| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,347,929 | T→C | V272A (GTC→GCC) | yhbJ → | adaptor protein for GlmZ/GlmY sRNA decay, glucosamine‑6‑phosphate‑regulated, NTPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,347,929 | 0 | T | C | 100.0% | 104.8 / NA | 28 | V272A (GTC→GCC) | yhbJ | adaptor protein for GlmZ/GlmY sRNA decay, glucosamine‑6‑phosphate‑regulated, NTPase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (17/11); total (17/11) | |||||||||||
CTATGGTTACCTATGCTGGAAACCAACAACCGTAGCTACTTGACGGTCGCCATTGGTTGTACCGGCGGGAAGCACCGTTCGGTGTATATTGCAGAGCAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGTCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCTGGGCATGCATGCCCGGCCTGCAATGAAGCTGTTTGAATTAATGCA > NC_000913/3347796‑3348048 | cTATGGTTACCTATGCTGGAAACCAACAACCGTAGCTACTTGACGGTCGCCATTGGTTGTACCGGCGGGAAGCACCGTTCGGTGTATATTGCAGAGCAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGCCCAGt > 1:140479/1‑139 (MQ=255) ttGACGGTCGCCATTGGTTGTACCGGCGGGAAGCACCGTTCGGTGTATATTGCAGAGCAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGt > 1:430717/1‑139 (MQ=255) ttGACGGTCGCCATTGGTTGTACCGGCGGGAAGCACCGTTCGGTGTATATTGCAGAGCAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGt > 1:365230/1‑139 (MQ=255) gTCGCCATTGGTTGTACCGGCGGGAAGCACCGTTCGGTGTATATTGCAGAGCAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCa > 1:178727/1‑139 (MQ=255) ggTTGTACCGGCGGGAAGCACCGTTCGGTGTATATTGCAGAGCAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGa < 1:203405/139‑1 (MQ=255) aCCGGCGGGAAGCACCGTTCGGTGTATATTGCAGAGCAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATcac > 2:396339/1‑139 (MQ=255) ggcggGAAGCACCGTTCGGTGTATATTGCAGAGCAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCacaaa < 2:430717/139‑1 (MQ=255) ggcggGAAGCACCGTTCGGTGTATATTGCAGAGCAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCacaaa < 2:365230/139‑1 (MQ=255) gtgtATATTGCAGAGCAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAATCTGGGCatgcatgc < 2:140479/139‑1 (MQ=255) tgtATATTGCAGAGCAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCTGGGCATGCATGcc < 2:178727/139‑1 (MQ=255) atTGCAGAGCAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCTGGGCATGCATGCCCGGcc > 2:240391/1‑139 (MQ=255) agagCAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGc > 2:327138/1‑62 (MQ=255) agagCAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGc < 1:327138/62‑1 (MQ=255) agagCAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCTGGGCATGCATGCCCGGCCTGCaa > 2:295839/1‑139 (MQ=255) agCAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGCCCAGTCACg < 1:215330/49‑1 (MQ=255) agCAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGCCCAGTCACg > 2:215330/1‑49 (MQ=255) agCAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCTGGGCATGCATGCCCGGCCTGCAATg > 1:202214/1‑139 (MQ=255) agCAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCTGGGCATGCATGCCCGGCCTGCAATg > 1:104769/1‑139 (MQ=255) agCAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCTGGGCATGCATGCCCGGCCTGCAATg > 2:242881/1‑139 (MQ=255) cAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACCAACAAGCTGGGCATGCATGCCCGGCCTGCAATGaa > 2:151095/1‑139 (MQ=255) cAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCTGGGCATGCATGCCCGGCCTGCAATGaa > 2:314854/1‑139 (MQ=255) aaCTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCTGGGCATGCATGCCCGGCCTGCAATGAAg < 1:295839/139‑1 (MQ=255) aGACTACTTCCGCTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCTGGGCATGCATGCCCGGCCTGCAATGAAGCTGTTTg > 1:307974/1‑139 (MQ=255) actTCCGCTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCTGGGCATGCATGCCCGGCCTGCAATGAAGCTGTTTGAATTa > 1:90723/1‑139 (MQ=255) cGCTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCTGGGCATGCATGCCCGGCCTGCAATGAAGCTGTTTGAATTAATGCa < 1:240391/139‑1 (MQ=255) cTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAg < 1:578363/90‑1 (MQ=255) cTCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAg > 2:578363/1‑90 (MQ=255) tCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCTGGGCATGCATGCCCGGCCTGCAATGAAGCTGTTTGaa > 1:647906/1‑128 (MQ=255) tCGCGCGGTAAAAACGCCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCTGGGCATGCATGCCCGGCCTGCAATGAAGCTGTTTGaa < 2:647906/128‑1 (MQ=255) | CTATGGTTACCTATGCTGGAAACCAACAACCGTAGCTACTTGACGGTCGCCATTGGTTGTACCGGCGGGAAGCACCGTTCGGTGTATATTGCAGAGCAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGTCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCTGGGCATGCATGCCCGGCCTGCAATGAAGCTGTTTGAATTAATGCA > NC_000913/3347796‑3348048 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |