| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,036,909 | T→C | Q415R (CAG→CGG) | yedV ← | putative sensory kinase in two‑component regulatory system with YedW |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,036,909 | 0 | T | C | 97.9% | 344.3 / ‑2.4 | 93 | Q415R (CAG→CGG) | yedV | putative sensory kinase in two‑component regulatory system with YedW |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (49/42); total (50/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.37e-01 | |||||||||||
TACTGAAGCCCTATGTTAATTTCTTTGCGGTAACGTAATCCGGAACACATTATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCTGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGTATCAAGAAAACTGGTTATATG > NC_000913/2036779‑2037042 | tACTGAAGCCCTATGTTAATTTCTTTGCGGTAACGTAATCCGGAACACATTATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACg > 1:149406/1‑139 (MQ=255)tACTGAAGCCCTATGTTAATTTCTTTGCGGTAACGTAATCCGGAACACATTATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACg > 1:964533/1‑139 (MQ=255) aCTGAAGCCCTATGTTAATTTCTTTGCGGTAACGTAATCCGGAACACATTATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACgg > 1:806824/1‑139 (MQ=255) ccTATGTTAATTTCTTTGCGGTAACGTAATCCGGAACACATTATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGAcgc > 1:366628/1‑139 (MQ=255) cTATGTTAATTTCTTTGCGGTAACGTAATCCGGAACACATTATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGAcgcg > 2:814025/1‑139 (MQ=255) cTATGTTAATTTCTTTGCGGTAACGTAATCCGGAACACATTATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGAcgcg > 2:288056/1‑139 (MQ=255) aTGTTAATTTCTTTGCGGTAACGTAATCCGGAACACATTATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGaa > 2:214904/1‑139 (MQ=255) aTGTTAATTTCTTTGCGGTAACGTAATCCGGAACACATTATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGaa > 1:869956/1‑139 (MQ=255) aTTTCTTTGCGGTAACGTAATCCGGAACACATTATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTAtct > 2:1067591/1‑139 (MQ=255) tttGCGGTAACGTAATCCGGAACACATTATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCg < 1:1122079/139‑1 (MQ=255) tttGCGGTAACGTAATCCGGAACACATTATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCg > 2:197593/1‑139 (MQ=255) tGCGGTAACGTAATGCGGAACACATTATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGTCAATCGCTTTGACTAAAGAAAGGCCTCGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGcc > 1:682593/1‑139 (MQ=255) tGCGGTAACGTAATCCGGAACACATTATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGcc > 1:558283/1‑139 (MQ=255) ggTAACGTAATCCGGAACACATTATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCaaa < 2:806824/139‑1 (MQ=255) tAACGTAATCCGGAACACATTATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAAt < 1:947281/139‑1 (MQ=255) aTCCGGAACACATTATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGa > 2:783746/1‑139 (MQ=255) cGGAACACATTATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAaga < 2:869956/139‑1 (MQ=255) aaCACATTATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGtt > 2:731065/1‑139 (MQ=255) aaCACATTATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGtt > 1:248083/1‑139 (MQ=255) aTTATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCa > 2:338919/1‑139 (MQ=255) tATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCGAAATCTACGGAAGAGTTTTTCAgg < 1:686527/139‑1 (MQ=255) tATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAgg < 1:353038/139‑1 (MQ=255) aTGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGc < 1:814025/139‑1 (MQ=255) ttGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTaa > 2:459343/1‑139 (MQ=255) aGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGcc < 1:900884/99‑1 (MQ=255) aGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGcc > 2:900884/1‑99 (MQ=255) gTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGtt > 1:803890/1‑139 (MQ=255) tGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTc > 1:862393/1‑139 (MQ=255) tGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTc < 2:580692/139‑1 (MQ=255) aTACGTAGCACTTCCCCCATGCAATTCGGCAATCTCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCa > 1:585524/1‑139 (MQ=255) tACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAg > 1:966211/1‑139 (MQ=255) aCGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAgg < 1:926717/139‑1 (MQ=255) cGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAggg < 2:366628/139‑1 (MQ=255) gTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGc > 1:316278/1‑139 (MQ=255) tAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGAcg < 2:622226/73‑1 (MQ=255) tAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGAcg > 1:622226/1‑73 (MQ=255) aGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAaga < 1:729383/104‑1 (MQ=255) aGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAaga > 2:729383/1‑104 (MQ=255) cACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAaga < 1:38621/102‑1 (MQ=255) cACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAaga > 2:38621/1‑102 (MQ=255) cACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGc > 1:383638/1‑139 (MQ=255) cACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGc < 1:1124994/139‑1 (MQ=255) cACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGc > 2:944769/1‑139 (MQ=255) cTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGa > 2:1072521/1‑139 (MQ=255) cccccATGCAATTCGGCAATCTCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGatat < 2:585524/139‑1 (MQ=255) cccccATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTcc > 1:305114/1‑77 (MQ=255) cccccATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTcc < 2:305114/77‑1 (MQ=255) cccccATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCa > 2:339983/1‑83 (MQ=255) cccccATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCa < 1:339983/83‑1 (MQ=255) cccccATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAgg < 1:273696/107‑1 (MQ=255) cccccATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAgg > 2:273696/1‑107 (MQ=255) cccccATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGatat < 1:70950/139‑1 (MQ=255) cccccATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGatat < 1:288056/139‑1 (MQ=255) cccccATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGatat < 2:383638/139‑1 (MQ=255) cccccATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGatat > 2:143693/1‑139 (MQ=255) cccccATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGatat < 2:316278/139‑1 (MQ=255) ccccATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATc < 1:214904/139‑1 (MQ=255) ccccATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATc < 2:149406/139‑1 (MQ=255) ccccATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATc < 1:459343/139‑1 (MQ=255) ccccATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATc < 1:143693/139‑1 (MQ=255) ccATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATc < 2:294313/137‑1 (MQ=255) ccATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATc > 1:294313/1‑137 (MQ=255) aTGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTgatatcgc < 2:503146/134‑8 (MQ=255) aTGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTgatatcgc > 1:503146/1‑127 (MQ=255) tGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAatat > 1:931008/1‑139 (MQ=255) tGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAatat < 2:966211/139‑1 (MQ=255) cAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAAtttt > 2:757701/1‑111 (MQ=255) cAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAAtttt < 1:757701/111‑1 (MQ=255) cAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATc > 1:734550/1‑132 (MQ=255) cAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATc < 2:734550/132‑1 (MQ=255) ttCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTTAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATc < 1:667730/129‑1 (MQ=255) ttCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTTAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATc > 2:667730/1‑129 (MQ=255) ttCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGa < 2:682593/139‑1 (MQ=255) ttCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGa > 2:313543/1‑139 (MQ=255) ttCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGa > 1:1014412/1‑139 (MQ=255) ggCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAg < 2:964533/139‑1 (MQ=255) aaTCGCTTTGACTAAAGAAAGGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTg < 1:313543/139‑1 (MQ=255) agaaagGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGTATCAAGaaaa < 1:783746/139‑1 (MQ=255) aaagGCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGTATCAAGAAAACt < 2:248083/139‑1 (MQ=255) ggCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCa > 1:35535/1‑46 (MQ=255) ggCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCa < 2:35535/46‑1 (MQ=255) ggCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTTAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTaa < 2:793316/111‑1 (MQ=255) ggCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAAtttt < 2:397528/82‑1 (MQ=255) ggCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAAtttt > 1:397528/1‑82 (MQ=255) ggCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGatat > 1:996720/1‑102 (MQ=255) ggCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGatat < 2:996720/102‑1 (MQ=255) ggCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTaa > 1:793316/1‑111 (MQ=255) ggCCTAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGTATCAAGAAAACTGGt > 1:743932/1‑139 (MQ=255) tAGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGTATCAAGAAAACTGGTtata > 1:386355/1‑139 (MQ=255) aGTCCCTGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATc < 2:276223/98‑1 (MQ=255) aGTCCCTGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATc > 1:276223/1‑98 (MQ=255) aGTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGTATCAAGAAAACTGGTTatat > 2:84252/1‑139 (MQ=255) gTCCCCGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGTATCAAGAAAACTGGTTATATg > 1:475210/1‑139 (MQ=255) | TACTGAAGCCCTATGTTAATTTCTTTGCGGTAACGTAATCCGGAACACATTATGCTTATTGAGATAGTGATACGTAGCACTTCCCCCATGCAATTCGGCAATCGCTTTGACTAAAGAAAGGCCTAGTCCCTGACCTACGGAATGACGCGAATTATCTCCCCGCCAAAATCTACGGAAGAGTTTTTCAGGCTCATTAATTTTCGTTCCAGGGCTGGCGATATCAATATTAAGATAGCTGTTGGTATCAAGAAAACTGGTTATATG > NC_000913/2036779‑2037042 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |