| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,136,860 | A→G | T251T (ACA→ACG) | yijE → | EamA‑like transporter family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,136,860 | 0 | A | G | 100.0% | 91.3 / NA | 26 | T251T (ACA→ACG) | yijE | EamA‑like transporter family protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (13/13); total (13/13) | |||||||||||
GTGTTCTGGGCGCTGGCCTACAGTGCGATTCTGGCGACGGCACTGGCGTGGAGCTTATGGTTGTTTGTATTGAAAAACTTGCCTGCCAGTATTGCCAGCTTAAGCACACTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATCCGGGGGCCGTTGAAGGTAGCGGTATTGTGCTGATTGTGCTGGCACTGGCGCTGGTGAGCCGTAAGAAAAAAGAAGCCGTC > NC_000913/4136753‑4136995 | gtgtTCTGGGCGCTGGCCTACAGTGCGATTCTGGCGACGGCACTGGCGTGGAGCTTATGGTTGTTTGTATTGAAAAACTTGCCTGCCAGTATTGCCAGCTTAAGCACGCt > 2:631751/1‑110 (MQ=255)gtgtTCTGGGCGCTGGCCTACAGTGCGATTCTGGCGACGGCACTGGCGTGGAGCTTATGGTTGTTTGTATTGAAAAACTTGCCTGCCAGTATTGCCAGCTTAAGCACGCt < 1:631751/110‑1 (MQ=255) gcgcTGGCCTACAGTGCGATTCTGGCGACGGCACTGGCGTGGAGCTTATGGTTGTTTGTATTGAAAAACTTGCCTGCCAGTATTGCCAGCTTAAGCACGCTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGgc > 1:317210/1‑139 (MQ=255) cGATTCTGGCGACGGCACTGGCGTGGAGCTTATGGTTGTTTGTATTGAAAAACTTGCCTGCCAGTATTGCCAGCTTAAGCACGCTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATcc > 2:79960/1‑139 (MQ=255) cGATTCTGGCGACGGCACTGGCGTGGAGCTTATGGTTGTTTGTATTGAAAAACTTGCCTGCCAGTATTGCCAGCTTAAGCACGCTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATcc > 2:729319/1‑139 (MQ=255) cGATTCTGGCGACGGCACTGGCGTGGAGCTTATGGTTGTTTGTATTGAAAAACTTGCCTGCCAGTATTGCCAGCTTAAGCACGCTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATcc > 1:733602/1‑139 (MQ=255) ggCACTGGCGTGGAGCTTATGGTTGTTTGTATTGAAAAACTTGCCTGCCAGTATTGCCAGCTTAAGCACGCTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATCCGGGGGCCGTTGaa > 1:201636/1‑139 (MQ=255) tGGCGTGGAGCTTATGGTTGTTTGTATTGAAAAACTTGCCTGCCAGTATTGCCAGCTTAAGCACGCTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATCCGGGGGCCGTTGAAGGTAg < 2:317210/139‑1 (MQ=255) gCGTGGAGCTTATGGTTGTTTGTATTGAAAAACTTGCCTGCCAGTATTGCCAGCTTAAGCACGCTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATCCGGGGGCCGTTGAAGGTAGCg < 2:607084/139‑1 (MQ=255) tGGAGCTTATGGTTGTTTGTATTGAAAAACTTGCCTGCCAGTATTGCCAGCTTAAGCACGCTTGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATCCGGGGGCCGTTGAAGGTAGCGGTa < 1:680769/139‑1 (MQ=255) tATGGTTGTTTGTATTGAAAAACTTGCCTGCCAGTATTGCCAGCTTAAGCACGCTGGCCGtt > 2:678850/1‑62 (MQ=255) tATGGTTGTTTGTATTGAAAAACTTGCCTGCCAGTATTGCCAGCTTAAGCACGCTGGCCGtt < 1:678850/62‑1 (MQ=255) ggTTGTTTGTATTGAAAAACTTGCCTGCCAGTATTGCCAGCTTAAGCACGCTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATCCGGGGGCCGTTGAAGGTAGCGGTattgtgctgat < 2:201636/139‑1 (MQ=255) tttgtATTGAAAAACTTGCCTGCCAGTATTGCCAGCTTAAGCACGCTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATCCggggg < 1:763715/106‑1 (MQ=255) tttgtATTGAAAAACTTGCCTGCCAGTATTGCCAGCTTAAGCACGCTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATCCggggg > 2:763715/1‑106 (MQ=255) ttGAAAAACTTGCCTGCCAGTATTGCCAGCTTAAGCACGCTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATCCGGGGGCCGTTGAAGGTAGCGGTATTGTGCTGATTGTGCTGGCAc < 1:729319/139‑1 (MQ=255) aaaCTTGCCTGCCAGTATTGCCAGCTTAAGCACGCTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATCCggggg < 1:256601/95‑1 (MQ=255) aaaCTTGCCTGCCAGTATTGCCAGCTTAAGCACGCTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATCCggggg > 2:256601/1‑95 (MQ=255) ccAGCTTAAGCACGCTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATCCGGGGGCCGTTGAAGGTAGCGGTATTGTGCTGATTGTGCTGGCACTGGCGCTGGTGAGCCGTAAGaaaaa > 1:522709/1‑139 (MQ=255) cTTAAGCACGCTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATCCGGGGGCCGTTGAAGGTAg > 2:402124/1‑84 (MQ=255) cTTAAGCACGCTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATCCGGGGGCCGTTGAAGGTAg < 1:402124/84‑1 (MQ=255) cTTAAGCACGCTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATCCGGGGGCCGTTGAAGGTAGCGGTATTGTGCTGATTGTGCTGGCACTGGCGCTGGTGAGCCGTAAGAAAAaagaa < 2:201891/139‑1 (MQ=255) ttAAGCACGCTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATCCGGGGGCCGTTGAAGGTAGCGGTATTGTGCTGATTGTGCTGGCACTgg < 1:715343/112‑1 (MQ=255) ttAAGCACGCTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATCCGGGGGCCGTTGAAGGTAGCGGTATTGTGCTGATTGTGCTGGCACTgg > 2:715343/1‑112 (MQ=255) ttAAGCACGCTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATCCGGGGGCCGTTGAAGGTAGCGGTATTGTGCTGATTGTGCTGGCACTGGCGCTGGTGAGCCGTAAGAAAAaaga > 2:588374/1‑137 (MQ=255) ttAAGCACGCTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATCCGGGGGCCGTTGAAGGTAGCGGTATTGTGCTGATTGTGCTGGCACTGGCGCTGGTGAGCCGTAAGAAAAaaga < 1:588374/137‑1 (MQ=255) gCACGCTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGACGAGAATCCGGGGGCCGTTGAAGGTAGCGGTATTGTGCTGATTGTGCTGGCACTGGCGCTGGTGAGCCGTAAGAAAAAAGAAGCCGt < 2:522709/139‑1 (MQ=255) cacgCTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATCCGGGGGCCGTTGAAGGTAGCGGTATTGTGCTGATTGTGCTGGCACTGGCGCTGGTGAGCCGTAAGAAAAAAGAAGCCGTc < 2:733602/139‑1 (MQ=255) | GTGTTCTGGGCGCTGGCCTACAGTGCGATTCTGGCGACGGCACTGGCGTGGAGCTTATGGTTGTTTGTATTGAAAAACTTGCCTGCCAGTATTGCCAGCTTAAGCACACTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATCCGGGGGCCGTTGAAGGTAGCGGTATTGTGCTGATTGTGCTGGCACTGGCGCTGGTGAGCCGTAAGAAAAAAGAAGCCGTC > NC_000913/4136753‑4136995 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |