| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,668,544 | (C)6→7 | coding (645/1398 nt) | yhjA ← | putative cytochrome C peroxidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,668,538 | 1 | . | C | 100.0% | 245.3 / NA | 65 | G217G (GGC→GGG) | yhjA | putative cytochrome C peroxidase |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (34/31); total (34/31) | |||||||||||
ATCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGCTGCA > NC_000913/3668412‑3668671 | aTCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCAtt > 2:651628/1‑139 (MQ=255)aTCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCAtt < 1:651628/139‑1 (MQ=255) cAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAGTCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGc < 2:1200819/139‑1 (MQ=255) ttGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGc > 2:1297572/1‑139 (MQ=255) aCGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAgc < 2:590164/139‑1 (MQ=255) cccAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGaaa < 2:147797/139‑1 (MQ=255) cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCa > 1:305250/1‑105 (MQ=255) cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCa < 2:305250/105‑1 (MQ=255) cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGc > 1:1266827/1‑109 (MQ=255) cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGc < 2:1266827/109‑1 (MQ=255) cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAAt < 1:1095916/117‑1 (MQ=255) cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAAt > 2:1095916/1‑117 (MQ=255) cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGaa < 2:290888/128‑1 (MQ=255) cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGaa > 2:445302/1‑128 (MQ=255) cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGaa > 1:290888/1‑128 (MQ=255) cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGaa < 1:445302/128‑1 (MQ=255) cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATc > 1:1448440/1‑139 (MQ=255) cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATc > 1:89905/1‑139 (MQ=255) cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATc > 1:578590/1‑139 (MQ=255) cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑ccccccc > 2:1108096/1‑97 (MQ=255) cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑ccccccc > 2:1294540/1‑97 (MQ=255) cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑ccccccc < 1:1108096/98‑2 (MQ=255) cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑ccccccc < 1:1294540/98‑2 (MQ=255) cTCAACGTTAAATACTGAGTTAAATACCGTCGCCGCGTTATTCGGCCCAACTGCGCCACCAACACCAATCGAGGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATc > 1:1464759/1‑139 (MQ=255) aaTACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATaaa < 1:1458446/139‑1 (MQ=255) cTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg < 2:578590/139‑1 (MQ=255) cTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg < 1:211263/139‑1 (MQ=255) cTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg < 1:1297572/139‑1 (MQ=255) cTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg < 2:29654/139‑1 (MQ=255) tGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCg > 1:319642/1‑129 (MQ=255) tGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCg < 2:319642/129‑1 (MQ=255) gAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGa > 1:874359/1‑139 (MQ=255) aGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATg < 1:517559/109‑1 (MQ=255) aGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATg > 2:517559/1‑109 (MQ=255) gTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATc > 2:289031/1‑139 (MQ=255) tACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg > 1:725034/1‑129 (MQ=255) tACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg < 2:725034/129‑1 (MQ=255) tACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATa < 2:1381790/139‑1 (MQ=255) cGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAg > 1:84627/1‑93 (MQ=255) cGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAg < 2:84627/93‑1 (MQ=255) tCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa > 2:559715/1‑111 (MQ=255) tCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa < 1:559715/111‑1 (MQ=255) tCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg > 2:1255132/1‑124 (MQ=255) tCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg < 1:1255132/124‑1 (MQ=255) tCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAgcg > 1:571052/1‑139 (MQ=255) ggCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGTCGATAAACGGGGATCGTGATACAGCGCa > 1:880195/1‑139 (MQ=255) gcgcGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTAt < 2:1117383/106‑1 (MQ=255) gcgcGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTAt > 1:1117383/1‑106 (MQ=255) cTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg > 2:911156/1‑103 (MQ=255) cTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg < 1:911156/103‑1 (MQ=255) ccaacaccaaTCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCg < 2:1464759/139‑1 (MQ=255) ccaacaccaaTCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCg < 2:1448440/139‑1 (MQ=255) accaaTCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg < 2:1377017/90‑1 (MQ=255) accaaTCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg > 1:1377017/1‑90 (MQ=255) tCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGtt > 2:469120/1‑139 (MQ=255) tCGATGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGtt > 1:647914/1‑139 (MQ=255) tGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTg < 2:509106/139‑1 (MQ=255) tGTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTg > 1:509106/1‑139 (MQ=255) gTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGaaa > 2:204298/1‑56 (MQ=255) gTTTTTCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGaaa < 1:204298/56‑1 (MQ=255) ttCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGa < 2:89905/139‑1 (MQ=255) tCTGCCATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGAt > 2:945814/1‑139 (MQ=255) ccATCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGc > 1:791462/1‑139 (MQ=255) aTCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGCTg > 1:386452/1‑139 (MQ=255) aTCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGCTg > 1:598951/1‑139 (MQ=255) aTCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGCTg > 1:1247467/1‑139 (MQ=255) tCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACg > 1:1377686/1‑66 (MQ=255) tCGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACg < 2:1377686/66‑1 (MQ=255) cGACGCCCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGCTGCa < 2:874359/139‑1 (MQ=255) | ATCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑CCCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGCTGCA > NC_000913/3668412‑3668671 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |