Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,426,252 A→G intergenic (+170/‑202) ydaY → / → tmpR pseudogene, Rac prophage,Phage or Prophage Related/Rac prophage, pseudogene, tail protein family,Phage or Prophage Related, putative alpha helix protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,426,2520AG100.0% 503.8 / NA 131intergenic (+170/‑202)ydaY/tmpRpseudogene, Rac prophage,Phage or Prophage Related/Rac prophage, pseudogene, tail protein family,Phage or Prophage Related, putative alpha helix protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (61/70);  total (61/70)

Only 100 of 131 total aligned reads displayed.

ATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCACTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATCGATGATGCTCCTGGAGAAAAGCATTGCGTGGCCTCGTAATCGCT  >  NC_000913/1426121‑1426386
                                                                                                                                   |                                                                                                                                      
atatCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATg                                                                                                                                 >  1:155941/1‑139 (MQ=255)
   tCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGAcc                                                                                                                              >  2:106792/1‑139 (MQ=255)
   tCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGAcc                                                                                                                              >  1:978257/1‑139 (MQ=255)
    cccGTGCCCGACGTTATGCTGGAATGACTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCa                                                                                                                             <  2:714486/139‑1 (MQ=255)
      cGTGCCCGACGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGt                                                                                                                           >  2:374681/1‑139 (MQ=255)
       gTGCCCGACGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTa                                                                                                                          <  1:271065/139‑1 (MQ=255)
        tGCCCGACGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTAt                                                                                                                         >  1:527485/1‑139 (MQ=255)
         gCCCGACGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCTGTGATCTTTGCGCTGGATGACCAGTAtt                                                                                                                        <  1:695620/139‑1 (MQ=255)
           ccGACGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTAtttt                                                                                                                      <  1:106792/139‑1 (MQ=255)
              aCGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAg                                                                                                                   >  2:859257/1‑139 (MQ=255)
                  tATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGc                                                                                                               <  2:775005/139‑1 (MQ=255)
                  tATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGc                                                                                                               <  1:732690/139‑1 (MQ=255)
                  tATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGc                                                                                                               <  1:497323/139‑1 (MQ=255)
                  tATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGc                                                                                                               <  1:181368/139‑1 (MQ=255)
                   aTGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCa                                                                                                              >  1:407970/1‑139 (MQ=255)
                   aTGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCa                                                                                                              >  1:963911/1‑139 (MQ=255)
                         gAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGc                                                                                                               >  2:433230/1‑132 (MQ=255)
                         gAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGc                                                                                                               <  1:433230/132‑1 (MQ=255)
                              gCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAgt                                                                                                   >  2:462370/1‑139 (MQ=255)
                                tGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGa                                                                                                                 >  1:695558/1‑123 (MQ=255)
                                tGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGa                                                                                                                 <  2:695558/123‑1 (MQ=255)
                                tGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCa                                                                                                              <  1:17931/126‑1 (MQ=255)
                                tGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCa                                                                                                              >  2:17931/1‑126 (MQ=255)
                                       cctttgcctttATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGAc                                                                                                                               <  2:1062782/102‑1 (MQ=255)
                                       cctttgcctttATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGAc                                                                                                                               >  1:1062782/1‑102 (MQ=255)
                                       cctttgcctttATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTa                                                                                          >  2:500791/1‑139 (MQ=255)
                                        ctttgcctttATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCa                                                                                                              >  1:1111359/1‑118 (MQ=255)
                                        ctttgcctttATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCa                                                                                                              <  2:1111359/118‑1 (MQ=255)
                                         tttgcctttATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTgg                                                                                                                                    >  2:959770/1‑95 (MQ=255)
                                             cctttATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTaca                                                                                    <  1:987453/139‑1 (MQ=255)
                                             cctttATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTaca                                                                                    <  1:784666/139‑1 (MQ=255)
                                             cctttATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTaca                                                                                    <  2:963911/139‑1 (MQ=255)
                                               tttATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACAct                                                                                  <  1:805055/139‑1 (MQ=255)
                                                 tATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTa                                                                                      >  1:364263/1‑133 (MQ=255)
                                                     tctGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTa                                                                            <  1:933903/139‑1 (MQ=255)
                                                       tGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACa                                                                          >  2:795699/1‑139 (MQ=255)
                                                             agaTAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAg                                                                                                                <  2:133626/95‑1 (MQ=255)
                                                             agaTAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAg                                                                                                                >  1:133626/1‑95 (MQ=255)
                                                             agaTAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGc                                                                                                               >  2:313198/1‑96 (MQ=255)
                                                             agaTAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGc                                                                                                               <  1:313198/96‑1 (MQ=255)
                                                             agaTAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCa                                                                                                              >  1:4071/1‑97 (MQ=255)
                                                               aTAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTaca                                                                                    <  2:1028359/121‑1 (MQ=255)
                                                               aTAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTaca                                                                                    >  1:1028359/1‑121 (MQ=255)
                                                                       atatTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTc                                                          >  1:1024059/1‑139 (MQ=255)
                                                                        tatTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACa                                                                          <  1:855005/122‑1 (MQ=255)
                                                                        tatTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACa                                                                          >  2:855005/1‑122 (MQ=255)
                                                                        tatTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCt                                                         <  2:978257/139‑1 (MQ=255)
                                                                        tatTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCt                                                         <  2:1047208/139‑1 (MQ=255)
                                                                         atTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGc                                                                                                               >  2:404703/1‑84 (MQ=255)
                                                                         atTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTa                                                                                                     >  2:405010/1‑94 (MQ=255)
                                                                         atTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTa                                                                                                     <  1:405010/94‑1 (MQ=255)
                                                                            tAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGTGCTGGATGACCAGTATTTTCAGGAGc                                                                                                               >  1:1045550/1‑81 (MQ=255)
                                                                             aGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCa                                                                                                              <  2:229079/81‑1 (MQ=255)
                                                                             aGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACg                                                                                        >  2:607370/1‑103 (MQ=255)
                                                                             aGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACg                                                                                        <  1:607370/103‑1 (MQ=255)
                                                                              gCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTa                                                                            <  1:69202/114‑1 (MQ=255)
                                                                               ccACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTa                                                                            >  1:128554/1‑113 (MQ=255)
                                                                               ccACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTa                                                                            <  2:128554/113‑1 (MQ=255)
                                                                                  cTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAgtgtgtg                                                                                                       >  2:609115/1‑83 (MQ=255)
                                                                                  cTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAgtgtgtg                                                                                                       <  1:609115/83‑1 (MQ=255)
                                                                                  cTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAAt                                               >  2:790741/1‑139 (MQ=255)
                                                                                   tCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGAc                                                                                                                               >  2:142823/1‑58 (MQ=255)
                                                                                   tCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGAc                                                                                                                               <  1:142823/58‑1 (MQ=255)
                                                                                       ccGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGa                                                                                                                                   <  2:1110276/50‑1 (MQ=255)
                                                                                       ccGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGa                                                                                                                                   >  1:1110276/1‑50 (MQ=255)
                                                                                        cGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATCgatga                                         <  1:795699/139‑1 (MQ=255)
                                                                                             ttgattgaGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAg                                                                                                                <  2:636198/63‑1 (MQ=255)
                                                                                              tgattgaGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATCGATGATGCTcc                                   <  2:57822/139‑1 (MQ=255)
                                                                                              tgattgaGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATCGATGATGCTcc                                   <  2:1024059/139‑1 (MQ=255)
                                                                                                attgaGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCa                                                                                                              <  2:117124/62‑1 (MQ=255)
                                                                                                attgaGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCa                                                                                                              >  2:418123/1‑62 (MQ=255)
                                                                                                attgaGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCa                                                                                                              >  1:117124/1‑62 (MQ=255)
                                                                                                attgaGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAgtgtgtg                                                                                                       >  2:1032563/1‑69 (MQ=255)
                                                                                                attgaGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAgtgtgtg                                                                                                       <  1:1032563/69‑1 (MQ=255)
                                                                                                attgaGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTTTttaa                                                     >  1:587444/1‑119 (MQ=255)
                                                                                                attgaGCGCGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTTTttaa                                                     <  2:587444/119‑1 (MQ=255)
                                                                                                     gcgcGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACa                                                                          <  1:913882/93‑1 (MQ=255)
                                                                                                     gcgcGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATc                                              >  1:467139/1‑121 (MQ=255)
                                                                                                     gcgcGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATc                                              <  2:467139/121‑1 (MQ=255)
                                                                                                     gcgcGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATCGATGATGCTCCTGGAGaa                            <  2:407970/139‑1 (MQ=255)
                                                                                                     gcgcGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATCGATGATGCTCCTGGAGaa                            >  1:1060812/1‑139 (MQ=255)
                                                                                                     gcgcGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATCGATGATGCTCCTGGAGaa                            >  2:861585/1‑139 (MQ=255)
                                                                                                     gcgcGATGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATCGATGATGCTCCTGGAGaa                            >  1:504439/1‑139 (MQ=255)
                                                                                                          ttGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATCGATGATGCTCCTGGAGAAAAGCa                       <  2:521604/138‑1 (MQ=255)
                                                                                                          aTGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTaca                                                                                    >  1:2427/1‑78 (MQ=255)
                                                                                                          aTGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTaca                                                                                    <  2:2427/78‑1 (MQ=255)
                                                                                                           tGAATTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATCGATGATGCTCCTGGAGAAAAGCAt                      >  1:843893/1‑139 (MQ=255)
                                                                                                              aTTTGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATCGATGATGCTCCTGGAGAAAAGCATTGc                   <  1:434605/139‑1 (MQ=255)
                                                                                                               tttGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATCGATGATGCTCCTGGAGAAAAGCATTGCg                  >  1:219453/1‑139 (MQ=255)
                                                                                                               tttGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATCGATGATGCTCCTGGAGAAAAGCATTGCg                  <  1:790741/139‑1 (MQ=255)
                                                                                                                ttGAAGCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATCGATGATGCTCCTGGAGAAAAGCATTGCGt                 <  2:1060812/139‑1 (MQ=255)
                                                                                                                     gCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAg                                                                                                    <  2:583081/51‑1 (MQ=255)
                                                                                                                     gCAGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAg                                                                                                    >  1:583081/1‑51 (MQ=255)
                                                                                                                       aGTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATCGATGATGCTCCTGGAGAAAAGCATTGCGTGGCCTCg          <  1:229539/139‑1 (MQ=255)
                                                                                                                        gTGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATCGATGATGCTCCTGGAGAAAAGCATTGCGTGGCCTCGt         <  2:71999/139‑1 (MQ=255)
                                                                                                                         tGATCTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATCGATGATGCTCCTGGAGAAAAGCATTGCGTGGCCTCGTa        <  2:219453/139‑1 (MQ=255)
                                                                                                                             cTTTGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATCGATGATGCTCCTGGAGAAAAGCATTGCGTGGCCTCGTAATCg    <  2:373565/139‑1 (MQ=255)
                                                                                                                               ttGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATCGATGATGCTCCTGGAGAAAAGCATTGCGTGGCCTCGTAATCGCt  <  1:374681/139‑1 (MQ=255)
                                                                                                                               ttGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATCGATGATGCTCCTGGAGAAAAGCATTGCGTGGCCTCGTAATCGCt  <  2:278217/139‑1 (MQ=255)
                                                                                                                               ttGCGCTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATCGATGATGCTCCTGGAGAAAAGCATTGCGTGGCCTCGTAATCGCt  <  1:861585/139‑1 (MQ=255)
                                                                                                                                   |                                                                                                                                      
ATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCACTCATCCGGTATTGATTGAGCGCGATGAATTTGAAGCAGTGATCTTTGCACTGGATGACCAGTATTTTCAGGAGCAGTGTGTGTAGTTGTTAATTACGTACACTCTGTTACAGAGATGTGATGGTGTCTTTAATTAAATCGATGATGCTCCTGGAGAAAAGCATTGCGTGGCCTCGTAATCGCT  >  NC_000913/1426121‑1426386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: