Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,665,7020CA56.9% 55.0 / 190.4 144A37S (GCG→TCG) gadXacid resistance regulon transcriptional activator; autoactivator
Reads supporting (aligned to +/- strand):  ref base C (42/20);  new base A (0/82);  total (42/102)
Fisher's exact test for biased strand distribution p-value = 2.24e-21
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.36e-13

Only 100 of 144 total aligned reads displayed.

GTGATGAACGAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTACTGTTTATTAAT  >  NC_000913/3665553‑3665851
                                                                                                                                                             |                                                                                                                                                      
gTGATGAACGAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCa                                                                                                                                                       >  1:997753/1‑151 (MQ=255)
gTGATGAACGAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCa                                                                                                                                                       >  1:900022/1‑151 (MQ=255)
gTGATGAACGAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCa                                                                                                                                                       >  1:433220/1‑151 (MQ=255)
      aaCGAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAAcc                                                                                                                                                 <  2:1022175/151‑1 (MQ=255)
        cGAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑Ag                                                                                                                                              >  1:1020638/1‑151 (MQ=255)
           gTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGt                                                                                                                                            >  2:904239/1‑150 (MQ=255)
           gTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGt                                                                                                                                            >  1:438405/1‑150 (MQ=255)
                       cTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTaaa                                                                                                                               >  1:1030432/1‑151 (MQ=255)
                       cTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTaaa                                                                                                                               >  2:1612264/1‑151 (MQ=255)
                       cTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTaaa                                                                                                                               >  2:1264286/1‑151 (MQ=255)
                       cTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTaaa                                                                                                                               >  1:1299237/1‑151 (MQ=255)
                       cTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTaaa                                                                                                                               >  1:436717/1‑151 (MQ=255)
                                gtgCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGata                                                                                                                      >  1:1667521/1‑151 (MQ=255)
                                     tGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGTCATTAAAATAGCGATATTCAc                                                                                                                 <  1:1163962/151‑1 (MQ=255)
                                      aaaGATTTAATCCCCCCCCCATGAGCAGCGGAAAAAAAAATGAAA‑CCGTTCCCTTT‑GCCCAGAAAACAAAATTTA‑C‑ACCCCCCTTATCAACT‑GAAATT‑GG‑C‑TTGGCCCCCGAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCAcc                                                                                                                <  1:60806/150‑1 (MQ=255)
                                         gATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCAtt                                                                                                             >  2:1206951/1‑151 (MQ=255)
                                          aTTTAATCCCTCCTCCTGAACCTTGGGGAAAAATAATAAAA‑GCGT‑TCCCTTGGACA‑GAAAAAAAAAATTT‑A‑AACCCCCTTAACCTCACCAATTT‑GG‑CTTT‑GCACCCCAAAAAACC‑AGGCCACCGCCATTAAAATAGCGATATTCACCAt                                                                                                              <  1:1013247/149‑1 (MQ=255)
                                           tttAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTaa                                                                                                           >  1:495265/1‑151 (MQ=255)
                                            ttatcccctccccctTGAGCAGCGGAAAAAATAATAAAA‑GCGTGCCCCTT‑GACACAAATACAAAATTTT‑C‑ACCACCCTTATCTCCTCAATTTT‑GT‑C‑TT‑GCACCCCCAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAAc                                                                                                          <  1:324130/145‑1 (MQ=255)
                                             tatccccccctcctTGAGCACGGGGAAAAATAAAAAAA‑GGGTTCCCTTT‑GACACAAAAAAAAATTTTC‑C‑AACCCCTTTATCTCCCCAATTTT‑GG‑C‑TT‑CCATCCGAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAAcc                                                                                                         <  2:376732/143‑1 (MQ=255)
                                             tacccccccctcctAGGGTATCGGGAAAAATAATGAAT‑GCGTGCCCCGA‑AACACGAAAAAAAATTTTT‑C‑AACACTCTTATCTACTCAAATTT‑GG‑C‑TA‑ACACCCGAAAAACCC‑GGGCCACCGCCATTAAAATAGCGATATTCACCATTAAcc                                                                                                         <  2:1581685/143‑1 (MQ=255)
                                             tAATGCCTCCTCCTTGTGCA‑GGGGAAAAAAAAAGAAAGGCGTGCCCCTG‑GACAAAAAAACAAAATTTC‑C‑ACCCCACTTATCTACT‑AAATTT‑GGCC‑TT‑GCACCCAAAAAACCC‑GGGTCACCGCCATTAAAATAGCGATATTCACCATTAAcc                                                                                                         <  1:1364978/151‑1 (MQ=255)
                                             tAATGCCTCCTCCTTGAGCATCGGGAAAAATAATGAAA‑GCGTGTCCCTT‑GCCACAAAAAAAAAATTTT‑C‑AACACACTTATCTCCTCGAATTT‑GG‑C‑TT‑GCACCCGAAAAAACC‑AGGACACCGCCATTAAAATAGCGATATTCACCATTAAcc                                                                                                         <  2:1362252/151‑1 (MQ=255)
                                             tAATCCCCCCTCCTGGAAAATGGGGAAAAATAATAAAG‑GCGTGTCCCTT‑GAAACAAAAAAAAAATTTT‑C‑AACACACTTTTCTCCTCAATTTT‑GG‑C‑TT‑GCACCCGAAAAACCC‑AGGCCACCGCCATTAAAATAGCGATATTCACCATTAAcc                                                                                                         <  2:830535/151‑1 (MQ=255)
                                                 gCCTCCTCCTTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATgg                                                                                                     >  2:721796/1‑151 (MQ=255)
                                                 ccccccccctTAAGCTTGGGGAAAAATAATGAAA‑GGGTGTCCTTT‑GACACAAATAAAAATTTTA‑C‑ACCACCTTTTCCTCCTCAAATTG‑GG‑T‑TT‑ACACCCGAAAAAACC‑AGGCCACCGCCATTAAAATAGCGATATTCACCATTAACCATgg                                                                                                     <  1:571245/144‑1 (MQ=255)
                                                   ctccccctTGAGCTTGGGAAAAAATAATAAAA‑CCGTTTCCCTT‑GAAACAAATACAAATTTTC‑C‑AACCCCCTTATCTCCTCAATTTT‑GG‑C‑TT‑GCACCCACAAAAACC‑AGTCCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTg                                                                                                   <  2:1634422/151‑1 (MQ=255)
                                                   ccccccctTGAGCATGGGGAAAAAAAAGAAAA‑GCGTGCCCCTT‑GACACAAATAAAAAATTTC‑C‑AACCCCCTTATCTACTCAATTTT‑GG‑C‑TT‑GCACCCAAAAAACCC‑GGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTg                                                                                                   <  2:711318/146‑1 (MQ=255)
                                                    tcctcctTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTga                                                                                                  >  1:996199/1‑151 (MQ=255)
                                                     cctcctTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TC‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTgag                                                                                                 >  1:1678210/1‑151 (MQ=255)
                                                       tcctTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGaa                                                                                               >  2:1529700/1‑151 (MQ=255)
                                                       ccctTGAGCATGGGGAAAAAAAAAAAAA‑GCGTGTCCTTT‑GACACGAAAAAAAAATTTT‑C‑AACCCACTTATCTCCTCAATTTT‑GG‑C‑TT‑GCACCCGAAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGaa                                                                                               <  2:1517416/150‑1 (MQ=255)
                                                        cctTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAat                                                                                              >  2:909032/1‑151 (MQ=255)
                                                             accATCGGAAAAAATAATGAAA‑GCGTGTCCTTT‑ACCACAAAAAAAAAATTTT‑C‑AACACCCTTATCTCCCCGAATTT‑GG‑C‑TT‑CCACCCGAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATAtt                                                                                         <  2:1207647/149‑1 (MQ=255)
                                                             acaatgggaaaaaaaaaTGAAA‑GCGTGTCCCTT‑AACAAAAAAAAAAAATTTT‑A‑ACCACACTTATCAACTCAATTTT‑GG‑T‑TT‑CCACCCAAAAAAACC‑GGGTAACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATAtt                                                                                         <  1:1244607/140‑1 (MQ=255)
                                                               cagggggAAAAATAATAAAA‑GCGTGTCCCTT‑GACACAAATACAAAATTTT‑A‑AACACACTTATCTACTAAATTTT‑GT‑T‑TT‑GCACCCGAAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATAtt                                                                                         <  1:1656164/145‑1 (MQ=255)
                                                               cATGGGGAAAAATAATAAAG‑GCTTGTCCTTT‑GACACAAATACAAAATTTT‑C‑AACCCACTTATCTACTCGATTTT‑GG‑C‑TT‑GCACCCAAAAAAACC‑AGGACACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATAtt                                                                                         <  1:490727/149‑1 (MQ=255)
                                                               cATCGGGAAAAAAAATGAAA‑GCGTGTCCCTT‑GACAGAAATAAAAAATTTT‑C‑AACCCCCTTATCTACCCGAATTT‑GG‑C‑TT‑GCACCCGCAAAAACC‑AGGCCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATAtt                                                                                         <  2:884937/149‑1 (MQ=255)
                                                               cATCGGAAAAAAAAATGAAA‑GCGTGTCCCTT‑GACACAAATACAAAATTTC‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCACCCAAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATAtt                                                                                         <  2:146325/149‑1 (MQ=255)
                                                               aatggggAAAAAAAAAAAAA‑GCGTTTCCCTA‑CACAAAAACAAAAAATTTA‑A‑AACACACTTATCTTCTAAAATTG‑GA‑C‑TA‑ACACCCAAAAAAACC‑GGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTa                                                                                       <  1:1617574/147‑1 (MQ=255)
                                                               aaTCGGAAAAAATAATGAAG‑GCGTGTCCCTT‑GACACAAATAAAAAATTTC‑C‑AACACATTTATCTACTCAATTTT‑GG‑T‑TT‑CCACCCAAAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATAtt                                                                                         <  1:459030/148‑1 (MQ=255)
                                                                 tggggAAAAAAAATGAAG‑GCGTGTCCCTT‑GACACAAATAAAAAATTTT‑C‑AACCCCTTTACCTCATCAATTTT‑GT‑C‑TT‑CCACCCAAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATg                                                                                     <  1:153069/149‑1 (MQ=255)
                                                                 tCGGGAAAAATAATGAAA‑GCGTGCCCCTT‑GACACGAATAAAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGAAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATg                                                                                     <  2:749833/151‑1 (MQ=255)
                                                                  cggaaaaaaTAATAAAG‑CCGTGTCCTTT‑AACACGAAAACAAAATTAT‑C‑AACCCACTTACCTCCTAAATTTT‑GC‑T‑TT‑CCCCCCAAAAAAACA‑AGTTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGt                                                                                    <  1:1328611/145‑1 (MQ=255)
                                                                  cGGGAAAAATAAAGAAA‑GCGTTCCCCTT‑GCCACAAAAAAAAATTTTT‑C‑AACACACTTATCTACTCAATTTT‑GG‑C‑TT‑CCCCCCAAAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTa                                                                                       <  2:1741846/148‑1 (MQ=255)
                                                                   ggtaaaaaaaaTAAAA‑GCTTGCCCCTT‑GAAACGAATACAAAATTTC‑C‑ACCACTTTTTTTTGCTGAAATTG‑GT‑T‑TT‑GCCTCCGAAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGt                                                                                    <  2:1526795/145‑1 (MQ=255)
                                                                   gggAAAAATAATAAAG‑GCTTATCCCTT‑AACAAGAATAAAAAATTTT‑C‑AACCCCCTTTTCTAGTCAATTTT‑GG‑T‑TT‑CCTCCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGt                                                                                    <  1:1051011/150‑1 (MQ=255)
                                                                   gggAAAAAAAATAAAG‑GCTTTCCCCTT‑GACACAAAAACAAATTTTT‑A‑AACACCTTTCTCTTATCAAATTT‑GG‑T‑TT‑CCTCCCGAAAAACCG‑TGTTCCCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGt                                                                                    <  2:769765/150‑1 (MQ=255)
                                                                     aaaaaaaaaTAAAA‑GCGTGTCCCTT‑GACACAAAAAAAAAATTTT‑C‑AACCCACTTATCTACTAAATTTT‑GC‑T‑TT‑GCACCCGAAAAACCC‑GGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCt                                                                                  <  1:95988/147‑1 (MQ=255)
                                                                        aaaTAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCa                                                                              >  2:1531980/1‑151 (MQ=255)
                                                                        aaaTAATGAAA‑CGGTTTCCCTG‑CTCACAAATACAAAATTTT‑C‑AACCCCCTTTTCTAC‑CGAATTTGGG‑C‑TC‑GCACCCGCAAAACCC‑GGGCCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCa                                                                              <  2:1677450/151‑1 (MQ=255)
                                                                        aaaTAATAAAA‑GCGTGCCCCTA‑AACACGAATAAAAATTTTT‑C‑ACCACTTTTTTCTCCTGAATTTT‑GT‑C‑TT‑CCCCCCGCAAAACCC‑GGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGcn                                                                              <  2:456868/151‑2 (MQ=255)
                                                                           taatGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATa                                                                            >  1:1164469/1‑150 (MQ=255)
                                                                            aatGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACg                                                                          >  2:1624224/1‑151 (MQ=255)
                                                                                    gCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCCCAAAAACC‑CGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTaa                                                                   >  2:260249/1‑150 (MQ=255)
                                                                                       tttCCCTT‑GACCCAAAAAAAAAATTTC‑C‑ACCCCCTTTATCTCCAGGATTTT‑GG‑T‑TT‑GCACCCGAAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGAc                                                                 <  2:970002/148‑1 (MQ=255)
                                                                                       ttccccTT‑GACACAAAAAAAAAATTTA‑C‑AACCCACTTATCTACTCAAATTT‑GG‑T‑TT‑GCACCCACAAAAACA‑GGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGAc                                                                 <  1:766801/147‑1 (MQ=255)
                                                                                       tgtCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACa                                                                >  2:335047/1‑151 (MQ=255)
                                                                                       tgtCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACa                                                                >  2:703975/1‑151 (MQ=255)
                                                                                       tgccccTT‑AACACAAATAAAAAATTTT‑C‑AACACCTTTATCTACTCAATTTT‑GG‑C‑TT‑GCCTCCGAAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGAc                                                                 <  2:177252/147‑1 (MQ=255)
                                                                                         tCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAAt                                                              >  1:748523/1‑151 (MQ=255)
                                                                                                 acacAAAAAAAAAATTTT‑C‑AACACCTTTATCTACCCAATTTT‑GG‑C‑TT‑GCACCCGAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATg                                                       <  2:416091/151‑1 (MQ=255)
                                                                                                    caaaaaaaaaaTTTA‑C‑AACACCCTTATCTCCCCAATTTT‑GG‑C‑TT‑CCACCCAAAAAACCC‑AGGCCCCCGCCATTAAAATAGCGATATCCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAg                                                    <  2:968318/144‑1 (MQ=255)
                                                                                                    caaaTAAAAAATTTT‑C‑AACCCCCTTATCTCCTCAATTTT‑GG‑C‑TT‑GCATCCAAAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAg                                                    <  2:1589422/149‑1 (MQ=255)
                                                                                                    caaaTAAAAAATTTC‑C‑AACACCCTTATCTACTAAATTTG‑GG‑C‑TT‑ACATCCGAAAAAACC‑AGTTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATACTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAg                                                    <  1:1430696/149‑1 (MQ=255)
                                                                                                    cGAATACAAAATTTT‑C‑ACCACACTTATCTCCTCGAATTT‑GC‑T‑TT‑GCACCCGAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAg                                                    <  1:1039905/151‑1 (MQ=255)
                                                                                                    aaaaaaaaaaaTTTT‑C‑AACACACTTATATCCTAGAATTT‑GG‑C‑TT‑GCACCCGAAAAACCC‑GGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAg                                                    <  1:1228905/144‑1 (MQ=255)
                                                                                                    aaaaaaaaaaaTTTA‑A‑AACCCCCTTATCT‑CCCAAATTT‑TG‑G‑TT‑TGACCCGAAAAAACCGGGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAg                                                    <  1:1541442/144‑1 (MQ=255)
                                                                                                    aaaaTAAAAAATTTT‑C‑AACCCCTTTTTCTTCCCGATTTT‑GG‑C‑TT‑ACCCCAGAAAAAACC‑GGGTCCCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAg                                                    <  2:1344269/149‑1 (MQ=255)
                                                                                                     aaaaaaaaaaTTTTAC‑AACCCATTTACCCCCTCGATTTT‑GG‑C‑TT‑GAACCCGAAAAAACC‑GGGTCCCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAg                                                    <  2:518222/145‑1 (MQ=255)
                                                                                                     aaaaaaaaaaTTTT‑CAAACCCCTTTATCTCCTCAATTTT‑GG‑T‑TT‑GCACCCAAAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAg                                                    <  1:880534/145‑1 (MQ=255)
                                                                                                     aaaTACAAAATTAC‑C‑AACTCAGTTATCTAC‑CAAATTTGGG‑C‑TG‑GCACCCAAAAAAACC‑GGGACACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAg                                                    <  1:1401642/149‑1 (MQ=255)
                                                                                                             aaTTTT‑A‑AACCCCCTTATCTCCTCGATTTT‑GG‑C‑TT‑GCACCCAAAAAAACA‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCAt                                           <  2:131563/151‑1 (MQ=255)
                                                                                                              aTTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATa                                          >  2:635776/1‑151 (MQ=255)
                                                                                                                 ttac‑AACACCTTTATCTCCTAGATTTT‑GG‑T‑TT‑ATCCCCGAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGt                                        <  2:1376338/148‑1 (MQ=255)
                                                                                                                  ttcaaaCACCTTTATCTACTCGATTTT‑GG‑C‑TT‑CCATCCGAAAAAACC‑AGTTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGt                                        <  1:1464387/147‑1 (MQ=255)
                                                                                                                         ccacTTATCACCTCAATTTT‑GG‑T‑TT‑CCACCCAAAAAAACG‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTa                                 <  1:533192/150‑1 (MQ=255)
                                                                                                                          cacTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTaa                                >  2:797692/1‑151 (MQ=255)
                                                                                                                          cacTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTaa                                >  1:974338/1‑151 (MQ=255)
                                                                                                                          cacTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTaa                                >  1:1701568/1‑151 (MQ=255)
                                                                                                                            tttATCTACTCAATTTT‑CG‑C‑TT‑GCACCCAAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAata                              <  1:1373624/150‑1 (MQ=255)
                                                                                                                            cTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAata                              >  2:1278758/1‑151 (MQ=255)
                                                                                                                            cTTAACTACTAGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGCCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTACGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGGAGTGATTGCATAGTTGAATTAatt                              >  1:1574811/1‑150 (MQ=255)
                                                                                                                             ttATCTCCTCAATTTG‑GG‑T‑TT‑CCATCCCAAAAAACA‑AGCTAACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAatat                             <  2:47500/151‑1 (MQ=255)
                                                                                                                             ttATCTACTCGATTTT‑GC‑C‑TT‑GCACCCACAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAatat                             <  1:1623416/151‑1 (MQ=255)
                                                                                                                             ttATCTACTCAAATTT‑GG‑T‑TT‑CCATCCACAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAatat                             <  1:1455728/151‑1 (MQ=255)
                                                                                                                             ttATCTACAAAATTTT‑GG‑C‑TT‑CCACCCGCAAAAACC‑GGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAatat                             <  1:321185/151‑1 (MQ=255)
                                                                                                                              tATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATAtt                            >  2:1480742/1‑151 (MQ=255)
                                                                                                                                  tcctaaatttt‑GG‑C‑TT‑GCTCCCGCAAAAACC‑GGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACAt                        <  2:838732/143‑1 (MQ=255)
                                                                                                                                  tactaaaaTTT‑GG‑T‑TT‑GCACCCGAAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACAt                        <  1:1206360/145‑1 (MQ=255)
                                                                                                                                  tACTCGAATTT‑GG‑C‑TT‑CCACCCGAAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACAt                        <  2:1441888/151‑1 (MQ=255)
                                                                                                                                      aaaaTTT‑GG‑C‑TT‑GCACCCGAAAAAACC‑GGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAAc                    <  1:703611/149‑1 (MQ=255)
                                                                                                                                        atttt‑GC‑C‑TT‑CCACCCGAAAAACCC‑GGGTCCCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACat                  <  2:847414/149‑1 (MQ=255)
                                                                                                                                        aaTTT‑TG‑CTTT‑GCATCCAAAAAAACC‑AGGCAACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACa                   <  1:1451158/151‑1 (MQ=255)
                                                                                                                                        aaTTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACat                  >  1:1554890/1‑151 (MQ=255)
                                                                                                                                        aaTTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACat                  >  2:1051194/1‑151 (MQ=255)
                                                                                                                                               g‑C‑TT‑GCCTCCGAAAAAACC‑GGGTAACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTAc             <  2:1523661/150‑1 (MQ=255)
                                                                                                                                               g‑C‑TT‑GCACCCAAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTAc             <  2:823062/150‑1 (MQ=255)
                                                                                                                                                 cttt‑GCACCCGAAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTAc             <  1:178971/148‑1 (MQ=255)
                                                                                                                                                   tt‑GCACCCAAAAAAACC‑AGTTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTACTGt          <  2:1030979/151‑1 (MQ=255)
                                                                                                                                                             |                                                                                                                                                      
GTGATGAACGAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTT‑GACACGAATACAAAATTTT‑C‑AACACACTTATCTACTCGAATTT‑GG‑C‑TT‑GCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTACTGTTTATTAAT  >  NC_000913/3665553‑3665851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑