| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4267359 | 55 (0.920) | 4 (0.070) | 4/216 | 5.3 | 7.0% | coding (246/1194 nt) | tyrB | tyrosine aminotransferase, tyrosine‑repressible, PLP‑dependent |
| ? | NC_000913 | 4267363 = | 54 (0.940) | coding (250/1194 nt) | tyrB | tyrosine aminotransferase, tyrosine‑repressible, PLP‑dependent | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGAAGACGGAATTATTCCACAACTGCAAGCCGTGGCGGAGGCGGAAGCGCGCCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTA > NC_000913/4267227‑4267501 | cGAAGACGGAATTATTCCACAACTGCAAGCCGTGGCGGAGGCGGAAGCGCGCCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGttt > 1:570501/1‑139 (MQ=255) aaGACGGAATTATTCCACAACTGCAAGCCGTGGCGGAGGCGGAAGCGCGCCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTgg > 2:980669/1‑139 (MQ=255) aaGACGGAATTATTCCACAACTGCAAGCCGTGGCGGAGGCGGAAGCGCGCCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTgg > 2:1318169/1‑139 (MQ=255) aaGACGGAATTATTCCACAACTGCAAGCCGTGGCGGAGGCGGAAGCGCGCCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTgg > 2:385370/1‑139 (MQ=255) aaGACGGAATTATTCCACAACTGCAAGCCGTGGCGGAGGCGGAAGCGCGCCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTgg > 1:1104662/1‑139 (MQ=255) aaGACGGAATTATTCCACAACTGCAAGCCGTGGCGGAGGCGGAAGCGCGCCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTgg > 1:313355/1‑139 (MQ=255) aaGACGGAATTATTCCACAACTGCAAGCCGTGGCGGAGGCGGAAGCGCGCCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGATATCGCCATGCAATTGAGCCGCTGCTGTTTgg > 1:725419/1‑139 (MQ=255) aGACGGAATTATTCCACAACTGCAAGCCGTGGCGGAGGCGGAAGCGCGCCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGt < 1:517612/139‑1 (MQ=255) attCCACAACTGCAAGCCGTGGCGGAGGCGGAAGCGCGCCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATc < 2:411490/139‑1 (MQ=255) cacaACTGCAAGCCGTGGCGGAGGCGGAAGCGCGCCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGt < 1:851445/139‑1 (MQ=255) aaCTGCAAGCCGTGGCGGAGGCGGAAGCGCGCCTGAATTCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACt > 1:1082234/1‑139 (MQ=255) cAAGCCGTGGCGGAGGCGGAAGCGCGCCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAaac > 1:332011/1‑139 (MQ=255) aGCCGTGGCGGAGGCGGAAGCGCGCCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAaacaa > 2:169265/1‑139 (MQ=255) aGCCGTGGCGGAGGCGGAAGCGCGCCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAaacaa > 1:574445/1‑139 (MQ=255) gTGGCGGAGGCGGAAGCGCGCCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAgc < 1:1046367/139‑1 (MQ=255) tGGCGGAGGCGGAAGCGCGCCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAgcg < 2:313355/139‑1 (MQ=255) cggaggcggaAGCGCGCCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGt < 2:570501/139‑1 (MQ=255) gcggaAGCGCGCCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCaa < 1:911802/139‑1 (MQ=255) cggaAGCGCGCCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGTTGGAAGGGCTTAACTGCTAGCGCCATTCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAAc < 1:621868/139‑1 (MQ=255) cggaAGCGCGCCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAAc < 1:208777/139‑1 (MQ=255) cgcgcCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCa < 2:526981/139‑1 (MQ=255) aTGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTgg < 2:397192/139‑1 (MQ=255) tGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTggc < 2:1082234/139‑1 (MQ=255) tGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTggc < 1:169265/139‑1 (MQ=255) cATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCgggg < 2:502965/139‑1 (MQ=255) cttcgcttTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCg < 1:167891/71‑1 (MQ=255) cttcgcttTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCg > 2:167891/1‑71 (MQ=255) tcgcttTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAg < 2:54475/139‑1 (MQ=255) tcgcttTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAg > 2:818289/1‑139 (MQ=255) ttatttaCCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGgc < 2:574445/139‑1 (MQ=255) aCCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGAt > 1:944041/1‑139 (MQ=255) cGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGt > 1:926123/1‑48 (MQ=255) cGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGt < 2:926123/48‑1 (MQ=255) gATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCC‑‑‑GCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGgc < 2:864414/127‑1 (MQ=255) gATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCC‑‑‑GCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGgc > 1:864414/1‑127 (MQ=255) tGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCt > 1:60624/1‑139 (MQ=255) tGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCC‑‑‑GCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGaa > 2:907107/1‑139 (MQ=255) gAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGa > 2:91864/1‑139 (MQ=255) gAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGa > 2:605380/1‑139 (MQ=255) tAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGAAACGCTAc > 1:1307195/1‑139 (MQ=255) cTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGAAACGCTACTTc < 1:605380/139‑1 (MQ=255) cTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGAAACGCTACTTc < 1:1066226/139‑1 (MQ=255) gCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGAAACGCTACTTccc < 2:307001/139‑1 (MQ=255) aTCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGAAACGCTACTTCCCGGa > 2:838707/1‑139 (MQ=255) gccatgccatTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGAAACGCTACTTCCCGGAATc < 1:1138767/139‑1 (MQ=255) gccatTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCg > 2:227827/1‑139 (MQ=255) gccatTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCg > 1:1067957/1‑139 (MQ=255) ccatTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGt < 1:818289/139‑1 (MQ=255) catTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTc < 2:766018/139‑1 (MQ=255) tGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCgg < 2:918685/81‑1 (MQ=255) tGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCgg > 1:918685/1‑81 (MQ=255) tGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTgg > 2:965081/1‑139 (MQ=255) tGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTgg < 2:332011/139‑1 (MQ=255) gccgcTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTc < 2:1104662/139‑1 (MQ=255) gcgccgcTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCa < 1:907107/138‑1 (MQ=255) ccgcTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCgg < 2:795081/97‑1 (MQ=255) ccgcTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCgg > 1:795081/1‑97 (MQ=255) tgctgTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGC‑ACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGAt < 1:385370/139‑1 (MQ=255) ctgTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATc < 1:1318169/139‑1 (MQ=255) tttGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTa < 1:227827/139‑1 (MQ=255) | CGAAGACGGAATTATTCCACAACTGCAAGCCGTGGCGGAGGCGGAAGCGCGCCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTA > NC_000913/4267227‑4267501 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |