| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,516,213 | G→A | A365V (GCG→GTG) | damX ← | cell division protein that binds to the septal ring |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,516,213 | 0 | G | A | 98.0% | 167.9 / ‑5.2 | 49 | A365V (GCG→GTG) | damX | cell division protein that binds to the septal ring |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (24/24); minor base C (0/1); total (24/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
ACATCTGCTGGCAATGTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCGCCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTGCCGATTTCAACGAACCAACATTACCTGCGGTCTTCGCCCCAGCAGCGGGTGTTGCTGTGGT > NC_000913/3516078‑3516340 | aCATCTGCTGGCAATGTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCAccc < 1:59683/139‑1 (MQ=255)aCATCTGCTGGCAATGTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCAccc < 1:1163250/139‑1 (MQ=255) cATCTGCTGGCAATGTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCa < 1:551869/139‑1 (MQ=255) ggCAATGTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCa > 2:1031646/1‑139 (MQ=255) cAATGTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAgg < 1:282073/139‑1 (MQ=255) cAATGTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAgg < 1:711100/139‑1 (MQ=255) tGTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTg > 2:1289977/1‑139 (MQ=255) gTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGt < 2:629704/139‑1 (MQ=255) gCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACAACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTag > 1:485392/1‑139 (MQ=255) cTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTaga > 2:279494/1‑139 (MQ=255) cTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTaga > 1:268731/1‑139 (MQ=255) cTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTaga > 2:564665/1‑139 (MQ=255) cTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGGTaga > 1:259647/1‑139 (MQ=255) ccTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCt < 1:387503/139‑1 (MQ=255) gCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAgg < 1:959368/102‑1 (MQ=255) gCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAgg > 2:959368/1‑102 (MQ=255) gCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAgtgt > 1:320886/1‑139 (MQ=255) gCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAgtgt > 2:917977/1‑139 (MQ=255) cAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGa < 2:268731/139‑1 (MQ=255) gAAGCCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATCGACAACGTAGTTTTTCAGATTCTCTTTCTTCCCCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACg < 1:856002/139‑1 (MQ=255) aCCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTg < 1:1289977/139‑1 (MQ=255) cAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTGcc < 2:320886/139‑1 (MQ=255) tACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTGCCGATTTCa < 1:917977/139‑1 (MQ=255) aCCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTGCCGATTTCaa > 1:821353/1‑139 (MQ=255) cGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTGCCGATTTCAACGaa < 2:485392/139‑1 (MQ=255) ggCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTGCCGATTTCAACGaa < 1:140216/138‑1 (MQ=255) ggCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTGCCGATTTCAACGaa > 2:140216/1‑138 (MQ=255) gCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTGCCGATTTCAACGAAcc < 1:20155/139‑1 (MQ=255) aCCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCAccc > 1:654487/1‑56 (MQ=255) aCCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCAccc < 2:654487/56‑1 (MQ=255) aCCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTGCCGATTTCAGCGAACCAACa > 1:50803/1‑139 (MQ=255) aCCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTGCCGATTTCAACGAACCAACa > 2:679586/1‑139 (MQ=255) cgtTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTGCCGATTTCAACGAACCAACATTACCTGCGGTc > 1:347067/1‑139 (MQ=255) ttCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTGCCGATTTCAACGAACCAACATTACCTGCGGTCTTc > 2:523797/1‑139 (MQ=255) aCAACGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTGCCGATTTCAACGAACCAACATTACCTGCGGTCTTCGCCCcag > 1:866586/1‑139 (MQ=255) cGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGt < 1:2985/45‑1 (MQ=255) cGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGt > 2:2985/1‑45 (MQ=255) cGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTGCCGATTTCAACGAAc < 2:249367/108‑1 (MQ=255) cGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTGCCGATTTCAACGAAc > 1:249367/1‑108 (MQ=255) cGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTGCCGATTTCAACGAACCAACATTACCTGCGGTCTTCGCCCCagcagc < 1:1031646/139‑1 (MQ=255) cGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTGCCGATTTCAACGAACCAACATTACCTGCGGTCTTCGCCCCagcagc > 1:584433/1‑139 (MQ=255) cGTAGTTTTTCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTGCCGATTTCAACGAACCAACATTACCTGCGGTCTTCGCCCCagcagc > 1:631090/1‑139 (MQ=255) tttttCAGATTCTCTTTCTTCACCCTACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTGCCGATTTCAACGGACCAACAGTACCTGCGGTCTTCGCCCCAGCAGCGGgtg < 1:1159194/139‑1 (MQ=255) tttttCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTGCCGATTTCAACGAACCAACATTACCTGCGGTCTTCGCCCCAGCAGCGGgtg < 2:671439/139‑1 (MQ=255) tttttCAGATTCTCTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTGCCGATTTCAACGAACCAACATTACCTGCGGTCTTCGCCCCAGCAGCGGgtg < 1:679586/139‑1 (MQ=255) tctcTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAgg > 1:942305/1‑42 (MQ=255) tctcTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAgg < 2:942305/42‑1 (MQ=255) tctcTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAg > 2:856083/1‑52 (MQ=255) tctcTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAg < 1:856083/52‑1 (MQ=255) tctcTTTCTTCACCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTGCCGATTTCAACGAACCAACATTACCTGCGGTCTTCGCCCCAGCAGCGGGTGTTGCTGTGGt < 1:279494/139‑1 (MQ=255) | ACATCTGCTGGCAATGTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCGCCCAACCGTTCAGGTTGTCGTAGTTAGAGGAACTGCTCAGCTGCAGAGTGTAATGGCTGGACGGTGCCGATTTCAACGAACCAACATTACCTGCGGTCTTCGCCCCAGCAGCGGGTGTTGCTGTGGT > NC_000913/3516078‑3516340 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |