| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,256,941 | G→A | A357V (GCC→GTC) | yhaO ← | putative transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,256,941 | 0 | G | A | 100.0% | 101.5 / NA | 30 | A357V (GCC→GTC) | yhaO | putative transporter |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (11/19); total (11/19) | |||||||||||
CTACCATGCCGAAAATCGGGCTACAGATAGAGGTGAAGCTCAACACCGGTGCGTTCAGTACGATGGCGCTCCAGGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGGCAGGCATCTTGCGACGCAGGATGTTCATTACGATCCCTTGCGTTGCTTCGCGAAAGCCTAAATAGACGCCAAAGAATGCAGTCATGACAGCAAAGATATTGAGAATGACGCTGACCACTTTCAC > NC_000913/3256807‑3257065 | cTACCATGCCGAAAATCGGGCTACAGATAGAGGTGAAGCTCAACACCGGTGCGTTCAGTACGATGGCGCTCCAGGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGCTTTTCGTTAATCTTCTCgacagg > 1:76412/1‑139 (MQ=255) cGAAAATCGGGCTACAGATAGAGGTGAAGCTCAACACCGGTGCGTTCAGTACGATGGCGCTCCAGGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCg > 1:394435/1‑139 (MQ=255) aaaaTCGGGCTACAGATAGAGGTGAAGCTCAACACCGGTGCGTTCAGTACGATGGCTCTCCAGGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGAc < 2:394435/139‑1 (MQ=255) aaaaTCGGGCTACAGATAGAGGTGAAGCTCAACACCGGTGCGTTCAGTACGATGGCGCTCCAGGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGAc > 2:359509/1‑139 (MQ=255) aaTCGGGCTACAGATAGAGGTGAAGCTCAACACCGGTGCGTTCAGTACGATGGCGCTCCAGGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGc < 2:206824/139‑1 (MQ=255) cGGGCTACAGATAGAGGTGAAGCTCAACACCGGTGCGTTCAGTACGATGGCGCTCCAGGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGCAgg < 2:83643/139‑1 (MQ=255) cGGGCTACAGATAGAGGTGAAGCTCAACACCGGTGCGTTCAGTACGATGGCGCTCCAGGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGCAgg < 1:317430/139‑1 (MQ=255) cGGGCTACAGATAGAGGTGAAGCTCAACACCGGTGCGTTCAGTACGATGGCGCTCCAGGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGCAgg < 2:487869/139‑1 (MQ=255) gggCTACAGATAGAGGTGAAGCTCAACACCGGTGCGTTCAGTACGATGGCGCTCCAGGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGCAGGa < 2:415532/139‑1 (MQ=255) tGAAGCTCAACCCCGGTGCGTTCAGTACGATGGCGCTCCAGGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGCAGGATGTTCATTACGATccc > 1:27756/1‑139 (MQ=255) aaGCTCAACACCGGTGCGTTCAGTACGATGGCGCTCCAGGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGCAGGATGTTCATTACGATCCCtt > 1:102745/1‑139 (MQ=255) cTCAACACCGGTGCGTTCAGTACGATGGCGCTCCAGGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGCAGGATGTTCATTACGATCCCTTGCg < 1:104752/139‑1 (MQ=255) tCAACCCCGGTGCGTTCAGTACGATGGCGCTCCAGGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGCAGGATGTTCATTACGATCCCTTGCGt < 2:27756/139‑1 (MQ=255) aaCACCGGTGCGTTCAGTACGATGGCGCTCCAGGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGCAGGATGTTCATTACGATCCCTTGCGTTg > 2:425742/1‑139 (MQ=255) gTGCGTTCAGTACGATGGCGCTCCAGGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGCAGGATGTTCATTACGATCCCTTGCGTTGCTTcgcg < 2:431089/139‑1 (MQ=255) gTGAGTTCAGTACGATGGCGCTCCATGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGCAGGATGTTCATTACGATCCCTTGCGTTGCTTcgcg < 2:323781/139‑1 (MQ=255) ttCAGTACCATGGCGCTCCAGGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGCAGGATGTTCATTACGATCCCTTGCGTTGATTCGCGAAAGc > 2:326384/1‑139 (MQ=255) aTGGCGCTCCAGGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGCAGGATGTTCATTACGATCCCTTGCGTTGCTTCGCGAAAGCCTAAATAGa < 1:345496/139‑1 (MQ=255) tGGCGCTCCAGGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGCAGGATGTTCa > 2:345510/1‑99 (MQ=255) tGGCGCTCCAGGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGCAGGATGTTCa < 1:345510/99‑1 (MQ=255) cgcTCCAGGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGCAGGATGTTCATTAc < 2:60516/100‑1 (MQ=255) cgcTCCAGGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGCAGGATGTTCATTAc > 1:60516/1‑100 (MQ=255) cAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGCAGGATGtt > 1:362968/1‑81 (MQ=255) cAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGCAGGATGtt < 2:362968/81‑1 (MQ=255) gAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGCAGGATGTTCATTACGATCCCTTGCGTTGCTTCGCGAAAGCCTAAATAGACGCCAAAGAATGCAGTCATGACAGCa < 1:359509/139‑1 (MQ=255) tCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGCAGGATGTTCATTACGATCCCTTGCGTTGCTTCGCGAAAGCCTAAATAGACGCCAAAGAATGCAGTCATGACAGCAAAGat < 1:380905/139‑1 (MQ=255) tgatgCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGCAGGATGTTCATTACGATCCCTTGCGTTGCTTCGCGAAAGCCTAAATAGACGCCAAAGAATGCAGTCATGACAGCAAAGATAtt < 2:102745/139‑1 (MQ=255) aaCGAGATTTTCGTTAATCTTCTCGACAGGCATCTTGCGACGCAGGATGTTCATTACGATCCCTTGCGTTGCTTCGCGAAAGCCTAAATAGACGCCAAAGAATGCAGTCATGACAGCAAAGATATTGAGAATGACGCTg > 2:419484/1‑139 (MQ=255) tCGTTAATCTTCTCGACAGGCATCTTGCGACGCAGGAt > 1:179772/1‑38 (MQ=255) tCGTTAATCTTCTCGACAGGCATCTTGCGACGCAGGAt < 2:179772/38‑1 (MQ=255) cGTTAATCTTCTCGACAGGCATCTTGCGACGCAGGATGTTCATTACGATCCCTTGCGTTGCTTCGCGAAAGCCTAAATAGACGCCAAAGAATGCAGTCATGACAGCAAAGATATTGAGAATGACGCTGACCACTTTCAc < 1:419484/139‑1 (MQ=255) | CTACCATGCCGAAAATCGGGCTACAGATAGAGGTGAAGCTCAACACCGGTGCGTTCAGTACGATGGCGCTCCAGGCCAGCAAAATGGCGAAAATCATGATGCCGCGCTGAACGAGATTTTCGTTAATCTTCTCGGCAGGCATCTTGCGACGCAGGATGTTCATTACGATCCCTTGCGTTGCTTCGCGAAAGCCTAAATAGACGCCAAAGAATGCAGTCATGACAGCAAAGATATTGAGAATGACGCTGACCACTTTCAC > NC_000913/3256807‑3257065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |