| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,118,516 | G→A | R177R (CGC→CGT) | yceJ ← | putative cytochrome b561 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,118,516 | 0 | G | A | 100.0% | 100.0 / NA | 29 | R177R (CGC→CGT) | yceJ | putative cytochrome b561 |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (13/16); total (13/16) | |||||||||||
CCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCATTTTTTATACTCCATAGTCAGATGACGACTTTCCCAGCATGCGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATAAATCCGTGCATAACGGACAGTACTACGACGCTCCACGCGAGCCAAAAATGCAGGGCACCGGCAAAGTCTGCCTGTGCGC > NC_000913/1118385‑1118643 | ccTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCATTTTTTATACTCCATAGTCAGATGACGACTTTCCCAGCATACGCTTCa < 2:281316/139‑1 (MQ=255) tCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCATTTTTTATACTCCATAGTCAGATGACGACTTTCCCAGCATACGCTTCAGAGTgtcgt > 1:191671/1‑139 (MQ=255) aTCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCATTTTTTATACTCCATAGTCAGATGACGACTTTCCCAGCATACGCTTCAGAGTGTCGTCTTTATCGATg < 2:693109/139‑1 (MQ=255) gCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCATTTTTTATACTCCATAGTCAGATGACGACTTTCCCAGCATACGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATaa > 2:477446/1‑139 (MQ=255) gaACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCATTTTTTATACTCCATAGTCAGATGACGACTTTCCCAGCATACGCTTCAGAGTgtc < 2:96765/99‑1 (MQ=255) gaACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCATTTTTTATACTCCATAGTCAGATGACGACTTTCCCAGCATACGCTTCAGAGTgtc > 1:96765/1‑99 (MQ=255) cAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCATTTTTTATACTCCATAGTCAGATGACGACTTTCCCAGCATACGGTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATAAATCCGTGCATa < 2:489566/139‑1 (MQ=255) aCGCGAAGGTTAAACCAAGCAGGCTTTTTTTCATTTTTTATACTCCATAGTCAGATGACGACTTTCCCAGCATACGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATAAATCCGTGCATAACGGa < 2:519155/139‑1 (MQ=255) aCGCGAAGGTTAAACCAAGCAGGCTTTTTTTCATTTTTTATACTCCATAGTCAGATGACGACTTTCCCAGCATACGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATAAATCCGTGCATAACGGa < 2:191671/139‑1 (MQ=255) gCAGGCTTTTTTTCATTTTTTATACTCCATAGTCAGATGACGACTTTCCCAGCATACGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATAAATCCGTGCATAACg < 1:743254/119‑1 (MQ=255) gCAGGCTTTTTTTCATTTTTTATACTCCATAGTCAGATGACGACTTTCCCAGCATACGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATAAATCCGTGCATAACg > 2:743254/1‑119 (MQ=255) gCAGGCTTTTTTTCATTTTTTATACTCCATAGTCAGATGACGACTTTCCCAGCATACGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATAAATCCGTGCATAACGGa > 1:359129/1‑121 (MQ=255) gCAGGCTTTTTTTCATTTTTTATACTCCATAGTCAGATGACGACTTTCCCAGCATACGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATAAATCCGTGCATAACGGa < 2:359129/121‑1 (MQ=255) gCAGGCTTTTTTTCATTTTTTATACTCCATAGTCAGATGACGACTTTCCCAGCATACGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATAAATCCGTGCATAACGGACAGTACTACGACGCTCCa > 2:457095/1‑139 (MQ=255) tataCTCCATAGTCAGATGACGACTTTCCCAGCATACGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATAAATCCGTGCATAACGGACAGTACTACGACGCTCCACGCGAGCCAAAAATGCAggg < 1:457095/139‑1 (MQ=255) tAGTCAGATGACGACTTTCCCAGCATACGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATAAATCCGTGCATAACGGa > 2:82639/1‑92 (MQ=255) tAGTCAGATGACGACTTTCCCAGCATACGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATAAATCCGTGCATAACGGa < 1:82639/92‑1 (MQ=255) tCAGATGACGACTTTCCCAGCATACGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATAAATCCGTGCATAACGGa < 1:519598/89‑1 (MQ=255) tCAGATGACGACTTTCCCAGCATACGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATAAATCCGTGCATAACGGa > 2:519598/1‑89 (MQ=255) aGATGACGACTTTCCCAGCATACGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATAAATCCGTGCATAACGGACAGTACTACGACGCTCCACGCGAGCCAAAAATGCAGGGCa < 1:571154/127‑1 (MQ=255) aGATGACGACTTTCCCAGCATACGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATAAATCCGTGCATAACGGACAGTACTACGACGCTCCACGCGAGCCAAAAATGCAGGGCa > 2:571154/1‑127 (MQ=255) gATGACGACTTTCCCAGCATACGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATAAATCCGTGCATAACGGACAGTACTACGACGCTCCACGCGAGCCAAAAATGCAGGGCACCGGCAAAGTCTg > 1:781474/1‑139 (MQ=255) tGACGACTTTCCCAGCATACGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTc < 1:722222/58‑1 (MQ=255) tGACGACTTTCCCAGCATACGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTc > 2:722222/1‑58 (MQ=255) tGACGACTTTCCCAGCATACGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATAAATCCGTGCATAACGGa > 1:123390/1‑84 (MQ=255) tGACGACTTTCCCAGCATACGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATAAATCCGTGCATAACGGa < 2:123390/84‑1 (MQ=255) tttCCCAGCATACGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATAAATCCGTGCATAACGGACAGTACTACGACGCTCCACGCCAGCCAAAAATGCAGGGCACCGGCAAAGTCTGCCTGTgcgc < 1:477446/139‑1 (MQ=255) cATACGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATAAATCCGTGCATAACg < 2:60522/67‑1 (MQ=255) cATACGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATAAATCCGTGCATAACg > 1:60522/1‑67 (MQ=255) | CCTTCTTTGTCAATTTTGTAATCGGCGGCAACCGCTGAACCGGCAGAGAACATCAGGGACGCGAAGGTTAAACCAAGCAGGCTTTTTTTCATTTTTTATACTCCATAGTCAGATGACGACTTTCCCAGCATGCGCTTCAGAGTGTCGTCTTTATCGATGAAATGATGCTTCAGGGCCATAAATCCGTGCATAACGGACAGTACTACGACGCTCCACGCGAGCCAAAAATGCAGGGCACCGGCAAAGTCTGCCTGTGCGC > NC_000913/1118385‑1118643 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |