| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,133,302 | 0 | T | G | 48.4% | 105.5 / 47.0 | 97 | H219P (CAC→CCC) | yghS | putative ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (5/45); new base G (47/0); total (52/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.94e-22 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTAGTTGGGCTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTCCTGTAACGCTG‑CCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGACGAATCAACAATACGGG > NC_000913/3133156‑3133450 | gTAGTTGGGCTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCg > 2:1354787/1‑151 (MQ=255) tAGTTGGGCTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑Ggggtgg > 1:153325/1‑148 (MQ=255) gCTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATcc < 1:476829/150‑1 (MQ=255) gCTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATcc < 2:152116/150‑1 (MQ=255) gCTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATcc < 1:1162412/150‑1 (MQ=255) gCTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑gcccacca > 2:254970/1‑146 (MQ=255) cTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAg < 2:29589/151‑1 (MQ=255) cTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAg < 1:56861/151‑1 (MQ=255) cggcgCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTc < 1:1189925/151‑1 (MQ=255) cggcgCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCCTcccggt > 1:197048/1‑146 (MQ=255) cgGTTGTACTATTAACAGTTTGCATTTGTAGTGCATCCATTCGTTAAATCATCCCCTATACATGTTGGTGATCAGGAAAGCGCGGCGTGAATGGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGa < 1:1107021/151‑1 (MQ=255) cgGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGa < 2:1344852/151‑1 (MQ=255) cgGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGa < 2:1584608/151‑1 (MQ=255) cgGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGa < 1:1561610/151‑1 (MQ=255) cgGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGa < 2:1094069/151‑1 (MQ=255) cgGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGa < 2:6023/151‑1 (MQ=255) cgGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGa < 2:1535488/151‑1 (MQ=255) gTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCCTCCCC‑TTCAAGGAt > 2:691821/1‑150 (MQ=255) gTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCATTCCG‑TTCAAAGAt > 1:1402440/1‑150 (MQ=255) gTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCATCCCG‑tttcagggt > 1:455758/1‑143 (MQ=255) gTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCATCCAG‑TTTaaagga > 2:919975/1‑146 (MQ=255) gTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCATCCAG‑TTCAAGGAt > 2:275531/1‑150 (MQ=255) gTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCCTCCCA‑TTTAAGGGTCttt > 1:489035/1‑151 (MQ=255) gTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCATccccctttacggtcttt > 2:1721462/1‑136 (MQ=255) aCTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTTG‑CCCCTCCCG‑TTTaaagggctttt > 2:546925/1‑141 (MQ=255) aCTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCATCCAG‑TTCCAGGATCtttt > 1:1201343/1‑149 (MQ=255) aCTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGGGAATTGCGCGTAGTGACGCTTGCAGAATTTCAACGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTgc < 2:715505/151‑1 (MQ=255) cTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTGG‑CCCATCCCG‑TTCAAGGAGCTTTtcg > 1:965945/1‑151 (MQ=255) cTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCATCCCG‑TTCTAGGATCtttttg > 1:414816/1‑148 (MQ=255) cTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGGCG‑CCCCTCCAG‑TTCAAGGATCTTTtcg > 1:31569/1‑151 (MQ=255) tATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTgcgc < 1:695908/151‑1 (MQ=255) tATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTgcgc < 2:726321/151‑1 (MQ=255) aTTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGcc < 1:696973/151‑1 (MQ=255) aTTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGGCG‑CCCCTCCCA‑TTCaaagcactttttgg > 1:187677/1‑138 (MQ=255) aTTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTTG‑CCCCTCCAG‑GTCCAGGATCtttttgc > 1:683656/1‑146 (MQ=255) aTTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGGCG‑CCCATCCAG‑CTTAAgtgtattttcgc > 1:1126536/1‑139 (MQ=255) cAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCCTTCCG‑GTCCAGGAGCTTTTTGCCacttt > 2:725847/1‑147 (MQ=255) gtttgagtttgTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCCTCCCG‑TTCAAGGATCTTTTCGCCCTTTaaa > 2:279195/1‑150 (MQ=255) gtttgagtttgTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCATCCCG‑TTCAAAGATCTTTTCGCCATTGAAt > 1:702000/1‑151 (MQ=255) tttgagtttgTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTg < 1:1565225/147‑1 (MQ=255) ttgagtttgTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGt < 1:1493197/151‑1 (MQ=255) ttgagtttgTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGt < 2:1157374/151‑1 (MQ=255) ttgagtttgTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGt < 1:262757/151‑1 (MQ=255) ttgagtttgTAGTGCATCCATTCGTTAAATCAGCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGt < 2:317629/151‑1 (MQ=255) gagtttgTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGGCG‑CCCCTCCCG‑GTCCAAGATCTTTTCGCCATTTAATTTCa > 2:606138/1‑151 (MQ=255) gagtttgTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGGCG‑CCCCTCCAG‑TTCAAGGATCTTTTCGCCATTGAATGGCa > 2:645507/1‑151 (MQ=255) agtttgTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCCTCCAC‑TTCAAGGATCTTTTCGCCCTTGAAttttag > 2:891077/1‑146 (MQ=255) agtttgTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCCTCCAG‑TTCAAGGATCTTTGTGCCATTGAATGTCAg > 1:1529756/1‑151 (MQ=255) agtttgTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCATCCCG‑TTCAAGGGTCTTTGCGCCCTTGAATGttcg > 2:433840/1‑148 (MQ=255) gTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTTG‑CCCCTCCCG‑GTCAAGGGTCTTTTCGCCCtttgattgcagtttcg > 2:773210/1‑137 (MQ=255) gTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCCTCCCG‑TTCAAGGGTCTTTTCGCCATTGTATGttcgtttgg > 2:990477/1‑143 (MQ=255) gTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCCTCCAG‑TTCAAGGATCTTTTCGCCATTGAATGTCCGTTggggcg > 1:336990/1‑151 (MQ=255) gTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCACCCAG‑TTCAAAGATATTTGCGGCCTTGAATTTCAGTTgcggcg > 1:1495852/1‑151 (MQ=255) gTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGAGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGGTG‑CCCATCCCG‑GTCCAGGAACTTTTGGCCCTTGAATGtttgtcgggggg > 2:1647536/1‑140 (MQ=255) tCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACg < 1:298214/151‑1 (MQ=255) ccATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACgg < 1:97265/151‑1 (MQ=255) ccATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACgg < 1:1349076/151‑1 (MQ=255) cGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCCTCCAG‑TTCAAAGGTCTTTTCGCCCTTTAATGTCAGTTGCGGGGGAAAGGC‑GAtt > 2:516839/1‑151 (MQ=255) cGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGGCC‑CCCCTCCAG‑TTCCAAGATCTTTGCGCCCTTGGATGGCAGTTGCGGCGGTACGGC‑GGtt > 1:17318/1‑151 (MQ=255) cGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCCTGCAGAATTTCATCGGCGG‑GGGGGGG‑TCCCAGCAG‑TTTAATGTTCTTTTCGGCCATGTAAGTCAGTTGTGGGGTTAAGGC‑gggt > 1:504073/1‑148 (MQ=255) ttAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGGCG‑CCCCTCCAG‑TTTAAGGATCTTTTCGCCATTGGATGTTAGGTTCGGGGTGACGGC‑GGtttt > 1:289559/1‑151 (MQ=255) aaTCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGGCG‑CCCATCCAG‑TTCAAGGATCTTTTTGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GAttttttt > 1:147261/1‑150 (MQ=255) atcatcCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTcc < 2:356210/151‑1 (MQ=255) atcatcCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCCTCCAG‑TTCCAGGGTCTTTTCGCCCTTGAATGTCCGGTGCGGCGTAACGGC‑GGttttttt > 2:1391396/1‑149 (MQ=255) tcatcCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGGTG‑CCCAACCAG‑GTCAAGGAGCTTTGCGCCATTGAATGTCAGGTGCGGCGTAAACGG‑GAttttttt > 1:1392026/1‑148 (MQ=255) ccccTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCCTCCAG‑TTTAAGGATCTTTTCGCCATTGAATGGCAGGTGCGGCGGAACGGC‑GGTTTTTTTCTTTaa > 2:1326230/1‑151 (MQ=255) ccTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCCTCCAG‑TTCAAGGATCTTTTCGCCCTTGAATGTCAGTTGCGGGGTAACGGG‑GGTTTTTTTCTTTaaag > 2:461386/1‑149 (MQ=255) aTCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCCTCCAG‑TTCAAGGATCTTTTTGCCCTTTGATGTTAGTTGCGGCGGAACGGC‑GGTTTTTTTCTGttaag > 1:1421224/1‑144 (MQ=255) aTCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCCTCCAG‑GTTAAGGATCTTTTTGCCATTGAATGTCAGTTGCGGCGGAACGGC‑GATTTTTTTCTTTTACg > 1:1080261/1‑148 (MQ=255) ccATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGGCG‑CCCCCCCAG‑TTCCAGGGTCTTTTTGCCCTTTGATGTCCGTTTCGGCGTAAAGGC‑GGttttttttttttaccctgc > 1:404657/1‑137 (MQ=255) gATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGGTG‑CCCCCCCCG‑GTCAAAGGGCTTTGCGCCCTTTTATGTCAGGTGCGGCGGGACAGCGGGTTTTTTCTTTTAAGGCTC‑CCAttttgggg > 1:1289812/1‑146 (MQ=255) gATCAGGAAAGCGCGGCGTGAATTGCGCGCAGTGACGCTTGCAGAATTTCATCGGCGGCGGGGTC‑‑CCCCTCCCA‑TTCAAAGGGCCTTTCGCCCTTGTATGTCTGGTTCGGGGGAAAGGG‑GGATTTTTTCTCTCACGCTG‑CCCGTtggtggg > 1:565691/1‑150 (MQ=255) aGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGGCG‑CCCCTCCCG‑TTCCAGGATCTTTTTGCCCTTTGATTTTAGGTTCCGCGTTACGGC‑GGTTTTTTTCTTTTAAACTG‑CCACTttgtggggagg > 1:110979/1‑146 (MQ=255) ggAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCGCCCCACCCGT‑TTCAAGG‑TCTTTGCGCCCTTGAATGTCAGGTGCGGCGGAACGGC‑GGTTTTTTTCTGTAACGCTG‑CCAGTTGGTGGTCAggg > 1:1058478/1‑150 (MQ=255) ggAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCATCCCG‑TTCAAGGATCTTTGCGCCCTTGAATGTCAGTTGCGGCGGAACGGC‑GGTTTTTTTCTGTAACGCTG‑CCCGTTGGGGGGCAggg > 2:1335762/1‑150 (MQ=255) gAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTCCTGTAACGCTG‑CCAGTTGGTGGTCAgg < 1:279104/149‑1 (MQ=255) cgcgGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTCCTGTAACGCTG‑CCAGTTGGTGGTCAGGTTTAcg < 1:1646703/150‑1 (MQ=255) cggcgTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTCCTGTAACGCTG‑CCAGTTGGTGGTCAGGTTTAcgcg < 1:989934/150‑1 (MQ=255) cggcgTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTCCTGTAACGCTG‑CCAGTTGGTGGTCAGGTTTACgcgc < 2:1653984/151‑1 (MQ=255) gcgTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCCTCCAG‑TTCAAGGGTCTTTTCGCCCTTGAATGTCAGTTGCGGCGTAACGGC‑GGTTTTTTTCTGTTACGCTG‑CCCGGTTGGGGGCAGGGTTTCGCGCaa > 2:1078172/1‑151 (MQ=255) tGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTCCTGTAACGCTG‑CCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGtt < 2:31586/151‑1 (MQ=255) tAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑GCCATCCAG‑TTTAAGGATCTTTTCGCCCTTTAATGGCAGGTGCGGCGTAACGGG‑GATTTTTTTCTGTGACGCTG‑CCAGTTGGTGGGCAGGGTTACGCGCAAACGCGGgttgtt > 1:1105354/1‑149 (MQ=255) tAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTCCTGTAACGCTG‑CCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTtc < 1:981234/150‑1 (MQ=255) aCGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTCCTGTAACGCTG‑CCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCaa < 1:792337/150‑1 (MQ=255) cGCTTGCAGAATTTCATCGGCGG‑GGGGGCG‑CCCATCCAG‑TTTCAGGGACTTTGTGCCATTGTAAGTCAGTTTTGGCGTAAAGGC‑GAGTTTTTTCTGTGACGCTG‑CCCGTTGGTGGGGCGGGTTACGCGCAAAACCGGGTTGTtcatttatt > 1:87424/1‑146 (MQ=255) cTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTCCTGTAACGCTG‑CCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGcc < 1:1161170/151‑1 (MQ=255) tGCAGAATTTCATCGGCGG‑GGGGTCG‑CCCCTCCAGTTTCAAGG‑TCTTTGTGCCCTTTTATGGCAGTTGTGGCGCAAACGC‑GGTTTTTTTCTGTTATGCCGTCCCGTTGGGGTGCGGGTTTAGGGCCAAAACCGGTTTGTtctccaagccaa > 1:968661/1‑141 (MQ=255) aaTTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTCCTGTAACGCTG‑CCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGa < 2:979391/148‑1 (MQ=255) aaTTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTCCTGTAACGCTG‑CCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGAc < 2:1287823/149‑1 (MQ=255) aaTTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTCCTGTAACGCTG‑CCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGAc < 2:683988/149‑1 (MQ=255) aaTTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTCCTGTAACGCTG‑CCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGAc < 2:1403101/149‑1 (MQ=255) tCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTCCTGTAACGCTG‑CCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGACGAATca < 1:589500/151‑1 (MQ=255) aTCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTCCTGTAACGCTG‑CCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGACGAATcaac < 1:275441/151‑1 (MQ=255) cggcgg‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTCCTGTAACGCTG‑CCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGACGAATcaacaa < 2:1428451/151‑1 (MQ=255) cggcgg‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTGTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTCCTGTAACGCTG‑CCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGACGAATcaacaa < 1:1720574/151‑1 (MQ=255) gcgg‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTCCTGTAACGCTG‑CCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGACGAATCAACAAt < 2:1072193/150‑1 (MQ=255) cgg‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTCCTGTAACGCTG‑CCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGACGAATCAACAATAc < 2:1249175/151‑1 (MQ=255) cgg‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTCCTGTAACGCTG‑CCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGACGAATCAACAATAc < 2:1330186/151‑1 (MQ=255) gtgtCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTCCTGTAACGCTG‑CCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGACGAATCAACAATACggg < 2:1290638/150‑1 (MQ=255) gtgtCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTCCTGTAACGCTG‑CCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGACGAATCAACAATACggg > 1:1285037/1‑150 (MQ=255) | GTAGTTGGGCTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGG‑GGTGTCG‑CCCATCCAG‑TTCAAGGATCTTTGCGCCATTGAATGTCAGTTGCGGCGTAACGGC‑GATTTTTTCCTGTAACGCTG‑CCAGTTGGTGGTCAGGTTTACGCGCAAACGCGGTTTGTTCATCAATGCCAAGACGAATCAACAATACGGG > NC_000913/3133156‑3133450 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |