2386736‑2387032 | tACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCt < 1:1065716/151‑1 (MQ=255) aCTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATc < 1:661988/151‑1 (MQ=255) cccGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑ttt < 1:1696234/151‑1 (MQ=255) cGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAAAGACAAGCAA‑A‑TTTTTTTTTTCCC‑CCTC‑t‑t‑ttttt > 2:1480494/1‑150 (MQ=255) gTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTTCCGGAAAAAAGAAAAAGAC‑A‑ATTTATTTTTTCT‑CATC‑T‑G‑tttttta > 1:1047384/1‑148 (MQ=255) gTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTGCCGAAAAAAAGAAAAGCCA‑A‑ATTTTTTTTTTCT‑CCTC‑T‑G‑TTTTT‑Ag > 1:522680/1‑151 (MQ=255) gTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCCGAAAAAAAGACATGCAC‑A‑TTTTTTTTTTCCT‑CCTT‑C‑G‑tttttaa > 1:382935/1‑148 (MQ=255) gacagaTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGGCCCGAAAAAAAGAAAAGGAC‑A‑TTTTTTTTTTCCT‑CATC‑t‑t‑tttttaaaagggaaaaat > 2:1371814/1‑137 (MQ=255) cagaTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCCGAAAAAAAGACAAGGAC‑A‑TTTTTTTTTTCCT‑CCTC‑T‑T‑TTTTT‑AA‑ATACGAAACAA‑G‑a > 2:614859/1‑151 (MQ=255) cagaTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGGTCCGAAAAAAAGACATGCAC‑A‑TTTTATTTTTTCT‑CTTC‑T‑G‑TTTTT‑AG‑ATTCGAAAAAT‑G‑a > 1:854863/1‑151 (MQ=255) gaTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCCGAAAAAAAAAAAAACAC‑A‑TTTTTTTTTTTCT‑CATC‑T‑G‑TTTTT‑AG‑AATCGAAAAAA‑G‑aaa > 1:532742/1‑151 (MQ=255) gaTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAAAGACAATCAA‑A‑ATTTATTTTTCCT‑CCTC‑T‑G‑TTTTT‑AA‑ATggagaaaaataaa > 2:1703947/1‑139 (MQ=255) gaTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGGCCAGAAAAAAAGACAAACAC‑A‑TTTTTTTTTTTCC‑CCTC‑T‑T‑TTTTT‑AG‑ATGCGgaaaaaaaaa > 2:50733/1‑144 (MQ=255) aTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCCGAAAAAACGAAAAGCAC‑C‑TTTTTTTTTTCCC‑CCTC‑T‑T‑TTTTT‑AG‑ATGCGgaaaaaaaaat > 2:728087/1‑143 (MQ=255) aaaaTGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGaa < 1:50716/150‑1 (MQ=255) gCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTTCCGAAAAAAAGCAAAGACC‑A‑TTTTTTTTTTTCT‑CATC‑T‑G‑TTTTT‑AG‑ATACGGAAACT‑G‑AAATTCAA‑AC‑GGG‑GGaaaaaa‑aa > 1:1408933/1‑151 (MQ=255) ggTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGTCCA‑AAAAAAAGACAAAGAC‑A‑ATTTTTTTTTTCT‑CCTC‑T‑G‑TTTTT‑AA‑ATACGAAAAAA‑G‑AAATTT‑A‑AC‑AGAGGGAAAAAA‑AAATggg > 1:1313303/1‑151 (MQ=255) ggTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTTCCGAAAAAAAGAAAAGCAC‑A‑TTTTTTTTTTTCT‑CATC‑T‑G‑TTTTT‑AT‑ATGCGGAAAAA‑G‑AAAATT‑A‑AA‑GGA‑GGGAAAAA‑AAATtggg > 1:452300/1‑150 (MQ=255) ggTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTTCAGAAAAAACGACATGCCA‑A‑ATTTTTTTTTCCT‑CCTC‑T‑T‑TTTTT‑AT‑AAAGGGAAAAA‑G‑AAAATT‑A‑AA‑GGA‑GGGAAAAA‑AAAAgggg > 2:260239/1‑150 (MQ=255) ggTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAACGAAATGCCC‑A‑TTTTTTTTTTCCC‑CCTC‑T‑T‑TTTTT‑AA‑AAGCGAAAAAT‑G‑AAAATC‑A‑AC‑GGA‑GGGAAAAA‑AAATGGGa > 2:683118/1‑151 (MQ=255) ggTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGGTCAGAAAAAAAGACAATGAC‑A‑TTTTTTTTTTTCT‑TCTC‑T‑G‑GTTTT‑AA‑ATGCGAAACAA‑G‑AAAATC‑A‑AA‑GGG‑GGGAAAAT‑AAATgggg > 1:82968/1‑150 (MQ=255) gTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGGCCAAAAAAAAAGACAAATCC‑C‑TCTTTTTTTTCCT‑CCTT‑C‑G‑TTTTA‑AC‑AAGCGGAAAAA‑A‑GAATTC‑C‑AA‑GGA‑GGAAAAAT‑CAATtggga > 2:929615/1‑149 (MQ=255) gTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTTCAGAAAAAACGCAAACAAC‑A‑ATTTTTTTTTCCT‑CCTC‑T‑G‑GTTTT‑AG‑AAGGGGAAAAA‑G‑AAAAAT‑A‑AA‑AGA‑GGAaaaaa‑aaaatggggaga > 2:672416/1‑142 (MQ=255) tGGATGGTGTTATAACTTTGTTTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATg < 2:117370/150‑1 (MQ=255) tGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGa < 1:1479813/150‑1 (MQ=255) tGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑t < 2:279775/151‑1 (MQ=255) gATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑tt < 2:1418877/150‑1 (MQ=255) aTGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTg < 2:437391/150‑1 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTTCCGAAAAAAAGAAAAAAAC‑A‑TTTTTTTTTTCCT‑CCTC‑T‑T‑TTTTT‑AA‑ATGCGAAAAAA‑T‑AAATTT‑A‑AC‑GGG‑GGAAAAAA‑AAAAAGGGAAGA‑TTTGCTa > 2:1277275/1‑151 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTTCCCAAAAAAAAAAAAACAC‑A‑TTTTTTTTTTTCT‑CCTC‑T‑G‑TTTTT‑AA‑AAACGGAAAAT‑GAAAATTT‑A‑AC‑GG‑‑GGAAAAAA‑AAAAGGGGATGA‑tttggca > 1:760449/1‑146 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTTCAGAAAAAACGAACAGGAC‑A‑TTTTTTTTTTCCTCCTTT‑T‑T‑TTTTA‑AA‑ATG‑GAAAAAA‑A‑AAAATC‑A‑AC‑GGA‑GGGAAAATAAAATGGGAAGGT‑TTggtt > 2:776705/1‑149 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCCGAAAAAACGACAATTAC‑A‑TTTTATTTTTCCT‑CATC‑T‑G‑TTTTT‑AA‑ATGCGCAAAAT‑G‑AAAATT‑A‑AA‑GGA‑GGAAAAAT‑AAATGGGAAAGA‑tttggta > 2:1529155/1‑146 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCCAAAAAAAAGACATGCAC‑A‑TTTTTTTTTTTCT‑CCTC‑T‑T‑TTTTT‑AA‑ATGCGAAAAAT‑G‑AAAATT‑A‑AA‑GGA‑GGGAAAAA‑AAATAGGAAATA‑TTGGGTa > 1:1178027/1‑151 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCt < 2:465404/150‑1 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAACGACATGCAC‑A‑ATTTATTTTTCCT‑CCTT‑T‑G‑TTTTT‑AG‑ATGCGAAAAAA‑G‑AAAATT‑C‑AC‑GGG‑GGGAAAAA‑AAATTGGGATGA‑tttggta > 1:370815/1‑146 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAACGAAAAGCAC‑A‑TTTTATTTTTCCT‑CATC‑T‑T‑TTTTT‑AA‑AAGCGAAAAAA‑A‑AAAATT‑A‑ACGGGG‑GGAAAAAA‑AAATGGG‑ATGA‑TTTGCtt > 2:197227/1‑150 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAAAGACAAGCAC‑A‑TTTTTTTTTTCCC‑CCTC‑T‑G‑TTTTT‑AT‑AATCGGAAAAA‑G‑AAATTC‑A‑AA‑GGA‑GGAAAAAA‑AAAAGGGGAAGA‑TTgggtt > 2:242336/1‑148 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAAAGACAAGCAC‑A‑ATTTTTTTTTCCT‑CCTC‑T‑G‑TTTTT‑AA‑AAGCGAAAAAA‑G‑AAAATT‑A‑AA‑GGA‑GGGAAAAA‑AAAAGGGGAAGA‑TTTGCTa > 2:536547/1‑151 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAAAAAAAAACAA‑A‑TTTTTTTTTTCCC‑CCTC‑T‑G‑TTTTT‑AA‑ATGGGAAAAATAA‑AAATTA‑A‑AG‑GGG‑GAAAAAAA‑AAATGGGaggatttggtt > 2:1666113/1‑141 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGGTCAGAAAAAAAGACAAGCAA‑A‑TTTTATTTTTCCT‑CCAC‑T‑T‑TGTTT‑AG‑ATGAGGAACATGG‑AAATTA‑A‑TC‑GAG‑GGAAaaaa‑aaatagagtgcattggca > 1:1189736/1‑137 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGGTCAGAAAAAAAGAAATTCACAA‑TTTTTTTTTCCCT‑C‑TT‑T‑G‑TTTTA‑AG‑AATCGAAAAAT‑GAAAATTA‑A‑AG‑GGG‑GGAAAAAA‑AAATGGGatgaatgggtt > 1:1257792/1‑141 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGGTCAGAAAAAAAGAAAAGCAA‑A‑TTTTATTTTTTCT‑CATC‑TGG‑TTTTA‑AA‑AGGGGAAAAAT‑A‑AAATT‑‑A‑AA‑AGA‑GGAAAAAT‑AAATGGGGATGA‑TTggggt > 1:991024/1‑148 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGGCCCGAAAAAAAGACAAGGAC‑A‑TTTTATTTTTCCT‑CCTC‑T‑G‑TTTTT‑AG‑AAGCGGAAAAT‑G‑AAAATC‑A‑AA‑GGA‑GGAAAAAT‑AAAATGGGATGA‑tttggta > 1:53815/1‑146 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGGCCCGAAAAAAAGAAAAGGAC‑A‑TTTTATTTTTCCT‑CATT‑T‑G‑TTTTT‑AGAAGGGGAAAAAG‑A‑AAATTT‑A‑AG‑GGG‑GGAAAAAA‑AATTGGGAA‑GA‑ATGGCTa > 2:807671/1‑151 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGGCCAGAAAAAACGACATGCCC‑A‑TTTTTTTTTTCCC‑CATC‑T‑G‑TTTTT‑AG‑ATGCGGAAAAA‑G‑AAAATT‑A‑AA‑GGG‑GGGAAAAA‑AAATGGGGATGA‑tttggta > 2:1024842/1‑146 (MQ=255) gtgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGGCCAGAAAAAACGACATGCAC‑A‑TTTTTTTTTTCCT‑CCTC‑T‑G‑TTTTT‑AG‑AAGCGGAACAT‑G‑AAATTC‑A‑AC‑GGG‑GGGAAAAA‑AAATGGGGATGA‑TTGGCTa > 2:110580/1‑151 (MQ=255) tgtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTa < 2:1178425/150‑1 (MQ=255) gtTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTTCCGAAAAAAAGACAAACCA‑A‑ATTTATTTTTTCT‑CCTC‑T‑G‑TTTTT‑AA‑ATAAGAAACAT‑G‑AAATTC‑A‑AC‑CGA‑GGGAAAAA‑AAATTGTGATGA‑TTGGGTAtt > 1:1182684/1‑151 (MQ=255) tataACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTAtttt < 2:625458/151‑1 (MQ=255) ttG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGGTCAGAAAAAACGAAATGCAC‑A‑TTTTTTTTTTTCT‑TATT‑T‑G‑TTTTT‑AT‑AATCGAAAAAA‑G‑AAAATT‑A‑AC‑TGA‑GGGAAAAA‑AAATTGGAAAGA‑TTTGCTATTTTTCAaaaa > 1:666775/1‑151 (MQ=255) g‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGGCCAGAAAAAAGGACATGCAC‑A‑TTTTTTTTTTCCT‑CATC‑T‑GTTTTTA‑AA‑AGGGGAAAAAA‑A‑AAATT‑‑A‑AA‑GGA‑GGGAAAAT‑AAATTGGGATGA‑TTGGGttttttttcaaaaat > 2:1688894/1‑142 (MQ=255) ttATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCCGAAAAAACCATAAGTCC‑ATTTTTTTTTTTCCT‑CTCC‑G‑T‑TTTTAGAG‑TTGCAAAACA‑‑A‑AATTTT‑A‑AC‑‑GA‑GGGAAAAT‑AAATGGGGATGG‑ATGGGTTTTTTTCAGaaaatt > 1:1143926/1‑148 (MQ=255) ttATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGGCCAGAAAAAAAGACATGCAC‑A‑ATTTTTTTTTCCT‑CATC‑T‑G‑TTTTT‑AA‑AAGGGAAAAAT‑G‑AAAATT‑A‑AC‑GGG‑GGGAAAAA‑AAATAGGGATGA‑TTGGCTAttttttaaaaaatt > 2:1129124/1‑141 (MQ=255) ataCAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATTA‑TTGGCTATTTTGCAGAAATTGAc < 1:612228/151‑1 (MQ=255) acaacaGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTc < 1:545213/151‑1 (MQ=255) caacaGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCCGAAAAAACGACATGCCC‑C‑TTTTTTTTTTCCC‑CCTC‑C‑T‑TTTTT‑AA‑ATGCGAAAAAT‑G‑AAATTC‑A‑AC‑GGG‑GGAAAAAT‑AAAATGGGATGG‑TTGGGTATTTTTGAGaaaattaatca > 2:45600/1‑143 (MQ=255) caacaGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTTCCT‑CCTC‑T‑G‑TTTTA‑AG‑ATGCGAAACAA‑G‑AAATTC‑A‑AA‑GGA‑GGAAAAAT‑AAATGGGAATGT‑TTTGCTATTTTTTAGAAATTAAccta > 2:414174/1‑148 (MQ=255) caacaGTAAATAATAAAAATTTCTCGAGGC‑GGGGCCAGAAAAAAAGACAAACAC‑A‑TTTTATTTTTTCC‑CTTCTT‑G‑TTTTA‑A‑‑AAGCGGAAAAA‑G‑AAAATC‑T‑AA‑GGAGGGAAAAAA‑AAAAGGGAAGAA‑TTGG‑TAttttttcgaaaatgaacta > 1:1166955/1‑136 (MQ=255) aacaGTAAATAATAAAAATTTCTCGAGGC‑GGGGGCAAAAAAAAGGAAAAGCAC‑A‑TTTTATTTTTCCT‑CCTC‑T‑G‑TTTTT‑AG‑ATGCGGAACAA‑G‑AAAATT‑A‑AA‑CGA‑GGGGAAAA‑AAATAGGGATGA‑TTTGGTATTTTTTAGAAAATTACTCAg > 1:1613238/1‑151 (MQ=255) acaGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAACGACACGCAC‑A‑TTTTTTTTTTCCC‑CCCC‑T‑T‑TTTTT‑AG‑ATGGGAAAAAA‑A‑AAAATT‑A‑AA‑GGA‑GGAAAAAA‑AAAATGGAAAGA‑TTTGGTTTTTTTCAGAAAATTACTCaaa > 2:1535162/1‑149 (MQ=255) acaGTAAATAATAAAAATTTCTCGAGGC‑GGGGTCAGAAAAAAAGAAAAGAAC‑A‑ATTTATTTTTCCC‑CATC‑T‑G‑TTTTT‑AG‑AAGCGAAAAAT‑G‑AAAATT‑A‑AC‑GGA‑GGAAAAAA‑AAATTGGTATGATTTGGTAATTTTGTAGAAAtgacatcaa > 1:129857/1‑143 (MQ=255) caGTAAATAATAAAAATTTCTCGAGGC‑GGGCACAGAAAAAAACAAAAGATC‑A‑TTTTTTTTTTTCT‑TTAC‑T‑G‑GTTTT‑AG‑AAGAGGAACAA‑T‑AAAATC‑ACAA‑GGG‑GGAAAAA‑‑AAAAGGGGATGA‑TTGGGTATTTTGCATAAAATGACATAGaa > 1:589434/1‑151 (MQ=255) aaaTAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGa < 2:1550047/151‑1 (MQ=255) aataatAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGAt < 2:903161/151‑1 (MQ=255) taaAAATTTCTCGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAAcc < 2:1230660/151‑1 (MQ=255) aaaaaTTTCTCGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCa < 2:275522/151‑1 (MQ=255) aaaaaTTTCTCGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATGTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCa < 1:577171/151‑1 (MQ=255) tttCTCGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGc < 1:1024795/151‑1 (MQ=255) cGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAg < 2:926201/151‑1 (MQ=255) ggTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTa > 2:748310/1‑148 (MQ=255) ccAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGaaa < 1:1243150/151‑1 (MQ=255) ccAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGaaa < 1:739145/151‑1 (MQ=255) gAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGaaaaa > 1:812550/1‑150 (MQ=255) gAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGaaaaa > 2:1771933/1‑150 (MQ=255) aaaaaGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAAcc < 1:827227/151‑1 (MQ=255) aaGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCttt > 1:190467/1‑151 (MQ=255) cGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGAt < 1:747948/151‑1 (MQ=255) cGACATGCAC‑A‑TTTTATTTTCACT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGAGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAGCCAACTGCATGAGTCTACTGAAAAGCCTTTGAt < 1:864937/151‑1 (MQ=255) gCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGAtatgt > 2:1458680/1‑145 (MQ=255) c‑a‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTG‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAatat < 1:275325/151‑1 (MQ=255) c‑a‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAGAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAatat < 2:1047912/151‑1 (MQ=255) c‑a‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAatat < 1:5729/151‑1 (MQ=255) c‑a‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAatat < 1:536347/151‑1 (MQ=255) c‑a‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAatat > 1:329772/1‑151 (MQ=255) c‑a‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAatat > 1:1043535/1‑151 (MQ=255) c‑a‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAatat < 1:297209/151‑1 (MQ=255) c‑a‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAatat > 2:1320604/1‑151 (MQ=255) c‑a‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAatat < 1:1749437/151‑1 (MQ=255) c‑a‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAatat < 1:1073874/151‑1 (MQ=255) a‑ttttattttCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAAtata < 2:823436/151‑1 (MQ=255) ttttattttCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATAc < 2:1130770/151‑1 (MQ=255) ttttattttCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATAc < 1:1720887/151‑1 (MQ=255) tttattttCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACa < 2:812968/151‑1 (MQ=255) ttattttCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACAt > 1:1019259/1‑151 (MQ=255) tattttCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATg < 2:783231/151‑1 (MQ=255) tattttCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATg > 1:1437380/1‑151 (MQ=255) tCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACCCAGAAAAGATTAACCAACTGCTTGAATCTACTGAAAAACCTTTGATGGATAATATACATGACACg > 2:620442/1‑151 (MQ=255) tCCCT‑CATC‑C‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAAACTTTGATGGATAATATACATGACACg > 1:1323426/1‑151 (MQ=255) cccT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACg > 1:156654/1‑150 (MQ=255) cccT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACg > 2:1054302/1‑150 (MQ=255) | TACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTG‑TTATACAACAGTAAATAATAAAAATTTCTCGAGGC‑GGGTCCAGAAAAAGCGACATGCAC‑A‑TTTTATTTTCCCT‑CATC‑T‑G‑TTTTA‑AG‑ATGCGAAACAT‑G‑AAATTC‑A‑AC‑GGA‑GGAAAAAT‑AAATGGGAATGA‑TTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACG > NC_000913/2386736‑2387032 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |