| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,471,819 | A→G | pseudogene (304/579 nt) | yfdL ← | pseudogene, CPS‑53 (KpLE1) prophage,Phage or Prophage Related |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,471,819 | 0 | A | G | 100.0% | 167.5 / NA | 44 | pseudogene (304/579 nt) | yfdL | pseudogene, CPS‑53 (KpLE1) prophage,Phage or Prophage Related |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (21/23); total (21/23) | |||||||||||
CCGCAGACATCTATTCGGAAATGCAATCGGAAAATAGGTTACTGTGTCCTGAGACGTCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGAT > NC_000913/2471688‑2471950 | ccGCAGACATCTATTCGGAAATGCAATCGGAAAATAGGTTACTGTGTCCTGAGACGTCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATa > 2:622204/1‑139 (MQ=255) cAGACATCTATTCGGAAATGCAATCGGAAAATAGGTTACTGTGTCCTGAGACGTCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATaaaa < 2:343581/139‑1 (MQ=255) aTCTATTCGGAAATGCAATCGGAAAATAGGTTACTGTGTCCTGAGACGTCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTAcc < 2:243086/139‑1 (MQ=255) ttCGGAAATGCAATCGGAAAATAGGTTACTGTGTCCTGAGACGTCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCatat < 1:697055/139‑1 (MQ=255) cGGAAATGCAATCGGAAAATAGGTTACTGTGTCCTGAGACGTCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCa < 1:38995/139‑1 (MQ=255) ggAAATGCAATCGGAAAATAGGTTACTGTGTCCTGAGACGTCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAg > 1:58127/1‑139 (MQ=255) tGCAATCGGAAAATAGGTTACTGTGTCCTGAGACGTCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCa > 2:375103/1‑116 (MQ=255) tGCAATCGGAAAATAGGTTACTGTGTCCTGAGACGTCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCa < 1:375103/116‑1 (MQ=255) ggAAAATAGGTTACTGTGTCCTGAGACGTCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCa > 2:551422/1‑109 (MQ=255) ggAAAATAGGTTACTGTGTCCTGAGACGTCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCa < 1:551422/109‑1 (MQ=255) ggAAAATAGGTTACTGTGTCCTGAGACGTCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCg > 2:401344/1‑139 (MQ=255) aaTAGGTTACTGTGTCCTGAGACGTCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGcccc < 1:401344/139‑1 (MQ=255) aaTAGGTTACTGTGTCCTGAGACGTCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGcccc < 2:740066/139‑1 (MQ=255) ggTTACTGTGTCCTGAGACGTCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTc < 1:70335/139‑1 (MQ=255) tgtgTCCTGAGACGTCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACa < 2:297327/139‑1 (MQ=255) tCCTGAGACGTCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTc > 1:551125/1‑139 (MQ=255) tCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTAcc < 2:31836/91‑1 (MQ=255) tCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTAcc > 1:31836/1‑91 (MQ=255) tCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCata < 1:84740/95‑1 (MQ=255) tCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCata > 2:84740/1‑95 (MQ=255) tCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGc > 1:123353/1‑139 (MQ=255) tCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGc > 2:408298/1‑139 (MQ=255) tCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGc > 2:340411/1‑139 (MQ=255) gAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTcc < 1:408298/139‑1 (MQ=255) cATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTAcc < 2:404393/82‑1 (MQ=255) cATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTAcc > 1:404393/1‑82 (MQ=255) ttGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCgaga < 1:340411/139‑1 (MQ=255) ttAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTg > 1:620628/1‑139 (MQ=255) ccGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCg > 2:290899/1‑139 (MQ=255) ccGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCg > 1:611566/1‑139 (MQ=255) gATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGTGAGCCTTTTGCACCGTGc > 1:297332/1‑139 (MQ=255) gATGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGc > 2:433689/1‑139 (MQ=255) tGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGccc < 1:723096/71‑1 (MQ=255) tGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGccc > 2:723096/1‑71 (MQ=255) tGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCg < 2:156072/139‑1 (MQ=255) tGGCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCg < 2:551125/139‑1 (MQ=255) gCAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTc < 1:622204/139‑1 (MQ=255) cAATTTTTGATATCCAGGAACTGAAGCAGGAAGCATAAAACTATCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTcc > 1:278543/1‑139 (MQ=255) atatCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGccc > 2:265823/1‑59 (MQ=255) atatCCAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGccc < 1:265823/59‑1 (MQ=255) cAGGAACTGAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGcc < 1:290899/139‑1 (MQ=255) gAAGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGAt < 2:123353/139‑1 (MQ=255) aaGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCt < 1:33534/71‑1 (MQ=255) aaGCAGGAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCt > 2:33534/1‑71 (MQ=255) | CCGCAGACATCTATTCGGAAATGCAATCGGAAAATAGGTTACTGTGTCCTGAGACGTCAGCGGAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGAT > NC_000913/2471688‑2471950 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |