| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,216,464 | G→A | R10C (CGC→TGC) | yqjH ← | putative siderophore interacting protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,216,464 | 0 | G | A | 100.0% | 95.7 / NA | 28 | R10C (CGC→TGC) | yqjH | putative siderophore interacting protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (13/15); total (13/15) | |||||||||||
ACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCTTCGTGATGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCT > NC_000913/3216348‑3216597 | aCGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCACTGCGGGTAGCGGGGGGTGTTa < 2:667193/139‑1 (MQ=255) gTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGcc < 1:277873/139‑1 (MQ=255) tCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCt > 1:684230/1‑139 (MQ=255) tCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCt > 1:162793/1‑139 (MQ=255) cgcCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCTTCGTg < 1:56715/139‑1 (MQ=255) cgccgcCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCACTGCGGGTAGCg > 1:399595/1‑103 (MQ=255) cgccgcCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCACTGCGGGTAGCg < 2:399595/103‑1 (MQ=255) cgccgAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCTTCGTGATGGTAAt < 2:36615/139‑1 (MQ=255) gACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCTTCGTGATGGTaa > 2:509115/1‑131 (MQ=255) gACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCTTCGTGATGGTaa < 1:509115/131‑1 (MQ=255) tGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCTTCGTGATGGTaa < 2:475546/121‑1 (MQ=255) tGAAAACCGGCGCTCATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCACAGCGGGTAGCGGGGGGTGTTATTCATTATTATCGCCTTCGTGATGGTaa > 1:475546/1‑121 (MQ=255) cGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCTTCGTTATGGTAATCAGATATATCTAAATAAAACTCGc < 2:466027/139‑1 (MQ=255) cGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCTTCGTGATGGTAATCAGATATATCTAAATAAAACTCGc > 1:453145/1‑139 (MQ=255) agtcagtTCACGGAAGCGCAGATCATTGCGAACGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCTTCGTGATGGTAAt < 1:169078/87‑1 (MQ=255) agtcagtTCACGGAAGCGCAGATCATTGCGAACGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCTTCGTGATGGTAAt > 2:169078/1‑87 (MQ=255) agtcagtTCACGGAAGCGCAGATCATTGCGAACGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCTTCGTGATGGTAATCAGATATATCTAAATAAAACTCGc < 2:131355/111‑1 (MQ=255) agtcagtTCACGGAAGCGCAGATCATTGCGAACGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCTTCGTGATGGTAATCAGATATATCTAAATAAAACTCGc > 1:131355/1‑111 (MQ=255) cgcAGATCATTGCGAACGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCTTCGTGa < 1:658879/64‑1 (MQ=255) cgcAGATCATTGCGAACGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCTTCGTGa > 2:658879/1‑64 (MQ=255) cgcAGATCATTGCGAACGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCTTCGTGATGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGAt < 2:261159/134‑1 (MQ=255) cgcAGATCATTGCGAACGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCTTCGTGATGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGAt > 1:261159/1‑134 (MQ=255) cgcAGATCATTGCGAACGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCTTCGTGATGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTa > 1:534382/1‑139 (MQ=255) cgcAGATCATTGCGAACGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCTTCGTGATGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTa > 2:495805/1‑139 (MQ=255) cgcAGATCATTGCGAACGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCTTCGTGATGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTa > 2:498957/1‑139 (MQ=255) cgcAGATCATTGCGAACGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCTTCGTGATGGTAATCACATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTa < 2:534382/139‑1 (MQ=255) ttGCGAACGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCTTCGTGATGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAGCTGata < 1:498957/139‑1 (MQ=255) aaCGCACTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCTTCGTGATGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCt < 1:649924/139‑1 (MQ=255) | ACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTAGCGGGGGGTGTTATTCATTGTTATCGCCTTCGTGATGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCT > NC_000913/3216348‑3216597 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |