| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,334,893 | A→G | intergenic (+64/‑231) | cysB → / → ymiA | N‑acetylserine‑responsive cysteine regulon transcriptional activator, autorepressor/uncharacterized protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,334,893 | 0 | A | G | 100.0% | 129.3 / NA | 35 | intergenic (+64/‑231) | cysB/ymiA | N‑acetylserine‑responsive cysteine regulon transcriptional activator, autorepressor/uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (17/18); total (17/18) | |||||||||||
TGCGGCTGTCGCATTGCGCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTACTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATT > NC_000913/1334757‑1335025 | tGCGGCTGTCGCATTGCGCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCt < 2:1170144/139‑1 (MQ=255)tGCGGCTGTCGCATTGCGCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCt > 2:251791/1‑139 (MQ=255)tGCGGCTGTCGCATTGCGCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCt < 1:684969/139‑1 (MQ=255) gCTGTCGCATTGCGCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCTTAtt > 2:509628/1‑139 (MQ=255) gTCGCATTGCGCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCTTATTTCt < 2:402121/139‑1 (MQ=255) ctctAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCTTATTTCTATACCGTGcac < 1:509628/139‑1 (MQ=255) tGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCTTATTTCTATACCGTGCACAATAtt > 1:269209/1‑139 (MQ=255) aTTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCt > 1:506873/1‑108 (MQ=255) aTTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCTTATTTCTATACCGTGCACAATATTTTTATcc < 1:301591/139‑1 (MQ=255) aTTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCTTATTTCTATACCGTGCACAATATTTTTATcc > 1:519397/1‑139 (MQ=255) tGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCTTATTTCTATACCGTGCACAATATTTTTATCCCt < 2:857068/139‑1 (MQ=255) ggTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCTTATTTCTATACCGTGCACAATATTTTTATCCCTCat > 2:942530/1‑139 (MQ=255) ataAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAAtt < 1:251791/139‑1 (MQ=255) taAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCTTATTTCTATACCGTGCACAATATTTTTATCCCTCat > 1:174041/1‑122 (MQ=255) taAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCTTATTTCTATACCGTGCACAATATTTTTATCCCTCat < 2:174041/122‑1 (MQ=255) ccGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCt < 1:342988/78‑1 (MQ=255) ccGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCt > 1:522965/1‑78 (MQ=255) ccGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCt < 2:522965/78‑1 (MQ=255) ccGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCt > 2:342988/1‑78 (MQ=255) ccGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTaaa > 1:1154492/1‑139 (MQ=255) gCGTTATTTTCGGCACCTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCg < 2:519397/139‑1 (MQ=255) cTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCt > 2:202179/1‑44 (MQ=255) cTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCt > 1:632447/1‑44 (MQ=255) cTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCt < 2:632447/44‑1 (MQ=255) tttATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGttt > 1:296607/1‑139 (MQ=255) tGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTGCTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCag < 2:468390/139‑2 (MQ=255) gCGAAGGTGCCGGAATATATTCTCTTTTGTTGCTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAag > 2:480482/1‑96 (MQ=255) gCGAAGGTGCCGGAATATATTCTCTTTTGTTGCTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAag < 1:480482/96‑1 (MQ=255) gCGAAGGTGCCGGAATATATTCTCTTTTGTTGCTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAatat > 1:1134240/1‑139 (MQ=255) aaGGTGCCGGAATATATTCTCTTTTGTTGCTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAagtagt < 2:208580/97‑1 (MQ=255) aaGGTGCCGGAATATATTCTCTTTTGTTGCTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAagtagt > 1:208580/1‑97 (MQ=255) aaGGTGCCGGAATATATTCTCTTTTGTTGCTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAagta < 1:805967/95‑1 (MQ=255) aaGGTGCCGGAATATATTCTCTTTTGTTGCTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAagta > 2:805967/1‑95 (MQ=255) ctTTTGTTGCTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGaa < 2:296607/139‑1 (MQ=255) tttGTTGCTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAatt < 2:1134240/139‑1 (MQ=255) | TGCGGCTGTCGCATTGCGCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTTTATGTAGCGAAGGTGCCGGAATATATTCTCTTTTGTTACTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATT > NC_000913/1334757‑1335025 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |