| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,385,906 | T→C | L68P (CTC→CCC) | yjeO → | inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,385,906 | 0 | T | C | 100.0% | 63.8 / NA | 18 | L68P (CTC→CCC) | yjeO | inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (10/8); total (10/8) | |||||||||||
ATGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACA > NC_000913/4385801‑4386041 | atGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCCCTGGTTCGCTTTGTGGCGAAAAAAACGCGGCt < 1:485176/138‑1 (MQ=255)atGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCCCTGGTTCGCTTTGTGGCGAAAAAAACGCGGCt > 2:485176/1‑138 (MQ=255) ggACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCCCTGGTTCGCTTTGTGGCGAAAAAAACGCGGCTGGt < 2:386305/139‑1 (MQ=255) cgGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCCCTGGTTCGCTTTGTGGCGAAAAAAACGCGGCTGGTTTATg > 2:27407/1‑139 (MQ=255) tGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCCCTGGTTCGCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTa < 1:366815/139‑1 (MQ=255) tctcGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCCCTGGTTCGCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGACTATTTTCGGCTACTgg > 2:428022/1‑139 (MQ=255) tcGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCCCTGGTTCGCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCt > 1:386818/1‑139 (MQ=255) gaCGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCCCTGGTTCGCTTTGTGGCGaaaaaaa > 1:438443/1‑81 (MQ=255) gaCGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCCCTGGTTCGCTTTGTGGCGaaaaaaa < 2:438443/81‑1 (MQ=255) atgATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCCCTGGTTCGCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGtt > 1:87964/3‑139 (MQ=255) tGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCCCTGGTTCGCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTAt < 2:87964/139‑1 (MQ=255) ttGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCCCTGGTTCGCTTTGTGGCGAAAAAAACGCGGCTGGttt > 2:140263/1‑77 (MQ=255) ttGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCCCTGGTTCGCTTTGTGGCGAAAAAAACGCGGCTGGttt < 1:140263/77‑1 (MQ=255) ggTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCCCTGGTTCGCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGt > 2:201713/1‑139 (MQ=255) tACCGCTCTTTTTCCCTTTTCCCTGGTTCGCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACcgcg > 1:61928/1‑74 (MQ=255) tACCGCTCTTTTTCCCTTTTCCCTGGTTCGCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACcgcg < 2:61928/74‑1 (MQ=255) ttttCCCTGGTTCGCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGca > 1:268128/1‑139 (MQ=255) ttCCCTGGTTCGCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGcaca < 2:268128/139‑1 (MQ=255) | ATGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACA > NC_000913/4385801‑4386041 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |