| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,708,192 | T→C | V425A (GTT→GCT) | rsxC → | SoxR iron‑sulfur cluster reduction factor component, putative membrane‑associated NADH oxidoreductase of electron transport complex |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,708,192 | 0 | T | C | 100.0% | 100.8 / NA | 27 | V425A (GTT→GCT) | rsxC | SoxR iron‑sulfur cluster reduction factor component, putative membrane‑associated NADH oxidoreductase of electron transport complex |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (18/9); total (18/9) | |||||||||||
GCGCCTGTGCTGACGCCTGCCCTGCGGATCTTTTGCCGCAACAGTTGTACTGGTTCAGCAAAGGTCAGCAACACGATAAAGCTACCACGCATAACATTGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGTTTGCCCGAGCAATATTCCCCTGGTGCAATATTTCCGTCAGGAAAAAGCTGAAATTGCGGCTATTCGTCAGGAAGAAAAGCGCGCCGCAGAAGCCAAAGCGCGTTTCGAAGCGCGCCAGGCTCGTCTGG > NC_000913/1708060‑1708320 | gcgcCTGTGCTGACGCCTGCCCTGCGGATCTTTTGCCGTAACAGTTGTACTGGTTCAGCAAAGGTCAGCAACACGATAAGGCTACCACGCATAACATTGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGCTTGccc < 1:1084072/139‑1 (MQ=255)gcgcCTGTGCTGACGCCTGCCCTGCGGATCTTTTGCCGCAACAGTTGTACTGGTTCAGCAAAGGTCAGCAACACGATAAAGCTACCACGCATAACATTGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGCTTGccc < 2:730641/139‑1 (MQ=255) gcCTGTGCTGACGCCTGCCCTGCGGATCTTTTGCCGCAACAGTTGTACTGGTTCAGCAAAGGTCAGCAACACGATAAAGCTACCACGCATAACATTGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGCTTGCCCGa < 1:263653/139‑1 (MQ=255) ccTGTGCTGACGCCTGCCCTGCGGATCTTTTGCCGCAACAGTTGTACTGGTTCAGCAAAGGTCAGCAACACGATAAAGCTACCACGCATAACATTGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGCTTGCCCGAg < 2:359728/139‑1 (MQ=255) cTGTGCTGACGCCTGCCCTGCGGATCTTTTGCCGCAACAGTTGTACTGGTTCAGCAAAGGTCAGCAACACGATAAAGCTACCACGCATAACATTGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGCTTGCCCGAGc < 2:756650/139‑1 (MQ=255) gtgCTGACGCCTGCCCTGCGGATCTTTTGCCGCAACAGTTGTACTGGTTCAGCAAAGGTCAGCAACACGATAAAGCTACCACGCATAACATTGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGCTTGCCCGAGCaa > 1:118588/1‑139 (MQ=255) gCCGCAACAGTTGTACTGGTTCAGCAAAGGTCAGCAACACGATAAAGCTACCACGCATAACATTGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGCTTGCCCGAGCAATATTCCCCTGGTGCAATATTTCCGTCAg > 2:935294/1‑139 (MQ=255) gTTGTACTGGTTCAGCAAAGGTCAGCAACACGATAAAGCTACCACGCATAACATTGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGCTTGCCCGAGCAATATTCCCCTGGTGCAATATTTCCGTCAGGAAAAAGCt < 1:935294/139‑1 (MQ=255) gTTCAGCATAGGTCAGCAACACGATAAAGCTACCACGGATAACGTTGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGCTTGCCCGAGCAATATTCGCCTGGTGCAATATTTCCGTCAGGAAAAAGCTGAAATTGCg > 2:741789/1‑139 (MQ=255) gTTCAGCAAAGGTCAGCAACACGATAAAGCTACCACGCATAACATTGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGCTTGCCCGAGCAATATTcccc < 1:214989/101‑1 (MQ=255) gTTCAGCAAAGGTCAGCAACACGATAAAGCTACCACGCATAACATTGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGCTTGCCCGAGCAATATTcccc > 2:214989/1‑101 (MQ=255) gTCAGCAACACGATAAAGCTACCACGCATAACATTGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGCTTGCCCGAGCAATATTCCCCTGGTGCAATATTTCCGTCAGGAAAAAGCTGAAATTGCGGCTATTCGTCa > 1:377143/1‑139 (MQ=255) cGATAAAGCTACCACGCATAACATTGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGCTTGCCCGAGCAATATTCCCCTGGTGCAATATTTCCGTCAGGAAAAAGCTGAAATTGCGGCTATTCGTCAGGAAGAAAAg > 2:341811/1‑139 (MQ=255) ccACGCATAACATTGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGCTTGCCCGAGCAata > 1:710921/1‑63 (MQ=255) ccACGCATAACATTGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGCTTGCCCGAGCAata < 2:710921/63‑1 (MQ=255) ccACGCATAACATTGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGCTTGCCCGAGCAATATTCCCCTGGTGCAATATTTCCGTCAGGAAAAAGCTGAAATTGCGGCTATTCGTCAGGAAGAAAAGCGCGCCGCAGa > 2:73549/1‑139 (MQ=255) ccACGCATAACATTGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGCTTGCCCGAGCAATATTCCCCTGGTGCAATATTTCCGTCAGGAAAAAGCTGAAATTGCGGCTATTCGTCAGGAAGAAAAGCGCGCCGCAGa > 1:248000/1‑139 (MQ=255) cATAACATTGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGCTTGCCCGAGCAATATTCCCCTGGTGCAATATTTCCGTCAGGAAAAAGCTGAAATTGCGGCTATTCGTCAGGAAGAAAAGCGCGCCGCAGAAGCCa > 1:39584/1‑139 (MQ=255) tAACATTGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGCTTGCCCGAGCAATATTCCCCTGGTGCAATATTTCCGTCAGGAAAAAGCTGAAATTGCGGCTATTCGTCAGGAAGAAAAGCGCGCCGCAGAAGCCaaa > 2:484192/1‑139 (MQ=255) tGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGCTTGCCCGAGCAATATTCCCCTGGTGCAATATTTCCGTCAGGAAAAAGCTGAAATTGCGGCTATTCGTCAGGAAGAAAAGCGCGCCGCAGAAGCCAAAGCGCGt > 2:638280/1‑139 (MQ=255) tGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGCTTGCCCGAGCAATATTCCCCTGGTGCAATATTTCCGTCAGGAAAAAGCTGAAATTGCGGCTATTCGTCAGGAAGAAAAGCGCGCCGCAGAAGCCAAAGCGCGt > 2:803650/1‑139 (MQ=255) cTGATTGCATTGAATGTGGGGCTTGCGCGTGGGCTTGCCCGAGCAATATTCCCCTGGTGCAATATTTCCGTCAGGAAAAAGCTGAAATTGCGGCTATTCGTCAGGAAGAAAAGCGCGCCGCAGAAGCCAAAGCGCGttt > 2:1073289/1‑139 (MQ=255) tgtgGGGCTTGCGCGTGGGCTTGCCCGAGCAATATTCCCCTGGTGCAATATTTCCGTCAGGAAAAAGCTGAAATTGCGGCTATTCGTCAGGAAGAAAAGCGCGCCGCAGAAGCCAAAGCGCGTTTCGAAGCGCGCCAgg < 2:118588/139‑1 (MQ=255) ttGCGCGTGGGCTTGCCCGAGCAATATTCCCCTGGTGCAATATTTCCGTCAGGAAAAAGCTGAAATTGCGGCTATTCGTCAGGAAGAAAAGCGCGCCGCAGAAGCCAAAGCGCGTTTCGAAGCGCGCCAGGCTCGTCTg > 2:576670/1‑139 (MQ=255) ttGCGCGTGGGCTTGCCCGAGCAATATTCCCCTGGTGCAATATTTCCGTCAGGAAAAAGCTGAAATTGCGGCTATTCGTCAGGAAGAAAAGCGCGCCGCAGAAGCCAAAGCGCGTTTCGAAGCGCGCCAGGCTCGTCTg > 2:216874/1‑139 (MQ=255) ttGCGCGTGGGCTTGCCCGAGCAATATTCCCCTGGTGCAATATTTCCGTCAGGAAAAAGCTGAAATTGCGGCTATTCGTCAGGAAGAAAAGCGCGCCGCAGAAGCCAAAGCGCGTTTCGAAGCGCGCCAGGCTCGTCTg > 1:420613/1‑139 (MQ=255) ttGCGCGTGGGCTTGCCCGAGCAATATTCCCCTGGTGCAATATTTCCGTCAGGAAAAAGCTGAAATTGCGGCTATTCGTCAGGAAG‑AAAGCGCGCCGCAGAAGCCAAAGCGCGTTTCGAAGCGCGCCAGGCTCGTCTgg > 2:923350/1‑139 (MQ=255) | GCGCCTGTGCTGACGCCTGCCCTGCGGATCTTTTGCCGCAACAGTTGTACTGGTTCAGCAAAGGTCAGCAACACGATAAAGCTACCACGCATAACATTGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGTTTGCCCGAGCAATATTCCCCTGGTGCAATATTTCCGTCAGGAAAAAGCTGAAATTGCGGCTATTCGTCAGGAAGAAAAGCGCGCCGCAGAAGCCAAAGCGCGTTTCGAAGCGCGCCAGGCTCGTCTGG > NC_000913/1708060‑1708320 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |