| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,222,233 | 0 | G | A | 46.0% | 54.1 / 43.6 | 75 | pseudogene (60/75 nt) | ycgH | pseudogene; putative ATP‑binding component of a transport system |
| Reads supporting (aligned to +/- strand): ref base G (32/8); new base A (0/34); total (32/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.27e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
TGAAAGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCA‑GCGGCCA‑GCGTCTGGGGAATGTGGGCGTG‑CAGCT‑GGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAGCG > NC_000913/1222086‑1222374 | tgAAAGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCA‑GCGGCCA‑GCGTCTGGGGAATGTGGGCGTG‑CAGCT‑GGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCT‑Gaaa < 1:687397/151‑1 (MQ=255) tCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCA‑GCGGCCA‑GCGTCTGGGGAATGTGGGCGTG‑CAGCT‑GGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAg < 2:2411/151‑1 (MQ=255) gAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCA‑GCGGCCA‑GCGTCTGGGGAATGTGGGCGTG‑CAGCT‑GGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGtt > 1:1717245/1‑151 (MQ=255) aaGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCA‑GCGGCCA‑GCGTCTGGGGAATGTGGGCGTG‑CAGCT‑GGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGa < 1:212329/151‑1 (MQ=255) aTGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCA‑GCGGCCA‑GCGTCTGGGGAATGTGGGCGTG‑CAGCT‑GGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATc < 1:1737305/150‑1 (MQ=255) ggggCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCA‑GCGGCCA‑GCGTCTGGGGAATGTGGGCGTG‑CAGCT‑GGGTGATAATGGCTACAATGCAACCGCGGTGTGGGGGGGCCT‑GAAA‑TATAAGTTCTAATccc > 1:1068324/1‑150 (MQ=255) aTTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCA‑GCGGCCA‑GCGTCTGGGGAATGTGGGCGTG‑CAGCT‑GGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTa > 1:759294/1‑151 (MQ=255) gaaaaTTAACCTGGGGGAAAAGGGCACCCGAAACCCA‑GCGGCCA‑GCGTCGGGGGAATGGGGGGGTG‑AGGCT‑GGGTGATAATGGCTAAAATGCCCCCGCAGGGAGGGTGGGCCT‑AAAA‑TATAAGTTCTGACCCCGCCGTTAGCTAAAAAAc < 2:1419890/148‑1 (MQ=255) gaaaaTAAAATGTGGCGTAAAGGGCAACAGGAACCCA‑G‑GGCCAGGATTTTGGGGAATGGGGGCGTG‑CAGAG‑GGATGATATTGGCTACAAAGACCCCGCTGGGATGGGGGTGTT‑TAAA‑AAAAACTTCGCATCCCGCCGTTAGCTAAAAAAc < 1:1098531/148‑1 (MQ=255) gaaaaTAAAACTTGGCG‑AAAGGGCCACCCTAAACCAGGCGGCCA‑GCGTCTGGGAAATGGGGGCGGG‑CGGCG‑GGGTAATAATGCCTAAAAGGACCCCGCAGTAATGGGGGGCTT‑AAAA‑TAAAAGTTCTAACCCCGCCGTTAGCTAAAAAAc < 1:1143428/148‑1 (MQ=255) gaaaaTAAAACTGGGCTAAAAGGCCACCCTGAGTCGG‑GCGGCCA‑GGGTGTGGGTAATGTGGGCGTG‑CAGGG‑GGGTAATATCGTATAAAATGCCCCCGTGTTGATGG‑GGGGCT‑GAAATTATAAGTTTTGATCCCGCCGTTAGCTAAAAAAc < 1:571844/148‑1 (MQ=255) aaaTTAAACTTGGCGTAAATGGCAACCTGAATCCA‑GCGGCCA‑GCGTCTGGGGAATGTGGGCGTG‑CAGCT‑GGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACcg > 2:1081089/1‑150 (MQ=255) aaaTTAAACTTGGCGTAAATGGCAACCTGAATCCA‑GCGGCCA‑GCGTCTGGGGAATGTGGGCGTG‑CAGCT‑GGGTGATAATGGATACAATGACACCGCAATGATGGTGGGCCT‑GAAA‑TATAAGTTCTAATCCCGCCGTTAGCTAAAAAACcg > 2:597525/1‑150 (MQ=255) aaaTT‑AACTTGGGGAAAAATGAAACCAGAAACCAGGCGGCCG‑GCGTTGGGAGATTTAGGGGGTG‑GAGCT‑GGGTAATAATGAAAGCAATACCCCCGAAGGGAGGGAGGGCTT‑AAAA‑TAAAATTTCTGATCCCGCCGTTAGCTAAAAAACcg < 2:1380055/150‑1 (MQ=255) tttAAGCTTGGGAAAAATGACACCCGGATCCCA‑GCGGCCA‑GCGTTTGGGAAGGGTGGGGGTG‑GAGGT‑GGGGAAAAATGTCTACAATGACACCGCAGTGGTGGGGGGCAT‑AAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGcgt < 2:1406308/150‑1 (MQ=255) ttGGCGAAAATGGCACCCTAAACCCG‑GCGGCCG‑GCGTCGGGGGAATGGGGGCGTG‑CAGCT‑GGGTGAAAATGGCTAAAATGACCCCGAAGTGAGGGTGGGCCT‑AAAA‑TAAAATTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTc < 2:98837/151‑1 (MQ=255) gggCGAAAAGGGAAACCGGAACCGA‑GCGGCCA‑GCGTGGGGGGAAGGGGGGGGGG‑CGGGG‑GGGTAATAGGGGCAAAAAGGACCCCGCAGGGAGGGGGGGCCT‑AAAA‑AAAAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTc < 2:1074924/149‑1 (MQ=255) ggCGTAAATGGCAACCTGAATCCA‑GCGGCCA‑GCGTCTGGGGAATGTGGGCGTG‑CAGCT‑GGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCAt > 2:1548560/1‑151 (MQ=255) gCGTAAATGGCAACCTGAATCCA‑GCGGCCA‑GCGTCTGGGGAATGTGGGCGTG‑CAGCT‑GGGTGATAATGGCTACAATGACACCGCAGTGATGGCGGGCCT‑GAAA‑TATAAGTTCTGACCCCGCCGTTAGCTTAAAAACCGCGTCGTcatcatg > 1:1621786/1‑150 (MQ=255) ctaaaaTGGCACCCTGAACCCG‑GCGCCCG‑GGGTCTGGGGATTGTGGGCGTG‑GAGCG‑GGGTGATATTGCCTACAATGCCCCCGCGTTGAGGGTGGGCCT‑AAAA‑TAAAATTTCGGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATc < 2:453725/147‑1 (MQ=255) gTAAATGGCAACCTGAATCCA‑GCGGCCA‑GCGTCTGGGGAATGTGGGCGTG‑CAGCT‑GGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGa > 2:699142/1‑151 (MQ=255) aaaaTGGAACCCTAAATCCG‑GGGCCCG‑GGCTCGGGGGAGTGGGGGGGTG‑CGGCT‑GGTATAAAAGAGCTCAAATGCCCCGGCAGTGAGGGGGGGCCT‑AAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGAc < 2:259775/150‑1 (MQ=255) aaTGGAAACCAGAAACCG‑GGGCCCA‑GCGTTGGGGGAATGGGGGGGGG‑CAGTT‑GGGTAAAAATGGCTAAAAAGCCCCCGGAGTGTGGGGGGCCCT‑AAAA‑AATAATTTCTGTCCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGAcgc < 1:921435/151‑1 (MQ=255) aaTGACAACCTGAACCCA‑GCGGCCA‑GCGTCGGGGAAATGGGGGCGGG‑CGGGT‑GGGGAATAAGGGCTACAAGACCCCCGAAGTGAGGGTGGCCTT‑AAAA‑TAAAGGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGAcgc < 1:1283082/151‑1 (MQ=255) tGGCAACCTGAATCCA‑GCGGCCA‑GCGTCTGGGGAATGTGGGCGTG‑CAGCT‑GGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCgg > 1:956389/1‑151 (MQ=255) cacccgaaacccA‑GGGGCCA‑GCGTCGGGGGAGTGGGGGCGTG‑CCGCT‑GGGTGATAAGGGCTACAATGACCCCGCGGTGAGGGGGGGCCT‑AAAA‑TATAAGTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTAc < 1:240193/141‑1 (MQ=255) ccTGAATCCA‑GCGGCCA‑GCGTCTGGGGAATGTGGGCGTG‑CAGCT‑GGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACata > 1:804087/1‑151 (MQ=255) taaacccA‑GGGGCAA‑GGGTCGGGGGAAGGTGGGCGTG‑CTGCT‑GGGTAAAAAGGGCACAAAAGACCCCGCAGGGAGGGGGGCCCA‑AAAA‑TATAAGTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATg < 2:1692108/146‑1 (MQ=255) tGAAGCCG‑GCGGCCA‑GCGGGGGGGGAATGGGGGGGGG‑CTGCG‑GGGTGATATTGCCTAAAATTACCCGGCAGTGAGGGGGGGCCT‑AAAA‑AATAAGTTGAGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATg < 2:589313/151‑1 (MQ=255) tGAACCCG‑GCGGCCA‑GGGTCGGGGGAAGGTGGGGTGG‑GGGGG‑GGGTGATATGGGCAACAAGGACGCCGCGGGGATGGGGGGCAG‑GAAA‑AATAGTTTTTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATg < 2:1320811/151‑1 (MQ=255) tgagcccggcgcCCG‑GCGTCGGGGGAATGTGGGCGTG‑CAGGT‑GGGTGATAATGGCAACAAGGACCCCGCAGTGATGGTGGGCTT‑AAAA‑TATAGTTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATg < 1:818421/143‑1 (MQ=255) taaacccggCGGCCG‑GCGTGGGGGGAGGGGGGGCGGG‑AGGCG‑GGTTAAAAAGGGTTACAATGACCCCGCGGTGAGGGGGGCCCG‑GAAA‑AAAAAGTCCTGTTCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATg < 2:810140/143‑1 (MQ=255) taaaccagggggCCA‑GCGTC‑GGGGAATGGGGGGGTG‑GAGGTGGGGTGATAATGCCAAAAATGCCACCGAAGGGGGGGGGGGCAT‑AAAA‑TATAGGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATg < 1:923098/141‑1 (MQ=255) gAACCCA‑GCGCCCG‑GCTTCGGGGGATTG‑GGGCGGGCCAGGG‑GGGTGATATGGGCTACAATCACCCCGCAGGGGTGGGGGGCTG‑AAAA‑TAAAAGTCTTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATg < 2:1155054/150‑1 (MQ=255) aaacccA‑GCGGCCG‑GCGTGTGGGGAAGGGGGGCGTG‑CGGGT‑GGGTGAAAATGGCAACAATGCCCCCGCAGTGTTGGGGGGCCT‑AAAA‑TATAATTTCTGTTCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATg < 2:770600/146‑1 (MQ=255) gacgccggCGGCAG‑GCGTTGGGGGAAGGGGGGCGGG‑GAGGT‑GGGTGATAAGGGCAACAAGGACCCGGTGGTGAGGGTGGGCCA‑AAAA‑TAAAAGTCCGGCCCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATg < 1:489457/143‑1 (MQ=255) gaccccggcgcCCA‑GCGTGGGGGGAATGGGGGGGTG‑GAGTG‑GGGAAAAAAGGGCTACAATGCCCCCGGAGTGATGGGGGCCAT‑AAAA‑TAAAGTTTCTAACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATg < 1:46154/143‑1 (MQ=255) aacccA‑GCGGCCA‑GCGTCGGGGGAATGTGGGCGTG‑CAGCT‑GGGTGATAATGGCTACAATGACACCGCGGTGATGGGGGGCTT‑AAAA‑TATATGTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATg < 1:1481849/146‑1 (MQ=255) aacccggCGGCAA‑GCTTCGGGGAAGTGTGGGCGTG‑GAGGT‑GGTAAATAATGCCTAAATTGCCCCCGCAGTGAGGGTGGGCCT‑AAAA‑TATAAGTTCTAATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGaa < 1:937993/145‑1 (MQ=255) taaaaagagaaaggATTGGGGGGGTG‑CAGGG‑GGTTAAAAAGGCCTAAAATGACCCCGAGGTGAGGGGGGGCCT‑AAAA‑TAAAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTAttt < 2:492472/139‑1 (MQ=255) ccA‑GCGTGGGGGGAATGGGGGGGGG‑CAGGG‑GGGTGATAATGGCAAAAATGACCCCGGAGGGAGGGGGGGCCT‑AAAA‑AATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTAtttt < 2:659442/151‑1 (MQ=255) tCTGGGGAATGTGGGCGTG‑CAGCT‑GGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCg > 2:1552422/1‑151 (MQ=255) cTGGGGAATGTGGGCGTG‑CAGCT‑GGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGa > 2:779620/1‑151 (MQ=255) gAATGTGGGCGTG‑CAGCT‑GGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTAttt > 1:492285/1‑138 (MQ=255) gAATGTGGGCGTG‑CAGCT‑GGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCa > 2:32879/1‑151 (MQ=255) gAATGTGGGCGTG‑CAGCT‑GGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCa > 2:280864/1‑151 (MQ=255) gAATGTGGGCGTG‑CAGCT‑GGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCa > 2:1650295/1‑151 (MQ=255) ggg‑CAGCT‑GGGTAATAATGGCTACAATGCCCCCGAAGTGATGGTGGGCAT‑AAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGgtg < 1:1272118/148‑1 (MQ=255) gTG‑AAGTT‑GGGTGAAAATGGTAAAAATGCCCCCGCAGTGTTGGGGGGCCT‑AAAA‑TAAAATTTTTTACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGgtg < 2:1472065/150‑1 (MQ=255) gtgcggtggggTGATAATGGCTAAAATGACACCGAAGGTAGGGGGGGCCT‑AAAA‑TATAAGTTTTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGgtg < 2:582352/142‑1 (MQ=255) gt‑GGGTAAAAATGGCTACAAGGACCCGGAAGGGAGGGGGGCCAA‑AAAA‑TATAAGTGTGAACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGtcatc < 1:440788/148‑1 (MQ=255) cT‑GGTTGATAAGGGCAACAAGGACCCCGAGGTGAGGGGGGGCTT‑AAAA‑TAAATGTTCTGGTCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGtcatc < 1:1347788/149‑1 (MQ=255) gggTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAAtt > 1:1044814/1‑151 (MQ=255) gggTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAAtt > 1:1541061/1‑151 (MQ=255) gTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGGGTCATCAATTg > 2:1593934/1‑150 (MQ=255) gTGATAATGGCTAAAATGCCCCCGCAGGGAGGGGGGGCCT‑AAAA‑TATAATTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTg < 2:467176/150‑1 (MQ=255) ggaaaaggccTAAAATGACCCCGCAGTGAGGGGGGGCCT‑AAAA‑TATAAGTTTTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGc < 2:1330006/141‑1 (MQ=255) tGGCAACAATGACACCGCAGTGAGGGGGGGCTT‑AAAA‑TATAATTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATc < 2:957741/151‑1 (MQ=255) ggCCACAATGACACTGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGGATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGCGTCATCAATTGCCGAGAGCa > 1:407122/1‑151 (MQ=255) gCTACAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCaa > 1:386925/1‑151 (MQ=255) caaaaaTAACACCGAAGTGAGGGGGGGCAT‑AAAA‑TATATTTTCGGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAAc < 1:1173174/147‑1 (MQ=255) cTAAAATGACACCGCAGTGGGGGGGGCCCA‑AAAA‑TAAAATTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAAc < 2:1308692/151‑1 (MQ=255) tACAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACa > 2:1438975/1‑151 (MQ=255) cAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAg > 2:336696/1‑150 (MQ=255) acacCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTg > 2:538278/1‑151 (MQ=255) ccGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCgg > 1:1086142/1‑151 (MQ=255) ccGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCgg > 2:935595/1‑151 (MQ=255) ccGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCgg > 1:483190/1‑151 (MQ=255) ccGCAGTGATGGCGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCgg > 1:1424000/1‑151 (MQ=255) cGCAGGGGTGGGGGGCGG‑AAAA‑GATAATTTCGGGCCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCggg < 2:1723511/151‑1 (MQ=255) cAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGtcatca > 1:345332/1‑122 (MQ=255) cAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGt > 2:350628/1‑150 (MQ=255) gTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCtt > 1:974783/1‑151 (MQ=255) aTGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAg > 2:981244/1‑151 (MQ=255) tggGCCTAGAAA‑TAAATTTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAgcg < 1:568983/150‑1 (MQ=255) | TGAAAGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCA‑GCGGCCA‑GCGTCTGGGGAATGTGGGCGTG‑CAGCT‑GGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCT‑GAAA‑TATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAGCG > NC_000913/1222086‑1222374 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |