Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 3,138,483 | T→C | T14A (ACA→GCA) | gss ← | glutathionylspermidine amidase and glutathionylspermidine synthetase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,138,483 | 0 | T | C | 100.0% | 276.8 / NA | 72 | T14A (ACA→GCA) | gss | glutathionylspermidine amidase and glutathionylspermidine synthetase |
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (36/36); total (36/36) |
GTGGCCCATATATTCGTCGTCGATATAGCTACGGAATACGGCGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGTCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGTAATTGTTGTGCTCTGATTACCTGCTCAGCGACATTAACCGGACAGAGGTCAGAC > NC_000913/3138358‑3138614 | gtgGCCCATATATTCGTCGTCGATATAGCTACGGAATACGGCGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGT‑ATCTGGAGAGTAGATTGCTACCCCACCTGGGGGGTTGCCCCATAATGCCCCGAACAGGGCAt > 1:898221/1‑139 (MQ=255) gCCCATATATTCGTCGTCGATATAGCTACGGAATACGGCGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATcc > 2:720472/1‑139 (MQ=255) cccATATATTCGTCGTCGATATAGCTACGGAATACGGCGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGaa < 2:477925/128‑1 (MQ=255) cccATATATTCGTCGTCGATATAGCTACGGAATACGGCGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGaa > 1:477925/1‑128 (MQ=255) tatatTCGTCGTCGATATAGCTACGGAATACGGCGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCctggct > 1:950850/1‑139 (MQ=255) tcgtcgtcgATATAGCTACGGAATACGGCGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCg < 2:105120/139‑1 (MQ=255) aGCTACGGAATACGGCGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCtcat < 2:950850/139‑1 (MQ=255) aCGGAATACGGCGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACt < 1:654577/139‑1 (MQ=255) aCGGAATACGGCGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACt < 2:904667/139‑1 (MQ=255) cGGAATACGGCGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGaa > 1:115321/1‑101 (MQ=255) cGGAATACGGCGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGaa < 2:115321/101‑1 (MQ=255) ggAATACGGCGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACttt > 1:587271/1‑139 (MQ=255) ggAATACGGCGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACttt > 2:1034408/1‑139 (MQ=255) gAATACGGCGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTa > 2:714137/1‑139 (MQ=255) aTACGGCGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTAcc < 1:270805/139‑1 (MQ=255) tACGGCGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGa > 1:913557/1‑95 (MQ=255) tACGGCGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGa < 2:913557/95‑1 (MQ=255) ggCGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTa > 1:590175/1‑139 (MQ=255) gCGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTaa < 2:596754/139‑1 (MQ=255) cGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGt < 2:629748/109‑1 (MQ=255) cGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGt > 1:629748/1‑109 (MQ=255) cGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTg > 1:49898/1‑119 (MQ=255) cGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTg < 2:49898/119‑1 (MQ=255) tCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCt > 2:810380/1‑119 (MQ=255) tCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCt < 1:810380/119‑1 (MQ=255) aTCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATa < 1:714137/139‑1 (MQ=255) tCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATAc < 1:1034408/139‑1 (MQ=255) tGCGGATCGAGAGAACTATAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGt > 2:438901/1‑139 (MQ=255) gCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGtt < 1:210082/139‑1 (MQ=255) cGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATAc > 2:647865/1‑125 (MQ=255) cGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATAc < 1:647865/125‑1 (MQ=255) cGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCt > 1:2344/1‑130 (MQ=255) cGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCt < 2:2344/130‑1 (MQ=255) cGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTg > 1:902035/1‑139 (MQ=255) cGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTg > 1:777329/1‑139 (MQ=255) cGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTg > 2:967979/1‑139 (MQ=255) ggATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTgg < 2:161799/139‑1 (MQ=255) tCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGt < 2:777329/139‑1 (MQ=255) cGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGTa > 2:56568/1‑139 (MQ=255) aaCTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGTAAttgtt < 1:1028768/139‑1 (MQ=255) aaCTATAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGTAAttgtt < 1:438901/139‑1 (MQ=255) cTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGTAATtgttgt > 1:263066/1‑139 (MQ=255) tGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCTTCACTTTACCTTTAACAAt > 1:807519/1‑109 (MQ=255) tGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAAt < 2:807519/109‑1 (MQ=255) tGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGTAATTGTtgtg < 2:902035/139‑1 (MQ=255) tGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGTAATTGTtgtg < 1:967979/139‑1 (MQ=255) aaTCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCtcat < 1:629976/88‑1 (MQ=255) aaTCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCtcat > 2:629976/1‑88 (MQ=255) agagTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGTAATTGTTGTGCTCTGATTAc < 2:898221/139‑1 (MQ=255) agagTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGTAATTGTTGTGCTCTGATTAc > 2:547691/1‑139 (MQ=255) agTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGTAATTGTTGTGCTCTGATTACCt > 2:636377/1‑139 (MQ=255) tACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGTAATTGTtgtg > 2:959383/1‑117 (MQ=255) tACCCCACCTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGTAATTGTtgtg < 1:959383/117‑1 (MQ=255) ccccACCTGGGGCGTTGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACGACCTAAGCAGTTGGCGTAATTGTTGTGCTCTGATTACCTGCTCAGCGACAt > 1:786359/1‑139 (MQ=255) ccTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTa > 2:971450/1‑75 (MQ=255) ccTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTa < 1:971450/75‑1 (MQ=255) ccTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAAc > 2:485797/1‑77 (MQ=255) ccTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAAc < 1:485797/77‑1 (MQ=255) ccTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGTAATTGTtgtg > 2:1070049/1‑110 (MQ=255) ccTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGTAATTGTtgtg < 1:1070049/110‑1 (MQ=255) ccTGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGTAATTGTTGTGCTCTGATTACCTGCTCAGCGACATTAAcc < 1:547691/139‑1 (MQ=255) tGGGGCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGTAATTGTTGTGCTCTGATTACCTGCTCAGCGACATTAACCgg > 2:432555/1‑139 (MQ=255) ggCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAg > 2:1152437/1‑85 (MQ=255) ggCGTAGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAg < 1:1152437/85‑1 (MQ=255) aGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGTAAttgtt > 2:1041427/1‑97 (MQ=255) aGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGTAAttgtt < 1:1041427/97‑1 (MQ=255) aGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGTAATTGTtgtg > 1:975618/1‑100 (MQ=255) aGCCCAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGTAATTGTtgtg < 2:975618/100‑1 (MQ=255) ccAATAATGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGTAATTGTTGTGCTCTGATTACCTGCTCAGCGACATTAACCGGACAGAGGTCAg < 1:720472/139‑1 (MQ=255) aataatGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACtt < 1:40654/52‑1 (MQ=255) aataatGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACtt > 2:40654/1‑52 (MQ=255) aataatGCCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGTAATTGTTGTGCTCTGATTACCTGCTCAGCGACATTAACCGGACAGAGGTCAGAc > 2:892059/1‑139 (MQ=255) | GTGGCCCATATATTCGTCGTCGATATAGCTACGGAATACGGCGTCATCTTCGTATTCCTGCGGATCGAGAGAACTGTAATCTGAAGAGTAGATTGCTACCCCACCTGGGGCGTAGCCCAATAATGTCCCGAACGGGGCATCCTGGCTGGTCGTTCCTTTGCTCATCACTTTACCTTTAACAATACAACCTAAGCAGTTGGCGTAATTGTTGTGCTCTGATTACCTGCTCAGCGACATTAACCGGACAGAGGTCAGAC > NC_000913/3138358‑3138614 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |