breseq  version 0.32.1  revision aa8f2595a244 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Marginal read alignment evidence
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	566,173	0	C	G	44.9%	21.0 / 82.9	49	pseudogene (204/279 nt)	exoD	pseudogene, DLP12 prophage, phage‑type exonuclease family,Phage or Prophage Related
*	NC_000913	566,245	0	G	A	44.4%	16.8 / 41.2	36	pseudogene (132/279 nt)	exoD	pseudogene, DLP12 prophage, phage‑type exonuclease family,Phage or Prophage Related
*	NC_000913	4,296,060	0	C	T	44.4%	6.1 / 17.8	18	intergenic (+266/+376)	gltP/yjcO	glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein
*	NC_000913	566,205	0	T	C	43.6%	11.2 / 73.1	55	pseudogene (172/279 nt)	exoD	pseudogene, DLP12 prophage, phage‑type exonuclease family,Phage or Prophage Related
*	NC_000913	566,277	0	C	T	35.7%	45.3 / 36.8	42	pseudogene (100/279 nt)	exoD	pseudogene, DLP12 prophage, phage‑type exonuclease family,Phage or Prophage Related
*	NC_000913	1,420,853	0	G	C	28.6%	21.8 / 10.3	14	R57P (CGT→CCT)	ydaT	Rac prophage, uncharacterized protein
*	NC_000913	566,326	0	T	C	25.0%	34.7 / 11.7	24	pseudogene (51/279 nt)	exoD	pseudogene, DLP12 prophage, phage‑type exonuclease family,Phage or Prophage Related