| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,418,135 | T→C | *1035Q (TAA→CAA) | acrF → | multidrug efflux system protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,418,135 | 0 | T | C | 100.0% | 385.4 / NA | 102 | *1035Q (TAA→CAA) | acrF | multidrug efflux system protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (54/48); total (54/48) | |||||||||||
Only 100 of 102 total aligned reads displayed.
CGGTGCCGGCAGTGGCGCGCAGAACGCTGTGGGTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGATAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCACTCTTTAAAAGCTTTCTATAGTTCCCGCTCCCTTCACTATTTTTA > NC_000913/3418008‑3418264 | cGGTGCCGGCAGTGGCGCGCAGAACGCTGTGGGTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAg < 2:1187462/135‑1 (MQ=255)cGGTGCCGGCAGTGGCGCGCAGAACGCTGTGGGTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAg > 1:1187462/1‑135 (MQ=255)cGGTGCCGGCAGTGGCGCGCAGAACGCTGTGGGTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAAc > 2:948192/1‑139 (MQ=255) tGCCGGCAGTGGCGCGCAGAACGCTGTGGGTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGa < 2:885109/133‑1 (MQ=255) tGCCGGCAGTGGCGCGCAGAACGCTGTGGGTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGa > 1:885109/1‑133 (MQ=255) tGCCGGCAGTGGCGCGCAGAACGCTGTGGGTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATa > 1:349276/1‑139 (MQ=255) ccGGCAGTGGCGCGCAGAACGCTGTGGGTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATaaa > 2:9032/1‑139 (MQ=255) ggCAGTGGCGCGCAGAACGCTGTGGGTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAgg > 1:49092/1‑139 (MQ=255) ggCAGTGGCGCGCAGAACGCTGTGGGTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAgg > 2:1127383/1‑139 (MQ=255) ggCAGTGGCGCGCAGAACGCTGTGGGTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAgg > 1:392691/1‑139 (MQ=255) cgcAGAACGCTGTGGGTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCggg > 1:1153432/1‑139 (MQ=255) cgcAGAACGCTGTGGGTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCggg < 2:391539/139‑1 (MQ=255) cgcAGAACGCTGTGGGTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTGGTGGTGATCCGCCGTTGCGTTAAAGGACAAATCAGAAACACAAAGGCGCTTTCggg < 1:916883/139‑1 (MQ=255) aGAACGCTGTGGGTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGc < 1:509027/139‑1 (MQ=255) aaCGCTGTGGGTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCt < 1:632801/139‑1 (MQ=255) aaCGCTGTGGGTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCt > 2:925202/1‑139 (MQ=255) aaCGCTGTGGGTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCt > 2:632801/1‑139 (MQ=255) gggTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTattatt < 2:670717/139‑1 (MQ=255) aTCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTACGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCa > 2:1111012/1‑139 (MQ=255) cGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCggg < 2:139779/120‑1 (MQ=255) cGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCggg > 1:139779/1‑120 (MQ=255) ggTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCggg > 2:368949/1‑117 (MQ=255) ggTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCggg < 1:368949/117‑1 (MQ=255) ggTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGaa > 2:1006060/1‑139 (MQ=255) tGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCggg < 1:175195/112‑1 (MQ=255) tGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCggg > 2:175195/1‑112 (MQ=255) gggAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCAt < 2:392691/139‑1 (MQ=255) gggAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCAt < 1:174515/139‑1 (MQ=255) ggaATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCt > 1:737185/1‑112 (MQ=255) ggaATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCt < 2:737185/112‑1 (MQ=255) tGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATta > 2:283377/1‑139 (MQ=255) tGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATta > 2:51727/1‑139 (MQ=255) ggTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATtaa < 2:1153432/139‑1 (MQ=255) tctcTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATtaata < 2:161604/139‑1 (MQ=255) tctcTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATtaata < 1:815517/139‑1 (MQ=255) cGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCggg > 2:854297/1‑91 (MQ=255) cGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCggg < 1:854297/91‑1 (MQ=255) tGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCggg > 2:249590/1‑88 (MQ=255) tGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCggg < 1:249590/88‑1 (MQ=255) tGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGc > 1:298724/1‑91 (MQ=255) tGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGc < 2:298724/91‑1 (MQ=255) cTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGgcgc < 1:1099792/79‑1 (MQ=255) cTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGgcgc > 2:1099792/1‑79 (MQ=255) cTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCggg < 2:112053/86‑1 (MQ=255) cTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCggg > 1:112053/1‑86 (MQ=255) cTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATtaata < 2:1131202/125‑1 (MQ=255) cTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATtaata > 1:1131202/1‑125 (MQ=255) tGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCt < 1:283377/139‑1 (MQ=255) tGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCt < 1:925202/139‑1 (MQ=255) tGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCt < 1:1127383/139‑1 (MQ=255) gCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCa < 1:51727/139‑1 (MQ=255) tcttctTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATC‑GAAACATAAAGGCGCTTTCggg < 2:796173/78‑1 (MQ=255) tcttctTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATC‑GAAACATAAAGGCGCTTTCggg > 1:796173/1‑78 (MQ=255) cttcGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCACTCTTTaa < 1:537764/139‑1 (MQ=255) cGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAg < 1:18196/61‑1 (MQ=255) cGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAg > 2:18196/1‑61 (MQ=255) cGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCACTCTTTAAAAg < 1:719413/139‑1 (MQ=255) aCCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCACTCTTTAAAAGCtt > 2:507536/1‑139 (MQ=255) cGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATaaa > 2:1225357/1‑98 (MQ=255) cGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATaaa < 1:1225357/98‑1 (MQ=255) gtgtTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCggg < 1:192244/65‑1 (MQ=255) gtgtTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCggg > 2:192244/1‑65 (MQ=255) gtgtTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCgg > 2:323262/1‑64 (MQ=255) gtgtTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCgg < 1:323262/64‑1 (MQ=255) gtgtTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGa < 2:806390/107‑1 (MQ=255) gtgtTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGa > 1:806390/1‑107 (MQ=255) gtgtTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCACTCTTTAAAAGCTTTCta > 1:1011756/1‑139 (MQ=255) gtgtTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAACTAATAAGATATTCTTCTGCTCACTCTTTAAAAGCTTTCta > 1:830629/1‑139 (MQ=255) tgtTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTtattat < 1:450106/76‑1 (MQ=255) tgtTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTtattat > 2:450106/1‑76 (MQ=255) ttCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCACTCTTTAAAAGCt > 2:706419/1‑131 (MQ=255) ttCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCACTCTTTAAAAGCt < 1:706419/131‑1 (MQ=255) ttCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCACTCTTTAAAAGCTTTCTATAg > 2:648858/1‑139 (MQ=255) ttCTTTGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCACTCTTTAAAAGCTTTCTATAg > 2:1122241/1‑139 (MQ=255) tttGTGGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCACTCTTTAAAAGCtt > 1:962482/1‑129 (MQ=255) tgtgGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCt > 1:776771/1‑62 (MQ=255) tgtgGTGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCt < 2:776771/62‑1 (MQ=255) tgtgGTGATACGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCCTTCGGGTGCCTTTCTTATTTCCCGTGAAACCCATAAAAATTAATAAGATCTTCTTCTGCTAACTCTTTACAAGATTTCTATAGTTcct > 1:599320/1‑138 (MQ=255) tgtgGCGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAg > 2:799051/1‑46 (MQ=255) tgtgGCGATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAg < 1:799051/46‑1 (MQ=255) ggtgATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCACTCTTTaa > 2:431556/1‑118 (MQ=255) ggtgATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCACTCTTTaa < 1:431556/118‑1 (MQ=255) ggtgATCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCACTCTTTAAAAGCTTTCTATAGTTCCCGCt > 2:1122272/1‑139 (MQ=255) aTCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCACTCTTTAAAAGCTTTCTATAGTTc > 1:1202954/1‑130 (MQ=255) aTCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCACTCTTTAAAAGCTTTCTATAGTTc < 2:1202954/130‑1 (MQ=255) aTCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCACTCTTTAAAAGCTTTCTATAGTTCCCg > 2:465924/1‑133 (MQ=255) aTCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCACTCTTTAAAAGCTTTCTATAGTTCCCg < 1:465924/133‑1 (MQ=255) aTCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCACTCTTTAAAAGCTTTCTATAGTTCCCGCTCCCt > 1:1306232/1‑139 (MQ=255) tCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTc < 2:449280/64‑1 (MQ=255) tCCGCCGTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTc > 1:449280/1‑64 (MQ=255) cgccgTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCACTCTTTAAAAGCTTTCTATAGTTCCCGCTCCCTTCa > 1:803431/1‑139 (MQ=255) ccgTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCt > 2:419357/1‑99 (MQ=255) ccgTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCt < 1:419357/99‑1 (MQ=255) ccgTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCACTCTTTAAAAGCTTTCTATAGTTCCCGCTCCCTTCACt > 1:219864/1‑139 (MQ=255) ccgTTGCTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCACTCTTTAAAAGCTTTCTATAGTTCCCGCTCCCTTCACt > 2:1125017/1‑139 (MQ=255) cTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATtaa < 1:119526/76‑1 (MQ=255) cTTTAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATtaa > 2:119526/1‑76 (MQ=255) tttAAAGGACAAATCAGAAACATAAAGGCGCTTTCggg > 1:133151/1‑38 (MQ=255) tttAAAGGACAAATCAGAAACATAAAGGCGCTTTCggg < 2:133151/38‑1 (MQ=255) tttAAAGGACAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCACTCTTTAAAAGCTTTCTATAGTTCCCGCTCCCTTCACTATTTTTa < 2:238861/139‑1 (MQ=255) | CGGTGCCGGCAGTGGCGCGCAGAACGCTGTGGGTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGATAAATCAGAAACATAAAGGCGCTTTCGGGTGCCTTTATTATTTCCAGTGAAACCCATAAAAATTAATAAGATATTCTTCTGCTCACTCTTTAAAAGCTTTCTATAGTTCCCGCTCCCTTCACTATTTTTA > NC_000913/3418008‑3418264 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |