Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,311,756 A→G S332P (TCC→CCC)  ompC ← outer membrane porin protein C

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,311,7560AG100.0% 133.6 / NA 36S332P (TCC→CCC) ompCouter membrane porin protein C
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (17/19);  total (17/19)

CGATATCAATCGAGATTAGAACTGGTAAACCAGACCCAGAGCTACGATGTTATCAGTGTTGATGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGACATGTTTTTGTTGAAGTAGTAGGTAGCACCAACATCAACATATTTCAGGATATCTTCGTCGTCGTAGCCACGACCCAGGTTTTTACCTTTAGACTGCAGGTAAGCCAGGGACGGACGCAGACCGAAGTCGAAC  >  NC_000913/2311631‑2311889
                                                                                                                             |                                                                                                                                     
cGATATCAATCGAGATTAGAACTGGTAAACCAGACCCAGAGCTACGATGTTATCAGTGTTGATGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTttgttg                                                                                                                          <  1:91934/139‑1 (MQ=255)
cGATATCAATCGAGATTAGAACTGGTAAACCAGACCCAGAGCTACGATGTTATCAGTGTTGATGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTttgttg                                                                                                                          >  1:65016/1‑139 (MQ=255)
  atatCAATCGAGATTAGAACTGGTAAACCAGACCCAGAGCTACGATGTTATCAGTGTTGATGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTTTGTTGaa                                                                                                                        >  2:43450/1‑139 (MQ=255)
     tCAATCGAGATTAGAACTGGTAAACCAGACCCAGAGCTACGATGTTATCAGTGTTGATGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTTTGTTGAagta                                                                                                                     <  1:789219/139‑1 (MQ=255)
       aaTCGAGATTAGAACTGGTAAACCAGACCCAGAGCTACGATGTTATCAGTGTTGATGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTTTGTTGAagtagt                                                                                                                   <  2:65016/139‑1 (MQ=255)
        aTCGAGATTAGAACTGGTAAACCAGACCCAGAGCTACGATGTTATCAGTGTTGATGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTTTGTTGAAgtagta                                                                                                                  >  2:587297/1‑139 (MQ=255)
        aTCGAGATTAGAACTGGTAAACCAGACCCAGAGCTACGATGTTATCAGTGTTGATGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTTTGTTGAAgtagta                                                                                                                  >  1:347855/1‑139 (MQ=255)
               ttAGAACTGGTAAACCAGACCCAGAGCTACGATGTTATCAGTGTTGATGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTTTGTTGAAGTAGTAGGTAGCa                                                                                                           <  1:587297/139‑1 (MQ=255)
                       ggTAAACCAGACCCAGAGCTACGATGTTATCAGTGTTGATGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTTTGTTGAAGTAGTAGGTAGCACcaacatc                                                                                                   >  2:245692/1‑139 (MQ=255)
                       ggTAAACCAGACCCAGAGCTACGATGTTATCAGTGTTGATGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGCGCATGTTTTTGTTGAAGTAGTAGGTAGCACcaacatc                                                                                                   <  1:538684/139‑1 (MQ=255)
                                 aCCCAGAGCTACGATGTTATCAGTGTTGATGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTTTGTTGAAGTAGTAGGTAGCACCAACATCAACATATTTc                                                                                         >  2:515882/1‑139 (MQ=255)
                                  cccAGAGCTACGATGTTATCAGTGTTGATGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTttgttg                                                                                                                          >  2:728005/1‑105 (MQ=255)
                                  cccAGAGCTACGATGTTATCAGTGTTGATGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTttgttg                                                                                                                          <  1:728005/105‑1 (MQ=255)
                                    cAGAGCTACGATGTTATCAGTGTTGATGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTTTGTTGAAGTAGTAGGTAGCACCAACATCAACATATTTCAgg                                                                                      <  1:657512/139‑1 (MQ=255)
                                           aCGATGTTATCAGTGTTGATGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTttgttg                                                                                                                          <  1:70138/96‑1 (MQ=255)
                                           aCGATGTTATCAGTGTTGATGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTttgttg                                                                                                                          >  2:70138/1‑96 (MQ=255)
                                           aCGATGTTATCAGTGTTGATGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTTTGTTGAAGTAGTAGGTAGCACCAACATCAACATATTTCAGGATATCtt                                                                               >  2:764240/1‑139 (MQ=255)
                                              aTGTTATCACTGTTGATGCCAGCGTCACGAGTGATCTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTTTGTTGAAGTAGTAGGTAGCACCAACATCAACATATTTCAGGATATCTtcgt                                                                            <  1:515882/139‑1 (MQ=255)
                                                 ttATCAGTGTTGATGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTttgt                                                                                                                            <  2:703666/88‑1 (MQ=255)
                                                 ttATCAGTGTTGATGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTttgt                                                                                                                            >  1:703666/1‑88 (MQ=255)
                                                       gtgtTGATGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTTTGTTGAAGTAGTAGGTAGCACCAACATCAACATATTTCAGGATATCTTCGTCGTCGTAGc                                                                   >  1:693545/1‑139 (MQ=255)
                                                          ttGATGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTTTGTTGAAGTAGTAGGTAGCACCAACATCAACATATTTCAGGATATCTTCGTCGTCGTAGCCAc                                                                >  2:297478/1‑139 (MQ=255)
                                                             aTGCCAGCGTCACGAGTGAACTGGTTGTAGTCCAACAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTTTGTTGAAGTAGTAGGTAGCACCAACATCAACATATTTCAGGATATCTTCGTCGTCGTAGCCACGAc                                                             >  2:522282/1‑139 (MQ=255)
                                                              tGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTTTGTTGAAGTAGTAGGTAGCACCAACATCAACATATTTCAGGATATCTTCGTCGTCGTAGCCACGAcc                                                            <  1:750082/139‑1 (MQ=255)
                                                                      tCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTTTGTTGAAGTAGTAGGTAGCACCAACATCAACATATTTCAGGATATCTTCGTCGTCGTAGCCACGACCCAGGtttt                                                    <  2:347855/139‑1 (MQ=255)
                                                                       cACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTTTGTTGAAGTAGTAGGTAGCACCAACATCAACATATTTCAGGATATCTTCGTCGTCGTAGCCACGACCCAGGttttt                                                   >  2:251262/1‑139 (MQ=255)
                                                                            gTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTTTGTTGAAGTAGTAGGTAGCACCAACATCAACATATTTCAGGATATCTTCGTCGTCGTAGCCACGACCCAGGTTTTTACCtt                                              <  2:17415/139‑1 (MQ=255)
                                                                              gAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTTTGTTGAAGTAGTAGGTAGCACCAACATCAACATATTTCAGGATATCTTCGTCGTCGTAGCCACGACCCAGGTTTTTACCTTTa                                            <  1:43450/139‑1 (MQ=255)
                                                                                      tGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTttgt                                                                                                                            >  1:566351/1‑51 (MQ=255)
                                                                                      tGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTttgt                                                                                                                            <  2:566351/51‑1 (MQ=255)
                                                                                        tcgtcCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTTTGTTGAAGTAGTAGGTAGCACCAACATCAACATATTTCAGGATATCTTCGTCGTCGTAGCCACGACCCAGGTTTTTACCTTTAGACTGCAGGt                                  <  1:245692/139‑1 (MQ=255)
                                                                                              agcagGTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTTTGTTGAAGTAGTAGGTAGCACCAACATCAACATATTTCAGGATATCTTCGTCGTCGTAGCCACGACCCAGGTTTTTACCTTTAGACTGCAGGTAAGCCa                            >  2:529861/1‑139 (MQ=255)
                                                                                                  ggTTGATTTTGTAGTCAACGTAGGTGGGCATGTTTTTGTTGAAGTAGTAGGTAGCACCAACATCAACATATTTCAGGATATCTTCGTCGTCGTAGCCACGACCCAGGTTTTTACCTTTAGACTGCAGGTAAGCCAGgga                        >  1:528230/1‑139 (MQ=255)
                                                                                                                   aCGTAGGTGGGCATGTTTTTGTTGAAGTAGTAGGTAGCACCAACATCAACATATTTCAGGATATCTTCGTCGTCGTAGCCACGACCCAGGTTTTTACCTTTAGACTGCAGGTAAGCCAGGGACGGACGCAGACCGAAGt       <  1:81168/139‑1 (MQ=255)
                                                                                                                        ggTGGGCATGTTTTTGTTGAAGTAGTAGGTAGCACCAACATCAACATATTTCAGGATATCTTCGTCGTCGTAGCCACGACCCAGGTTTTTACCTTTAGACTGCAGGTAAGCCAGGGACGGACGCAGACCGAAGTCGAAc  <  1:297478/139‑1 (MQ=255)
                                                                                                                        ggTGGGCATGTCTTTGTTGAAGTAGTAGGTAGCACCAACATCAACATATTTCAGGATATCTTCGTCGTCGTAGCCACGACCCAGGTTTTTACCTTTAGACTGCAGGTAAGCCAGGGACGGACGCAGACCGAAGTCGAAc  <  1:522282/139‑1 (MQ=255)
                                                                                                                             |                                                                                                                                     
CGATATCAATCGAGATTAGAACTGGTAAACCAGACCCAGAGCTACGATGTTATCAGTGTTGATGCCAGCGTCACGAGTGAACTGGTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGACATGTTTTTGTTGAAGTAGTAGGTAGCACCAACATCAACATATTTCAGGATATCTTCGTCGTCGTAGCCACGACCCAGGTTTTTACCTTTAGACTGCAGGTAAGCCAGGGACGGACGCAGACCGAAGTCGAAC  >  NC_000913/2311631‑2311889

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑