| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,936,381 | C→T | T35M (ACG→ATG) | rbsB → | D‑ribose ABC transporter periplasmic binding protein, ribose chemotaxis receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,936,381 | 0 | C | T | 100.0% | 95.8 / NA | 28 | T35M (ACG→ATG) | rbsB | D‑ribose ABC transporter periplasmic binding protein, ribose chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (11/17); total (11/17) | |||||||||||
ATAACGACTACAGGACATCTTGAATATGAACATGAAAAAACTGGCTACCCTGGTTTCCGCTGTTGCGCTAAGCGCCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGC‑‑‑TGGTGGTCTCCACGCTTAACAACCCGTTCTTTGTATCGCTGAAAGATGGCGCGCAGAAAGAGGCGGATAAACTTGGCTATAACCTGGTGGTGCTGGACTCCCAGAACAACCCGGCGAAAGAGCTGGCGAACGTGCAGGACTTAAC > NC_000913/3936253‑3936513 | ataaCGACTACAGGACATCTTGAATATGAACATGAAAAAACTGGCTACCCTGGTTTCCGCTGTTGCGCTAAGCGCCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGC‑‑‑TGGTGGTCTCCATGCTTaacaac < 2:371918/139‑1 (MQ=255)ataaCGACTACAGGACATCTTGAATATGAACATGAAAAAACTGGCTACCCTGGTTTCCGCTGTTGCGCTAAGCGCCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGC‑‑‑TGGTGGTCTCCATGCTTaacaac < 1:45053/139‑1 (MQ=255) tACAGGACATCTTGAATATGAACATGAAAAAACTGGCTACCCTGGTTTCCGCTGTTGCGCTAAGCGCCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGC‑‑‑TGGTGGTCTCCATGCTTAACAACCCGTTCtt > 2:312671/1‑139 (MQ=255) aGGACATCTTGAATATGAACATGAAAAAACTGGCTACCCTGGTTTCCGCTGTTGCGCTAAGCGCCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGC‑‑‑TGGTGGTCTCCATGCTTAACAACCCGTTCTTTGt < 1:261788/139‑1 (MQ=255) ggACATCTTGAATATGAACATGAAAAAACTGGCTACCCTGGTTTCCGCTGTTGCGCTAAGCGCCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGC‑‑‑TGGTGGTCTCCATGCTTAACAACCCGTTCTTTGTa < 2:114428/139‑1 (MQ=255) gACATCTTGAATATGAACATGAAAAAACTGGCTACCCTGGTTTCCGCTGTTGCGCTAAGCGCCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGC‑‑‑TGGTGGTCTCCATGCTTAACAACCCGTTCTTTGTAt < 1:98281/139‑1 (MQ=255) cATCTTGAATATGAACATGAAAAAACTGGCTACCCTGGTTTCCGCTGTTGCGCTAAGCGCCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGCTGGTGGTGGTCTCCATGCTTAACAACCCGTTCTTTGTa > 1:26090/1‑139 (MQ=255) tCTTGAATATGAACATGAAAAAACTGGCTACCCTGGTTTCCGCTGTTGCGCTAAGCGCCACCGTCAGTGCGAATGCGATGACAAAAGACACCATCGCGC‑‑‑TGGTGGTCTCCATGCTTAACAACCCGTTCTTTGTATCGCt < 2:214818/139‑1 (MQ=255) cTTGAATATGAACATGAAAAAACTGGCTACCCTGGTTTCCGCTGTTGCGCTAAGCGCCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGC‑‑‑TGGTGGTCTCCATGCTTAACAACCCGTTCTTTGTATCGCTg > 2:418601/1‑139 (MQ=255) aCATGAAAAAACTGGCTACCCTGGTTTCCGCTGTTGCGCTAAGCGCCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGC‑‑‑TGGTGGTCTCCATGCTTAACAACCCGTTCTTTGTATCGCTGAAAGATGgcgc > 1:449816/1‑139 (MQ=255) gCTACCCTGGTTTCCGCTGTTGCGCTAAGCGCCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGC‑‑‑TGGTGGTCTCCATGCTTAACAAccc > 1:243271/1‑98 (MQ=255) gCTACCCTGGTTTCCGCTGTTGCGCTAAGCGCCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGC‑‑‑TGGTGGTCTCCATGCTTAACAAccc < 2:243271/98‑1 (MQ=255) aCCCTGGTTTCCGCTGTTGCGCTAAGCGCCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGC‑‑‑TGGTGGTCTCCATGCTTAACAACCCGTTCTTTGTATCGCTGAAAGATGGCGCGCAGAAAGAGGCGGATa < 1:418601/139‑1 (MQ=255) tGGTTTCCGCTGTTGCGCTAAGCGCCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGC‑‑‑TGGTGGTCTCCATGCTTAACAACCCGTTCTTTGTATCGCTGAAAGATGGCGCGCAGAAAGAGGCGGATAAACt < 2:138764/139‑1 (MQ=255) tGGTTTCCGCTGTTGCGCTAAGCGCCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGC‑‑‑TGGTGGTCTCCATGCTTAACAACCCGTTCTTTGTATCGCTGAAAGATGGCGCGCAGAAAGAGGCGGATAAACt < 1:29013/139‑1 (MQ=255) tGGTTTCCGCTGTGCCGCTAAGCGCCACCGTCATTGCGAATGCGATGGCAAAAGACACCTTCGCGC‑‑‑CGGTGGACTCCATGCTTCACACCCCGTTCTTTGTAGCGCGGAAAGATTGTGAGCAGAAAGAGTAGGATAATCt < 1:143702/139‑1 (MQ=255) ccGCTGTTGCGCTAAGCGCCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGC‑‑‑TGGTGGTCTCCATGCTTAACAACCCGTTCTTTGTATCGCTGAAAGATGGCGCGCAGAAAGAGGCGGATAAACTTGGCta < 1:317493/139‑1 (MQ=255) cGCTGTTGCGCTAAGCGCCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGC‑‑‑TGGTGGTCTCCATGCTTAACAAccc > 1:36069/1‑84 (MQ=255) cGCTGTTGCGCTAAGCGCCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGC‑‑‑TGGTGGTCTCCATGCTTAACAAccc < 2:36069/84‑1 (MQ=255) cTGTTGCGCTAAGCGCCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGCTGGTGGTGGTCTCCATGCTTAACAACCCGTTCTTTGTATCGCTGAAAGATGGCGCGCAGAAAGAGGCGGATAAACTTGGCta < 2:26090/139‑1 (MQ=255) aGCGCCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGC‑‑‑TGGTGGTCTCCATGCTTAACAACCCGTTCTTTGTATCGCTGAAAGATGGCGCGCAGAAAGAGGCGGATAAACTTGGCTATAACCTGGTGGTGc < 2:449816/139‑1 (MQ=255) gcgcCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGC‑‑‑TGGTGGTCTCCATGCTTAACAACCCGTTCTTTGTATCGCTGAAAGATGGCGCGCAGAAAGAGGCGGATAAACTTGGCTATAACCTGGTGGTGCt < 2:144113/139‑1 (MQ=255) ccATCGCGC‑‑‑TGGTGGTCTCCATGCTTAACAACCCGTTCTTTGTATCGCTGAAAGATGGCGCGCAGAAAGAGGCGGATAAAc > 1:475732/1‑81 (MQ=255) ccATCGCGC‑‑‑TGGTGGTCTCCATGCTTAACAACCCGTTCTTTGTATCGCTGAAAGATGGCGCGCAGAAAGAGGCGGATAAAc < 2:475732/81‑1 (MQ=255) cATCGCGC‑‑‑TGGTGGTCTCCATGCTTAACAACCCGTTCTTTGTATCGCTGAAAGATGgcg > 1:445995/1‑59 (MQ=255) cATCGCGC‑‑‑TGGTGGTCTCCATGCTTAACAACCCGTTCTTTGTATCGCTGAAAGATGgcg < 2:445995/59‑1 (MQ=255) c‑‑‑TGGTGGTCTCCATGCTTAACAACCCGTTCTTTGTATCGCTGAAAGATGGCGCGCAGAAAGAGGCGGATAAACTTGGCTATAACCTGGTGGTGCTGGACTCCCAGAACAACCCGGCGAAAGAGCTGGCGAACGTGCAgg > 1:25352/1‑139 (MQ=255) tggtggTCTCCATGCTTAACAACCCGTTCTTTGTATCGCTGAAAGATGGCGCGCAGAAAGAGGCGGATAAACTTGGCTATAACCTGGTGGTGCTGGACTCCCAGAACAACCCGGCGAAAGAGCTGGCGAACGTGCAGGa > 2:349241/1‑139 (MQ=255) tctcCATGCTTAACAACCCGTTCTTTGTATCGCTGAAAGATGGCGCGCAGAAAGAGGCGGATAAACTTGGCTATAACCTGGTGGTGCTGGACTCCCAGAACAACCCGGCGAAAGAGCTGGCGAACGTGCAGGACTTAAc > 2:268815/1‑139 (MQ=255) | ATAACGACTACAGGACATCTTGAATATGAACATGAAAAAACTGGCTACCCTGGTTTCCGCTGTTGCGCTAAGCGCCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGC‑‑‑TGGTGGTCTCCACGCTTAACAACCCGTTCTTTGTATCGCTGAAAGATGGCGCGCAGAAAGAGGCGGATAAACTTGGCTATAACCTGGTGGTGCTGGACTCCCAGAACAACCCGGCGAAAGAGCTGGCGAACGTGCAGGACTTAAC > NC_000913/3936253‑3936513 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |