| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 521,055 | T→C | L214L (TTA→CTA) | ybbP → | putative ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 521,055 | 0 | T | C | 100.0% | 47.6 / NA | 14 | L214L (TTA→CTA) | ybbP | putative ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (8/6); total (8/6) | |||||||||||
TGGCTCCGCGTCTGATGATGAATCTGGCGGATGTCGATAAAACCGGAGCCGTGCAGCCGGGGAGTCGGGTCACCTGGCGTTATAAATTCGGCGGCAACGAGAACCAGCTCGACGGCTATGAGAAATGGTTGTTACCTCAGCTTAAACCCGAACAACGCTGGTACGGTCTGGAACAGGACGAAGGCGCGCTGGGGCGATCGATGGAACGCTCGCAACAGTTC > NC_000913/520924‑521144 | tGGCTCCGCGTCTGATGATGAATCTGGCGGATGTCGATAAAACCGGAGCCGTGCAGCCGGGGAGTCGGGTCACCTGGCGTTATAAATTCGGCGGCAACGAGAACCAGCTCGACGGCTATGAGAAATGGTTGCTACCTCa > 1:65942/1‑139 (MQ=255) tCCGCGTCTGATGATGAATCTGGCGGATGTCGATAAAACCGGAGCCGTGCAGCCGGGGAGTCGGGTCACCTGGCGTTATAAATTCGGCGGCAACGAGAACCAGCTCGACGGCTATGAGAAATGGTTGCTACCTCAGCtt > 2:113058/1‑139 (MQ=255) aaaaCCGGAGCCGTGCAGCCGGGGAGTCGGGTCACCTGGCGTTATAAATTCGGCGGCAACGAGAACCAGCTCGACGGCTATGAGAAATGGTTGCTACCTCAGCTTAAACCCGAACAACGCTGGTACGGTCTGGAACAgg > 2:62161/1‑139 (MQ=255) ggggAGTCGGGTCACCTGGCGTTATAAATTCGGCGGCAACGAGAACCAGCTCGACGGCTATGAGAAATGGTTGCTACCTCAGCTTAAACCCGAACAACGCTGGTACGGTCTGGAACAGGACGAAGGCGCGCTGGGGcga < 2:65942/139‑1 (MQ=255) gggTCACCTGGCGTTATAAATTCGGCGGCAACGAGAACCAGCTCGACGGCTATGAGAAATGGTTGCTACCTCAGCTTAAACCCGAACAACGCTGGTACGGTCTGGAACAGGACGAAGGCGCGCTGGGGc > 1:151619/1‑129 (MQ=255) gggTCACCTGGCGTTATAAATTCGGCGGCAACGAGAACCAGCTCGACGGCTATGAGAAATGGTTGCTACCTCAGCTTAAACCCGAACAACGCTGGTACGGTCTGGAACAGGACGAAGGCGCGCTGGGGc < 2:151619/129‑1 (MQ=255) taAATTCGGCGGCAACGAGAACCAGCTCGACGGCTATGAGAAATGGTTGCTACCTCAGCTTGAACCCGAACAACGCTGGTACGGTCTGGAACAGGACGAAGGCGCGCTGGGGCGATCGATGGAACGCTCGCAACAGTTc > 2:118867/1‑139 (MQ=255) taAACTCGGCGGCAACGAGAACCAGCTCGACGGCTATGAGAAATGGTTGCTACCTCAGCTTAAACCCGAACAACGCTGGTACGGTCTGGAACAGGACGAAGGCGCGCTGGGGCGATCGATGGAACGCTCGCAACAGTTc < 2:48314/139‑1 (MQ=255) ggcggcAACGAGAACCAGCTCGACGGCTATGAGAAATGGTTGCTACCTCAGCTTAAACCCGAACAACGCTGGTa > 1:173390/1‑74 (MQ=255) ggcggcAACGAGAACCAGCTCGACGGCTATGAGAAATGGTTGCTACCTCAGCTTAAACCCGAACAACGCTGGTa < 2:173390/74‑1 (MQ=255) cggcAACGAGAACCAGCTCGACGGCTATGAGAAATGGTTGCTACCTCAGCTTAAACCCGAACAACGCTGGTa < 1:455142/72‑1 (MQ=255) cggcAACGAGAACCAGCTCGACGGCTATGAGAAATGGTTGCTACCTCAGCTTAAACCCGAACAACGCTGGTa > 2:455142/1‑72 (MQ=255) aCGAGAACCAGCTCGACGGCTATGAGAAATGGTTGCTACCTCAGCTTAAACCCGAACAACGCTGGTACGGTCTGGAACAGGACGAAGGCGCGCTGGGGCGATCGATGGAACGCt < 1:5014/114‑1 (MQ=255) aCGAGAACCAGCTCGACGGCTATGAGAAATGGTTGCTACCTCAGCTTAAACCCGAACAACGCTGGTACGGTCTGGAACAGGACGAAGGCGCGCTGGGGCGATCGATGGAACGCt > 2:5014/1‑114 (MQ=255) | TGGCTCCGCGTCTGATGATGAATCTGGCGGATGTCGATAAAACCGGAGCCGTGCAGCCGGGGAGTCGGGTCACCTGGCGTTATAAATTCGGCGGCAACGAGAACCAGCTCGACGGCTATGAGAAATGGTTGTTACCTCAGCTTAAACCCGAACAACGCTGGTACGGTCTGGAACAGGACGAAGGCGCGCTGGGGCGATCGATGGAACGCTCGCAACAGTTC > NC_000913/520924‑521144 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |