| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 190,778 | (G)5→6 | intergenic (+179/‑79) | rpsB → / → tsf | 30S ribosomal subunit protein S2/translation elongation factor EF‑Ts |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 190,773 | 1 | . | G | 100.0% | 119.1 / NA | 32 | intergenic (+174/‑84) | rpsB/tsf | 30S ribosomal subunit protein S2/translation elongation factor EF‑Ts |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (13/19); total (13/19) | |||||||||||
AGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTA‑GGGGGCCTGCATATGGCCCCCTTTTTCACTTTTATATCTGTGCGGTTTAATGCCGGGCAGATCACATCTCCGAGGATTTTAGAATGGCTGAAATTACCGCATCCCTGGTAAAAGAGCTGCGTGAGCGTAC > NC_000913/190637‑190903 | aGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTA‑gg < 2:62710/139‑1 (MQ=255) gcggcAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTA‑ggggggcc < 1:737561/139‑4 (MQ=255) cggcAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTA‑ggggggc > 2:623104/1‑135 (MQ=255) cggcAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTA‑ggggggc < 1:623104/137‑3 (MQ=255) gagaATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGGCCTGCATATGGcc < 1:333692/139‑1 (MQ=255) ccGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGGCCTGCATATGGCCCCCttttt < 1:442587/139‑1 (MQ=255) cGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTc < 1:456467/139‑1 (MQ=255) cGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTc < 1:637508/139‑1 (MQ=255) gTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTTATATCtgtg < 1:759769/139‑1 (MQ=255) aGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTTATATCTGTGCgg > 2:652008/1‑139 (MQ=255) gTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTTATATCTGTGCGGt > 2:229033/1‑139 (MQ=255) tGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTTATATCTGTGCGGtt < 2:108959/139‑1 (MQ=255) cGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTc > 2:362724/1‑115 (MQ=255) cGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTc < 1:362724/115‑1 (MQ=255) gggATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTTATATCTGTGCGGTTTAATg < 1:652008/139‑1 (MQ=255) gATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTTATATCTGTGCGGTTTAATGcc < 1:48973/139‑1 (MQ=255) gcgagcgaAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTTATATCTGTGCGGTTTAATGCCGGGCa < 2:528519/139‑1 (MQ=255) cgagcgaAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTTATATCTGTGCGGTTTAATGCCGGGCAg > 1:142494/1‑139 (MQ=255) cgaAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTGTAGAATAGGTAGTACACGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTTatat < 1:723416/112‑1 (MQ=255) cgaAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTTatat > 2:87996/1‑112 (MQ=255) cgaAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTTatat < 1:87996/112‑1 (MQ=255) cgaAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTTatat > 2:723416/1‑112 (MQ=255) cGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGATTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTTATATCTGTGCGGTTTAATGCCGGGCAGATCACATCTCCGa > 1:381482/1‑139 (MQ=255) ggcgCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTTATATCTGTGCGGTTTAATGCCGGGCAGATCACATCTCCGAGGATTTTAg < 2:748892/139‑1 (MQ=255) gggAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTTATATCTGTGCGGtt < 2:46786/87‑1 (MQ=255) gggAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTTATATCTGTGCGGtt > 1:46786/1‑87 (MQ=255) ggTAGTACACGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTc > 2:371957/1‑47 (MQ=255) ggTAGTACACGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTc < 1:371957/47‑1 (MQ=255) gtagtaCACGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTGATATCTGTGCGGTTTAATGCCGGGCAGATCACATCTCCGAGGATTTTAGAATGGCTGAAATTACCGCATCCCTGGTAAAAGAGCTGc > 2:482682/1‑139 (MQ=255) acacGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTTATATCTGTGCGGTTTAATGCCGGGCAGATCACATCTCCGAGGATTTTAGa < 2:374127/97‑1 (MQ=255) acacGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTTATATCTGTGCGGTTTAATGCCGGGCAGATCACATCTCCGAGGATTTTAGa > 1:374127/1‑97 (MQ=255) cacGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTTATATCTGTGCGGTTTAATGCCGGGCAGATCACATCTCCGAGGATTTTAGAATGGCTGaaa > 1:175024/1‑106 (MQ=255) cacGTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTTATATCTGTGCGGTTTAATGCCGGGCAGATCACATCTCCGAGGATTTTAGAATGGCTGaaa < 2:175024/106‑1 (MQ=255) gTTTGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTTATATCTGTGCGGTTTAATGCCGGGCAGATCACATCTCCGAGGATTTTAGAATGGCTGAAATTACCGCATCCCTGGTAAAAGAGCTGCGTGAGCGTa < 1:229033/139‑1 (MQ=255) tttGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTTATATCTGTGCGGTTTAATGCCGGGCAGATCACATCTCCGAGGATTTTAGAATGGCTGAAATTACCGCATCCCTGGTAAAAGAGCTGCGTGAGCGTaa > 1:116823/1‑138 (MQ=255) tttGGTTAGGGGGGCCTGCATATGGCCCCCTTTTTCACTTTTATATCTGTGCGGTTTAATGCCGGGCAGATCACATCTCCGAGGATTTTAGAATGGCTGAAATTACCGCATCCCTGGTAAAAGAGCTGCGTGAGCGTAc < 1:482682/139‑1 (MQ=255) | AGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTA‑GGGGGCCTGCATATGGCCCCCTTTTTCACTTTTATATCTGTGCGGTTTAATGCCGGGCAGATCACATCTCCGAGGATTTTAGAATGGCTGAAATTACCGCATCCCTGGTAAAAGAGCTGCGTGAGCGTAC > NC_000913/190637‑190903 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |