Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,933,613 T→C T26A (ACA→GCA)  fucA ← L‑fuculose‑1‑phosphate aldolase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,933,6130TC100.0% 218.0 / NA 59T26A (ACA→GCA) fucAL‑fuculose‑1‑phosphate aldolase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (28/31);  total (28/31)

AGCTTTCCTTCCTCATGTTTACCGTTGCCATCAATAAAGACAATATGCGACTCCGTCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGTCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTCCATTAGCTACCTCTCTCTGATTCAAAACAGGGCAATAATGTTGTTCCTTTCACACTAT  >  NC_000913/2933483‑2933743
                                                                                                                                  |                                                                                                                                  
aGCTTTCCTTCCTCATGTTTACCGTTGCCATCAATAAAGACAATATGCGACTCCGTCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGt                                                                                                                            >  1:1056820/1‑139 (MQ=255)
 gCTTTCCTTCCTCATGTTTACCGTTGCCATCAATAAAGACAATATGCGACTCCGTCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCTATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGtt                                                                                                                           <  2:769317/139‑1 (MQ=255)
                   tACCGTTGCCATCAATAAAGACAATATGCGACTCCGTCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCAt                                                                                                         <  1:594176/139‑1 (MQ=255)
                        ttGCCATCAATAAAGACAATATGCGACTCCGTCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCa                                                                                                    >  1:1178622/1‑139 (MQ=255)
                          gCCATCAATAAAGACAATATGCGACTCCGTCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAgg                                                                                                  <  2:349760/139‑1 (MQ=255)
                          gCCATCAATAAAGACAATATGCGACTCCGTCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAgg                                                                                                  >  1:951660/1‑139 (MQ=255)
                             aTCAATAAAGACAATATGCGACTCCGTCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCaa                                                                                               <  2:1178622/139‑1 (MQ=255)
                             aTCAATAAAGACAATATGCGACTCCGTCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCaa                                                                                               <  1:440316/139‑1 (MQ=255)
                             aTCAACAAAGACAATATGCGACTCCGTCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCaa                                                                                               <  2:733218/139‑1 (MQ=255)
                              tCAATAAAGACAATATGCGACTCCGTCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAg                                                                                              <  2:320371/139‑1 (MQ=255)
                                          atatGCGACTCCGTCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCcccc                                                                                                                                <  2:398705/93‑1 (MQ=255)
                                          atatGCGACTCCGTCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCcccc                                                                                                                                >  1:398705/1‑93 (MQ=255)
                                          atatGCGACTCCGTCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCt                                                                                  >  2:355599/1‑139 (MQ=255)
                                                gACTCCGTCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAg                                                                            <  2:774357/139‑1 (MQ=255)
                                                 aCTCCGTCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAgtgt                                                                                           >  1:1035349/1‑123 (MQ=255)
                                                 aCTCCGTCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAgtgt                                                                                           <  2:1035349/123‑1 (MQ=255)
                                                 aCTCCGTCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGc                                                                           >  1:527105/1‑139 (MQ=255)
                                                    ccGTCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAg                                                                            >  2:90826/1‑135 (MQ=255)
                                                    ccGTCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAg                                                                            <  1:90826/135‑1 (MQ=255)
                                                     cGTCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTc                                                                                                           <  1:148304/103‑1 (MQ=255)
                                                     cGTCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTc                                                                                                           >  2:148304/1‑103 (MQ=255)
                                                       tCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGttt                                                                     >  1:50768/1‑139 (MQ=255)
                                                       tCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGttt                                                                     >  2:888586/1‑139 (MQ=255)
                                                              ttCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGt                                                              >  2:36729/1‑139 (MQ=255)
                                                                      gAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTCCATTAg                                                      <  1:355599/139‑1 (MQ=255)
                                                                       aaTGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTCCATTAGc                                                     >  1:947042/1‑139 (MQ=255)
                                                                        aTGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAgg                                                                                                                 <  2:290005/78‑1 (MQ=255)
                                                                        aTGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAgg                                                                                                                 >  1:290005/1‑78 (MQ=255)
                                                                         tGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTCCATTAGCTa                                                   <  2:50768/139‑1 (MQ=255)
                                                                               tAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACTAGCAAGTTTATTTCGt                                                              >  1:727228/1‑122 (MQ=255)
                                                                               tAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACTAGCAAGTTTATTTCGt                                                              <  2:727228/122‑1 (MQ=255)
                                                                                      aaTCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTCCATTAGCTACCTCTCTCTGAtt                                      >  2:381458/1‑139 (MQ=255)
                                                                                       aTCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCg                                                               >  1:457803/1‑113 (MQ=255)
                                                                                       aTCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCg                                                               <  2:457803/113‑1 (MQ=255)
                                                                                            catcccatccTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGt                                                                                                            <  1:333631/63‑1 (MQ=255)
                                                                                            catcccatccTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGt                                                                                                            >  2:333631/1‑63 (MQ=255)
                                                                                             atcccatccTGATAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTCCATTAGCTACCTCTCTCTGATTCAAAACa                               <  1:379396/139‑1 (MQ=255)
                                                                                                        aTAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTc                                                            <  1:233571/99‑1 (MQ=255)
                                                                                                        aTAACGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTc                                                            >  2:233571/1‑99 (MQ=255)
                                                                                                            cGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAg                                                                            >  1:1118184/1‑79 (MQ=255)
                                                                                                            cGTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAg                                                                            <  2:1118184/79‑1 (MQ=255)
                                                                                                             gTACACTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTCCATTAGCTACCTCTCTCTGATTCAAAACAGGGCAATAATgttgtt               <  2:951660/139‑1 (MQ=255)
                                                                                                               acacTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTCCATTAGCTACCTCTCTCTGATTCAAAACAGGGCAATAATGTTGTTcc             >  1:342624/1‑139 (MQ=255)
                                                                                                                cacTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGCCGAGCAAGTTTATTTCGTTCCATTAGCTACCTCTCTCTGATTCaaaa                                 >  2:1041731/1‑118 (MQ=255)
                                                                                                                cacTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTCCATTAGCTACCTCTCTCTGATTCaaaa                                 <  1:1041731/118‑1 (MQ=255)
                                                                                                                 acTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTCCATTAGCTACCTCTCTCTGATTCAAAACAGGGCAATAATGTTGTTCCtt           <  2:947042/139‑1 (MQ=255)
                                                                                                                  cTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTCCATTAGCTACctctctc                                           <  2:567080/106‑1 (MQ=255)
                                                                                                                  cTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTCCATTAGCTACctctctc                                           >  1:567080/1‑106 (MQ=255)
                                                                                                                  cTGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTCCATTAGCTACCTCTCTCTGATTCAAAACAGGGCAATAATGTTGTTCCttt          <  1:1114738/139‑1 (MQ=255)
                                                                                                                   tGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTCCATTAGCTAcc                                                 >  1:1173376/1‑99 (MQ=255)
                                                                                                                   tGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTCCATTAGCTAcc                                                 <  2:1173376/99‑1 (MQ=255)
                                                                                                                   tGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTCCATTAGCTACctctctc                                           <  2:351530/105‑1 (MQ=255)
                                                                                                                   tGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTCCATTAGCTACctctctc                                           >  1:351530/1‑105 (MQ=255)
                                                                                                                   tGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTCCATTAGCTACCTCTCTCTGATTCAAAACAGGGCaa                         >  2:520983/1‑123 (MQ=255)
                                                                                                                   tGACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTCCATTAGCTACCTCTCTCTGATTCAAAACAGGGCaa                         <  1:520983/123‑1 (MQ=255)
                                                                                                                    gACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTCCATTAGCTACCTCTCTCTGATTCAAAACAGGGCAATAATGTTGTTCCTTTca        <  2:527105/139‑1 (MQ=255)
                                                                                                                    gACGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTCCATTAGCTACCTCTCTCTGATTCAAAACAGGGCAATAATGTTGTTCCTTTca        <  2:342624/139‑1 (MQ=255)
                                                                                                                     aCGTTCCCCGCTGCCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTCCATTAGCTACCTCTCTCTGATTCAAAACAGGGCAATAATGTTGTTCCTTTcac       >  1:650574/1‑139 (MQ=255)
                                                                                                                          ccccGCTGCCCCCTGGTTCAGTCCGAGGCGGGGCATTTCCAGGCAAGTGTCACTAATCTGACGAGCAAGTTTATTTCGTTCCATTAGCTACCTCTCTCTGAGTCAAAACAGGGCAATAATGTTGTTCCTTTCACACTAt  >  1:798021/1‑139 (MQ=255)
                                                                                                                                  |                                                                                                                                  
AGCTTTCCTTCCTCATGTTTACCGTTGCCATCAATAAAGACAATATGCGACTCCGTCAGTTTTTCATATGGAATGCCTGTAGGCGTAATCAGCATCCCATCCTGATAACGTACACTGACGTTCCCCGCTGTCCCCTGGTTCAGTCCCAGGCGGGTCATTTCCAGGCAAGTGTCAATAATCTGACGAGCAAGTTTATTTCGTTCCATTAGCTACCTCTCTCTGATTCAAAACAGGGCAATAATGTTGTTCCTTTCACACTAT  >  NC_000913/2933483‑2933743

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑