| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2092986 = | 177 (3.260) | 3 (0.060) | 3/198 | 4.7 | 1.8% | coding (589/1071 nt) | hisC | histidinol‑phosphate aminotransferase |
| ? | NC_000913 | = 2092981 | 170 (3.580) | coding (584/1071 nt) | hisC | histidinol‑phosphate aminotransferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGGGTAGGGGGCGATCACTTTCATCAGCAGGTTGATGACTTCTTCGTTTGCCAGCGTAAATCCGCAACGAAGCCCCGCCAGAGCAAAAGCTTTCGACAGTGTGCGTAAAATAGCCAGGTGCGGATATTCCGCCAGCCAGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2093129‑2092986‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagccagccagcGATGCCTGCGGGCAAAACTCGATATAGGCTTCATCGGCAACCACAATCGCCTTACCGCGGGTTAACTCCAGCAGGGTGCGAAAATCCTGCGGATTGATCAGTTGCCCGGTCGGGTTATTGGGGCTGCAAACATAAAC < NC_000913/2092981‑2092845 CGGGTAGGGGGCGATCACTTTCATCAGCAGGTTGATGACTTCTTCGTTTGCCAGCGTAAATCCGCAACGAAGCCCCGCCAGAGCAAAAGCTTTCGACAGTGTGCGTAAAATAGCCAGGTGCGGATATTCCGCCAGCCAG > 1:614438/1‑139CGGGTAGGGGGCGATCACTTTCATCAGCAGGTTGATGACTTCTTCGTTTGCCAGCGTAAATCCGCAACGAAGCCCCGCCAGAGCAAAAGCTTTCGACAGTGTGCGTAAAATAGCCAGGTGCGGATATTCCGCCAGCCAG < 1:922632/139‑1 AGGGGGCGATCACTTTCATCAGCAGGTTGATGACTTCTTCGTTTGCCAGCGTAAATCCGCAACGAAGCCCCGCCAGAGCAAAAGCTTTCGACAGTGTGCGTAAAATAGCCAGGTGCGGATATTCCGCCAGCCAGCCAGC > 2:141553/1‑139 ATCACTTTCATCAGCAGGTTGATGACTTCTTCGTTTGCCAGCGTAAATCCGCAACGAAGCCCCGCCAGAGCAAAAGCTTTCGACAGTGTGCGTAAAATAGCCAGGTGCGGATATTCCGCCAGCCAGCCAG > 1:376919/1‑130 ATCACTTTCATCAGCAGGTTGATGACTTCTTCGTTTGCCAGCGTAAATCCGCAACGAAGCCCCGCCAGAGCAAAAGCTTTCGACAGTGTGCGTAAAATAGCCAGGTGCGGATATTCCGCCAGCCAGCCAG < 2:376919/130‑1 TTCATCAGCAGGTTGATGACTTCTTCGTTTGCCAGCGTAAATCCGCAACGAAGCCCCGCCAGAGCAAAAGCTTTCGACAGTGTGCGTAAAATAGCCAGGTGCGGATATTCCGCCAGCCAGCCAGCGATGCCTGCGGGCA < 1:78294/139‑1 GCCAGCGTAAATCCGCAACGAAGCCCCGCCAGAGCAAAAGCTTTCGACAGTGTGCGTAAAATAGCCAGGTGCGGATATTCCGCCAGCCAGCCAGCGATGCCTGCGGGCAAAACTCGATATAGGCTTCATCGGCAACCAC < 1:196709/139‑1 GCCAGCGTAAATCCGCAACGAAGCCCCGCCAGAGCAAAAGCTTTCGACAGTGTGCGTAAAATAGCCAGGTGCGGATATTCCGCCAGCCAGCCAGCGATGCCTGCGGGCAAAACTCGATATAGGCTTCATCGGCAACCAC > 2:196709/1‑139 AGCCCCGCCAGAGCAAAAGCTTTCGACAGTGTGCGTAAAATAGCCAGGTGCGGATATTCCGCCA < 2:889687/64‑1 AGCCCCGCCAGAGCAAAAGCTTTCGACAGTGTGCGTAAAATAGCCAGGTGCGGATATTCCGCCA > 1:889687/1‑64 CGCCAGAGCAAAAGCTTTCGACAGTGTGCGTAAAATAGCCAGGTGCGGATATTCCGCCA > 1:327778/1‑59 CGCCAGAGCAAAAGCTTTCGACAGTGTGCGTAAAATAGCCAGGTGCGGATATTCCGCCA < 2:327778/59‑1 GCCAGCCAGCCAGCGATGCCTGCGGGCAAAACTCGATATAGGCTTCATCGGCAACCACAATCGCCTTACCGCGGGTTAACTCCAGCAGGGTGCGAAAATCCTGCG > 1:929133/1‑105 GCCAGCCAGCCAGCGATGCCTGCGGGCAAAACTCGATATAGGCTTCATCGGCAACCACAATCGCCTTACCGCGGGTTAACTCCAGCAGGGTGCGAAAATCCTGCG < 2:929133/105‑1 CCAGCCAGCCAGCGATGCCTGCGGGCAAAACTCGATATAGGCTTCATCGGCAACCACAATCGCCTTACCGCGGGTTAACTCCAGCAGGGTGCGAAAATCCTGCGGATTGATCAGTTGCCCGGTCGGGTTATTGGGGCTG < 2:89708/139‑1 CCAGCCAGCCAGCGATGCCTGCGGGCAAAACTCGATATAGGCTTCATCGGCAACCACAATCGCCTTACCGCGGGTTAACTCCAGCAGGGTGCGAAAATCCTGCGGATTGAT > 1:819856/1‑111 CCAGCCAGCCAGCGATGCCTGCGGGCAAAACTCGATATAGGCTTCATCGGCAACCACAATCGCCTTACCGCGGGTTAACTCCAGCAGGGTGCGAAAATCCTGCGGATTGAT < 2:819856/111‑1 CAGCCAGCCAGCGATGCCTGCGGGCAAAACTCGATATAGGCTTCATCGGCAACCACAATCGCCTTACCGCGGGTTAACTCCAGCAGGGTGCGAAAATCCTGCGGATTGATCAGTTGCCCGGTCGGGTTATTGGGGCTGC < 2:1027121/139‑1 GCGATGCCTGCGGGCAAAACTCGATATAGGCTTCATCGGCAACCACAATCGCCTTACCGCGGGTTAACTCCAGCAGGGTGCGAAAATCCTGCGGATTGATCAGTTGCCCGGTCGGGTTATTGGGGCTGCAAACATAAAC < 2:1087991/139‑1 GCGATGCCTGCGGGCAAAACTCGATATAGGCTTCATCGGCAACCACAATCGCCTTACCGCGGGTTAACTCCAGCAGGGTGCGAAAATCCTGCGGATTGATCAGTTGCCCGGTCGGGTTATTGGGGCTGCAAACATAAAC < 1:1090905/139‑1 GCGATGCCTGCGGGCAAAACTCGATATAGGCTTCATCGGCAACCACAATCGCCTTACCGCGGGTTAACTCCAGCAGGGTGCGAAAATCCTGCGGATTGATCAGTTGCCCGGTCGGGTTATTGGGGCTGCAAACATAAAC < 1:332301/139‑1 GCGATGCCTGCGGGCAAAACTCGATATAGGCTTCATCGGCAACCACAATCGCCTTACCG < 2:187751/59‑1 GCGATGCCTGCGGGCAAAACTCGATATAGGCTTCATCGGCAACCACAATCGCCTTACCG > 1:187751/1‑59 CGGGTAGGGGGCGATCACTTTCATCAGCAGGTTGATGACTTCTTCGTTTGCCAGCGTAAATCCGCAACGAAGCCCCGCCAGAGCAAAAGCTTTCGACAGTGTGCGTAAAATAGCCAGGTGCGGATATTCCGCCAGCCAGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2093129‑2092986‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagccagccagcGATGCCTGCGGGCAAAACTCGATATAGGCTTCATCGGCAACCACAATCGCCTTACCGCGGGTTAACTCCAGCAGGGTGCGAAAATCCTGCGGATTGATCAGTTGCCCGGTCGGGTTATTGGGGCTGCAAACATAAAC < NC_000913/2092981‑2092845 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |