| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,306,934 | A→G | intergenic (‑180/+38) | mqo ← / ← yojI | malate dehydrogenase, FAD/NAD(P)‑binding domain/microcin J25 efflux ABC transporter permease/ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,306,934 | 0 | A | G | 100.0% | 108.1 / NA | 29 | intergenic (‑180/+38) | mqo/yojI | malate dehydrogenase, FAD/NAD(P)‑binding domain/microcin J25 efflux ABC transporter permease/ATPase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (18/11); total (18/11) | |||||||||||
TGTTTATAAATTATATTCTAATTTTAGAAACATTATAATTTCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCGCATTTCCAGCAGGCGG > NC_000913/2306843‑2307065 | tGTTTATAAATTATATTCTAATTTTAGAAACATTATAATTTCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGGCCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTc > 2:450306/1‑139 (MQ=255) tttATAAATTATATTCTAATTTTAGAAACATTATAATTTCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGGCCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCg > 2:301403/1‑139 (MQ=255) atatTCTAATTTTAGAAACATTATAATTTCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGGCCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCa > 1:160356/1‑139 (MQ=255) cATTATAATTTCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGGCCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATcg < 1:301403/139‑1 (MQ=255) tataATTTCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGGCCTGACGGcagcag > 2:553734/1‑73 (MQ=255) tataATTTCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGGCCTGACGGcagcag < 1:553734/73‑1 (MQ=255) cGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGGCCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCAcgcg > 2:73699/1‑117 (MQ=255) cGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGGCCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCAcgcg < 1:73699/117‑1 (MQ=255) tattaGAAATGAAGGGATTTTTAGCATATTGGCCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGc > 2:569576/1‑139 (MQ=255) attaGAAATGAAGGGATTTTTAGCATATTGGCCTGACGgc < 1:285535/40‑1 (MQ=255) attaGAAATGAAGGGATTTTTAGCATATTGGCCTGACGgc > 2:285535/1‑40 (MQ=38) attaGAAATGAAGGGATTTTTAGCATATTGGCCTGACGGcagcag > 1:459410/1‑45 (MQ=255) attaGAAATGAAGGGATTTTTAGCATATTGGCCTGACGGcagcag < 2:459410/45‑1 (MQ=255) attaGAAATGAAGGGATTTTTAGCATATTGGCCTGACGGCAGCAGTCCGCCAGGTCAGcg < 1:133336/60‑1 (MQ=255) attaGAAATGAAGGGATTTTTAGCATATTGGCCTGACGGCAGCAGTCCGCCAGGTCAGcg > 2:133336/1‑60 (MQ=255) attaGAAATGAAGGGATTTTTAGCATATTGGCCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCg < 2:209315/80‑1 (MQ=255) attaGAAATGAAGGGATTTTTAGCATATTGGCCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCg > 1:209315/1‑80 (MQ=255) attaGAAATGAAGGGATTTTTAGCATATTGGCCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGcc > 2:210794/1‑139 (MQ=255) attaGAAATGAAGGGATTTTTAGCATATTGGCCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGcc > 2:238755/1‑139 (MQ=255) attaGAAATGAAGGGATTTTTAGCATATTGGCCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGcc > 2:57960/1‑139 (MQ=255) attaGAAATGAAGGGATTTTTAGCATATTGGCCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGcc > 2:61241/1‑139 (MQ=255) attaGAAATGAAGGGATTTTTAGCATATTGGCCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGcc > 1:393049/1‑139 (MQ=255) ttaGAAATGAAGGGATTTTTAGCATATTGGCCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAat > 2:235161/1‑66 (MQ=255) ttaGAAATGAAGGGATTTTTAGCATATTGGCCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAat < 1:235161/66‑1 (MQ=255) aaTGAAGGGATTTTTAGCATATTGGCCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTgc > 1:54422/1‑139 (MQ=255) aTGAAGGGATTTTTAGCATATTGGCCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTgcg < 1:238755/139‑1 (MQ=255) aaGGGATTTTTAGCATATTGGCCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCt < 2:258423/121‑1 (MQ=255) aaGGGATTTTTAGCATATTGGCCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCt > 1:258423/1‑121 (MQ=255) cATATTGGCCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCGCATTTCCAGCAGGCgg < 1:57960/139‑1 (MQ=255) | TGTTTATAAATTATATTCTAATTTTAGAAACATTATAATTTCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCGCATTTCCAGCAGGCGG > NC_000913/2306843‑2307065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |