Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,052,156	C→T	intergenic (+142/+120)	yeeJ → / ← yeeL	putative adhesin/pseudogene, glycosyltransferase homology

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,052,156	0	C	T	100.0%	313.2 / NA	88	intergenic (+142/+120)	yeeJ/yeeL	putative adhesin/pseudogene, glycosyltransferase homology
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (41/47);  total (41/47)

ATAATTTCTTAAAGAGTGTTCCATTCGGGGCACTCTTTTTTACATTCCCTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATCATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCGTTCATAACAGATCGGCATTACTATGCATAAGTACTGTCTCATATT  >  NC_000913/2052024‑2052282                                                                                                                                     |                                                                                                                               ataATTTCTTAAAGAGTGTTCCATTCGGGGCACTCTTTTTTACATTCCCTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTc                                                                                                                          >  1:703991/1‑139 (MQ=255)  taATTTCTTAAAGAGTGTTCCATTCGGGGCACTCTTTTTTACATTCCCTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCg                                                                                                                         <  1:376513/139‑1 (MQ=255)     tttCTTAAAGAGTGTTCCATTCGGGGCACTCTTTTTTACATTCCCTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTg                                                                                                                      <  1:556243/139‑1 (MQ=255)                 tgtTCCATTCGGGGCACTCTTTTTTACATTCCCTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTg                                                                                                          >  2:1086604/1‑139 (MQ=255)                 tgtTCCATTCGGGGCACTCTTTTTTACATTCCCTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTg                                                                                                          >  2:960350/1‑139 (MQ=255)                   ttCCATTCGGGGCACTCTTTTTTACATTCCCTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTa                                                                                                                  <  2:607413/129‑1 (MQ=255)                   ttCCATTCGGGGCACTCTTTTTTACATTCCCTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTa                                                                                                                  >  1:607413/1‑129 (MQ=255)                   ttCCATTCGGGGCACTCTTTTTTACATTCCCTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCttt                                                                                                           <  2:605371/136‑1 (MQ=255)                   ttCCATTCGGGGCACTCTTTTTTACATTCCCTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCttt                                                                                                           >  1:605371/1‑136 (MQ=255)                           ggggCACTCTTTTTTACATTCCCTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGc                                                                                                >  1:444747/1‑139 (MQ=255)                             ggCACTCTTTTTTACATTCCCTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCg                                                                                                                         <  1:123775/112‑1 (MQ=255)                             ggCACTCTTTTTTACATTCCCTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCg                                                                                                                         >  2:123775/1‑112 (MQ=255)                             ggCACTCTTTTTTACATTCCCTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTAc                                                                                                                 >  1:216304/1‑120 (MQ=255)                             ggCACTCTTTTTTACATTCCCTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTAc                                                                                                                 <  2:216304/120‑1 (MQ=255)                                  tctTTTTTACATTCCCTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGtttt                                                                                         >  1:175280/1‑139 (MQ=255)                                            aTTCCCTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTgatgat                                                                               >  1:347753/1‑139 (MQ=255)                                            aTTCCCTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTgatgat                                                                               >  2:60411/1‑139 (MQ=255)                                              tCCCTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTg                                                                             >  1:634798/1‑139 (MQ=255)                                               cccTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGa                                                                            <  1:198562/139‑1 (MQ=255)                                                ccTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGAc                                                                           <  1:960350/139‑1 (MQ=255)                                                ccTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGAc                                                                           >  2:48391/1‑139 (MQ=255)                                                ccTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGAc                                                                           <  2:99637/139‑1 (MQ=255)                                                ccTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGAc                                                                           <  2:934327/139‑1 (MQ=255)                                                ccTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGAc                                                                           <  2:703991/139‑1 (MQ=255)                                                   ctACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAg                                                                        >  2:369958/1‑139 (MQ=255)                                                   ctACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAg                                                                        >  2:143850/1‑139 (MQ=255)                                                   ctACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAg                                                                        <  1:98453/139‑1 (MQ=255)                                                        gAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGAc                                                                           >  1:476194/1‑131 (MQ=255)                                                        gAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGAc                                                                           <  2:476194/131‑1 (MQ=255)                                                        gAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCa                                                                   >  2:39053/1‑139 (MQ=255)                                                        gAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCa                                                                   <  1:592309/139‑1 (MQ=255)                                                         aaCTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCag                                                                  >  1:1022996/1‑139 (MQ=255)                                                          aCTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTCTGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGATTTTCTGTGATGATTGACCAGCCTCaga                                                                 <  1:696723/139‑1 (MQ=255)                                                          aCTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGttt                                                                                          >  2:1098969/1‑114 (MQ=255)                                                          aCTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGttt                                                                                          <  1:1098969/114‑1 (MQ=255)                                                          aCTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGAc                                                                           <  2:382196/129‑1 (MQ=255)                                                          aCTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGAc                                                                           >  1:382196/1‑129 (MQ=255)                                                          aCTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCt                                                                     <  2:192480/135‑1 (MQ=255)                                                          aCTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCt                                                                     >  1:192480/1‑135 (MQ=255)                                                            tAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGt                                                               >  2:583388/1‑139 (MQ=255)                                                              gCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGt                                                                                                                       >  1:637034/1‑81 (MQ=255)                                                              gCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGt                                                                                                                       <  2:637034/81‑1 (MQ=255)                                                              gCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTg                                                                                              >  2:682957/1‑106 (MQ=255)                                                              gCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCaga                                                                 >  2:694828/1‑135 (MQ=255)                                                              gCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGCTTTTCTGTGATGATTGACCAGCCTCaga                                                                 <  1:694828/135‑1 (MQ=255)                                                              gCCCTTATCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTg                                                                                              <  1:682957/106‑1 (MQ=255)                                                               cccTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTAtt                                                            <  1:793613/139‑1 (MQ=255)                                                                   tctctcACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACGAGCCTCAGAGTATtgatg                                                        >  2:322369/1‑139 (MQ=255)                                                                   tctctcACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCaga                                                                 >  2:569329/1‑130 (MQ=255)                                                                   tctctcACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCaga                                                                 <  1:569329/130‑1 (MQ=255)                                                                   tctctcACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATtgatg                                                        >  1:943597/1‑139 (MQ=255)                                                                   tctctcACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATtgatg                                                        >  1:782374/1‑139 (MQ=255)                                                                   tctctcACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATtgatg                                                        >  1:437497/1‑139 (MQ=255)                                                                    ctcgcACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTTGTTTTCTGTGATGATTGACCAGCCTCAGAGTATtgatga                                                       <  1:322369/139‑1 (MQ=255)                                                                         acaGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGAcacca                                                  <  2:943597/139‑1 (MQ=255)                                                                         acaGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGAcacca                                                  <  1:143850/139‑1 (MQ=255)                                                                         acaGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGAcacca                                                  <  1:869780/139‑1 (MQ=255)                                                                         acaGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGAcacca                                                  <  2:622099/139‑1 (MQ=255)                                                                           aGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACaccacc                                                >  1:1113470/1‑139 (MQ=255)                                                                            gAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCt                                                                     <  2:776993/117‑1 (MQ=255)                                                                            gAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCt                                                                     >  1:776993/1‑117 (MQ=255)                                                                            gAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCg                                               <  1:40794/139‑1 (MQ=255)                                                                              aaaTGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCGtt                                             <  1:107349/139‑1 (MQ=255)                                                                                 tGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCGTTCAt                                          >  2:1103588/1‑139 (MQ=255)                                                                                   aataaataAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCGTTCATaa                                        >  2:1022716/1‑139 (MQ=255)                                                                                     taaataaaAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGTTGATTGACAAGCCTCAGAGTATTGATGACACCACCGTTCATAACa                                      >  2:136063/1‑139 (MQ=255)                                                                                       aataaaAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCg                                                                                                                         >  1:833128/1‑54 (MQ=255)                                                                                       aataaaAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCg                                                                                                                         <  2:833128/54‑1 (MQ=255)                                                                                       aataaaAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGAcacca                                                  <  2:240781/125‑1 (MQ=255)                                                                                       aataaaAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGAcacca                                                  >  1:240781/1‑125 (MQ=255)                                                                                       aataaaAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCGTTCATAACAGa                                    >  1:473018/1‑139 (MQ=255)                                                                                             aaTGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCGTTCATAACAGATCGGCa                              <  1:39053/139‑1 (MQ=255)                                                                                             aaTGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCGTTCATAACAGATCGGCa                              <  2:473018/139‑1 (MQ=255)                                                                                                gCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCGTTCATAACAGATCGGCATTa                           <  1:136063/139‑1 (MQ=255)                                                                                                 cGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCGTTCATAACAGATCGGCATTAc                          >  2:855969/1‑139 (MQ=255)                                                                                                 cGGCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCGTTCATAACAGATCGGCATTAc                          <  1:48391/139‑1 (MQ=255)                                                                                                   gCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCGTTCATAACAGATCGGCATTACTa                        <  2:1037748/139‑1 (MQ=255)                                                                                                   gCACCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCGTTCATAACAGATCGGCATTACTa                        <  1:594360/139‑1 (MQ=255)                                                                                                     aCCGCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCGTTCATAACAGATCGGCATTACTATg                      <  2:634798/139‑1 (MQ=255)                                                                                                        gCCAGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCGTTCATAACAGATCGGCATTACTATGCAt                   <  2:175280/139‑1 (MQ=255)                                                                                                           aGAATCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCGTTCATAACAGATCGGCATTACTATGCATAAg                <  2:782374/139‑1 (MQ=255)                                                                                                             aaTCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCGTTCATAACAGATCGGCATTACTATGCATAAGTa              <  2:1022996/139‑1 (MQ=255)                                                                                                             aaTCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCGTTCATAACAGATCGGCATTACTATGCATAAGTa              <  1:583388/139‑1 (MQ=255)                                                                                                               tCGCGTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCGTTCATAACAGATCGGCATTACTATGCATAAGTACt            <  1:1103588/139‑1 (MQ=255)                                                                                                                 gcgTTCGATGTGACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCGTTCATAACAGATCGGCATTACTATGCATAAGTACTGt          >  1:318689/1‑139 (MQ=255)                                                                                                                         tgtgACTATGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCGTTCATAACAGATCGGCATTACTATGCATAAGTACTGTCTCATAtt  <  2:437497/139‑1 (MQ=255)                                                                                                                                 tGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCGTTCATAACAGATCGGCATTACTATGCATAAGTACt            >  1:444719/1‑121 (MQ=255)                                                                                                                                 tGATTATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCGTTCATAACAGATCGGCATTACTATGCATAAGTACt            <  2:444719/121‑1 (MQ=255)                                                                                                                                     |                                                                                                                               ATAATTTCTTAAAGAGTGTTCCATTCGGGGCACTCTTTTTTACATTCCCTCTACAGAACTAGCCCTTCTCTCACAGAAAATGAATAAATAAAAATGCGGCACCGCCAGAATCGCGTTCGATGTGACTATGATCATTTTCGGTGAGTACTGCTTTGATCTAAAGGCTGGTTTTCTGTGATGATTGACCAGCCTCAGAGTATTGATGACACCACCGTTCATAACAGATCGGCATTACTATGCATAAGTACTGTCTCATATT  >  NC_000913/2052024‑2052282

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑