| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,367,989 | (C)5→6 | coding (919/969 nt) | arnC → | undecaprenyl phosphate‑L‑Ara4FN transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,367,984 | 1 | . | C | 100.0% | 122.2 / NA | 35 | R305P (CGC→CCC) | arnC | undecaprenyl phosphate‑L‑Ara4FN transferase |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (20/15); total (20/15) | |||||||||||
ACCTTCGGACCACAATGGGCGGCAGAAGGCGTCTTTATGCTATTTGCCGTGCTGTTTACTTTTATTGGCGCTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCG‑CCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGAAAATGAATAATGAAAACCGTCGTTTTTGCCTACCACGATATGGGATGCCTCGGTATTGAAGCCCTGCTGGCTGCCGGTT > NC_000913/2367848‑2368108 | aCCTTCGGACCACAATGGGCGGCAGAAGGCGTCTTTATGCTATTTGCCGTGCTGTTTACTTTTATTGGCGCTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGcgcccg‑cc > 2:723973/1‑139 (MQ=255) ttCGGACCACAATGGGCGGCAGAAGGCGTCTTTATCCTATTTGCCGTGCTGTTTACTTTTATTGGCGCTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCG‑ccccc < 1:487482/139‑1 (MQ=255) cGGACCACAATGGGCGGCAGAAGGCGTCTTTATGCTATTTGCCGTGCTGTTTACTTTTATTGGCGCTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCG‑ccccccg < 1:723973/139‑3 (MQ=255) cGGACCACAATGGGCGGCAGAAGGCGTCTTTATGCTATTTGCCGTGCTGTTTACTTTTATTGGCGCTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCG‑ccccccg > 1:460881/1‑137 (MQ=255) cAGAAGGCGTCTTTATGCTATTTGCCGTGCTGTTTACTTTTATTGGCGCTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAg > 1:59859/1‑139 (MQ=255) aaGGCGTCTTTATGCTATTTGCCGTGCTGTTTACTTTTATTGGCGCTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTa < 2:59859/139‑1 (MQ=255) tCTTTATGCTATTTGCCGTGCTGTTTACTTTTATTGGCGCTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGtc > 2:645660/1‑139 (MQ=255) gCTATTTGCCGTGCTGTTTACTTTTATTGGCGCTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAg < 2:460881/139‑1 (MQ=255) tttGCCGTGCTGTTTACTTTTATTGGCGCTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAg > 1:229632/1‑139 (MQ=255) tttGCCGTGCTGTTTACTTTTATTGGCGCTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAg > 2:94141/1‑139 (MQ=255) ttGCCGTGCTGTTTACTTTTATTGGCGCTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAgg > 2:725961/1‑139 (MQ=255) gCCGTGCTGTTTACTTTTATTGGCGCTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGaa > 2:414535/1‑139 (MQ=255) ccGTCCTGTTTACTTTTATGGGCGCTAAGTTTTTCGGCATGGTATTACACGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGaaa < 2:606876/139‑1 (MQ=255) gTGCTGTTTACTTTTATTGGCGCTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGAAAAt < 2:298906/139‑1 (MQ=255) ttGGCGCTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCG‑ccccccg > 1:487725/1‑78 (MQ=255) ctGGCGCTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCG‑ccccccg < 2:487725/79‑3 (MQ=255) gcgcTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGAAAATGAATAATGAAAACcgtcgt > 1:38406/1‑139 (MQ=255) cgcTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCAGTCCATCCAGCAAGGAAAATGAATAATGAAAACCGGCGtt > 2:84554/1‑139 (MQ=255) gcTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGAAAATGAATAATGAAAACCGTCGttt > 1:719595/1‑139 (MQ=255) gcTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCG‑ccccccg < 2:317862/75‑3 (MQ=255) gcTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCG‑ccccccg < 1:112829/75‑3 (MQ=255) gcTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCG‑ccccccg > 2:112829/1‑73 (MQ=255) gcTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCG‑ccccccg > 1:317862/1‑73 (MQ=255) tttATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGAAAATGAATAATGAAAACCGTCGTTTTTGCCt < 1:645660/139‑1 (MQ=255) ggATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGAAAATGAATAATGAAAACCGTCGTTTTTGCCTACCACGATATgg > 1:189862/1‑139 (MQ=255) aTTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGAAAATGAATAATGAAAACCGTCGTTTTTGCCTACCACGATATGGGa < 2:229632/139‑1 (MQ=255) tCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGAAAATGAATAATGAAAACCGTCGTTTTTGCCTACCACGATATGGGATGCCt < 1:414535/139‑1 (MQ=255) tGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGtt > 1:515585/1‑56 (MQ=255) tGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGtt < 2:515585/56‑1 (MQ=255) tGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGaaa < 2:204589/87‑1 (MQ=255) tGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGaaa > 1:204589/1‑87 (MQ=255) tGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGAAAATGAATAATGAAAACCGTCGTTTTTGCCTACCACGATATGGGATGCCTCGGt > 1:642360/1‑139 (MQ=255) ggCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTc > 2:389592/1‑47 (MQ=255) ggCAGGATCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTc < 1:389592/47‑1 (MQ=255) aTCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTCTCCGTCCATCCAGCAAGGaaa > 2:88471/1‑71 (MQ=255) aTCTACACCGATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGaaa < 1:88471/71‑1 (MQ=255) gATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGAAAATGAATAATGAAAACCGTCGTTTTTGCCTAc > 1:185641/1‑93 (MQ=255) gATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGAAAATGAATAATGAAAACCGTCGTTTTTGCCTAc < 2:185641/93‑1 (MQ=255) gATGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGAAAATGAATAATGAAAACCGTCGTTTTTGCCTACCACGATATGGGATGCCTCGGTATTGAAGCCCTGCTGGCTGCCGGtt > 2:9693/1‑139 (MQ=255) aTGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGCAAATGAATAATGAAAACCGTCGTTTTTGCCTACCACGATATGGGATGCCt > 2:598176/1‑109 (MQ=255) aTGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGAAAATGAATAATGAAAACCTTCGTTTTTGCCTACCACGATATGGGATGCCt < 1:598176/109‑1 (MQ=255) aTGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGAAAATGAATAATGAAAACCGTCGTTTTTGCCTAc < 2:622611/92‑1 (MQ=255) aTGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGAAAATGAATAATGAAAACCGTCGTTTTTGCCTAc > 1:622611/1‑92 (MQ=255) tGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGAAAATGAATAATGAAAACCGTCGttt > 2:607173/1‑83 (MQ=255) tGTCCGCGCCCGCCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGAAAATGAATAATGAAAACCGTCGttt < 1:607173/83‑1 (MQ=255) | ACCTTCGGACCACAATGGGCGGCAGAAGGCGTCTTTATGCTATTTGCCGTGCTGTTTACTTTTATTGGCGCTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCG‑CCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGAAAATGAATAATGAAAACCGTCGTTTTTGCCTACCACGATATGGGATGCCTCGGTATTGAAGCCCTGCTGGCTGCCGGTT > NC_000913/2367848‑2368108 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |