| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,607,418 | C→T | A323V (GCC→GTC) | zntA → | zinc, cobalt and lead efflux system |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,607,418 | 0 | C | T | 100.0% | 96.5 / NA | 29 | A323V (GCC→GTC) | zntA | zinc, cobalt and lead efflux system |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (16/13); total (16/13) | |||||||||||
TTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAATCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGCCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAAGAGCGTCGCGCTCCCATTGAGCGGTTTATCGACCGTTTCAGCCGTATCTATACGCCCGCGATTATGGCCGTCGCTCTGCTGGTGACG > NC_000913/3607286‑3607548 | ttGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAATCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGCCGTTGGAAGTGCTGTCAGAACCGGGAGTCAgcgc > 1:362523/1‑139 (MQ=255) ttGATGAAAGCGCCCTGACCGGCGAATCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCATTGACCg < 1:178145/139‑1 (MQ=255) aGCGCCCTGACCGGCGAATCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCATTGACCGGATTCTGa > 2:364428/1‑139 (MQ=255) cgcCCTGACCGGCGAATCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCATTGACCGGATTCTGaaa < 1:350261/139‑1 (MQ=255) gACCGGCGAATCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCATTGACCGGATTCTGAAACTGATc > 2:493755/1‑139 (MQ=255) tGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCAt < 1:94173/97‑1 (MQ=255) tGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCAt > 2:94173/1‑97 (MQ=255) cgcgcAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAAGAGCGTCGCGCTc > 2:571403/1‑139 (MQ=255) cAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAAGAGCGTcgcg < 1:277936/132‑1 (MQ=255) cAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAAGAGCGTcgcg > 2:277936/1‑132 (MQ=255) cAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAAGAGCGTCGCGCTCCCAt > 1:281376/1‑139 (MQ=255) ggCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAAGAGCGTCGCGCTCCCATTGAGc < 2:20564/139‑1 (MQ=255) gATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAAGAGCGTCGCGCTCCCATTGAGCGGt < 1:571403/139‑1 (MQ=255) tAGACCGTCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAAGAGCGTCGCGCTCCCATTGAGCGGTTTATCGACCGTTTCAGCCGTATCTATAc > 1:571970/1‑139 (MQ=255) tCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAAGAGCGTCGCGCTCCCATTGAGCGGTTTATCGa < 1:468877/111‑1 (MQ=255) tCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAAGAGCGTCGCGCTCCCATTGAGCGGTTTATCGa > 2:468877/1‑111 (MQ=255) tCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAAGAGCGTCGCGCTCCCATTGAGCGGTTTATCGACCGTTTCAg > 2:489608/1‑120 (MQ=255) tCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAAGAGCGTCGCGCTCCCATTGAGCGGTTTATCGACCGTTTCAg < 1:489608/120‑1 (MQ=255) tCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAAGAGCGTCGCGCTCCCATTGAGCGGTTTATCGACCGTTTCAGCCGTATCTATACGccc > 2:435335/1‑136 (MQ=255) tCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAAGAGCGTCGCGCTCCCATTGAGCGGTTTATCGACCGTTTCAGCCGTATCTATACGCCcgcg > 2:539863/1‑139 (MQ=255) tCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAACAGCGTCGCGCTCCCATTGAGCGGTTTATCGACCGTTTCAGCCGTATCTATACGccc < 1:435335/136‑1 (MQ=255) cTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCATTGACCGGATTCTGAAACTGATCgaag > 1:424608/1‑70 (MQ=255) cTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCATTGACCGGATTCTGAAACTGATCgaag < 2:424608/70‑1 (MQ=255) cGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAAGAGCGTCGCGCTCCCATTGAGCGGTTTATCGACCGTTTCAGCCGt > 1:523735/1‑116 (MQ=255) cGTTGGAAGTGCTGTCAGAACCGGGAGTCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAAGAGCGTCGCGCTCCCATTGAGCGGTTTATCGACCGTTTCAGCCGt < 2:523735/116‑1 (MQ=255) cAGAACCGGGAGTCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAAGAGCGTCGCGCTCCCATTGAGCGGTTTATCGACCGTTTCAGCCGTATCTATACGCCCGCGATTATGGCCGTCGCTCTGCTGGt > 2:283397/1‑139 (MQ=255) aCCGGGAGTCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAAGAGCGTCGCGCTCCCATTGAGCGGTTTATCGACCGTTTCAGCCGTATCTATACGCCCGCGATTATGGCCGTCGCTCTGCTGGTGACg < 1:364428/139‑1 (MQ=255) gAGTCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAAGAGCGTCGCGCTCCCATTGAGCGGTTTATCGa > 1:557761/1‑79 (MQ=255) gAGTCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAAGAGCGTCGCGCTCCCATTGAGCGGTTTATCGa < 2:557761/79‑1 (MQ=255) | TTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAATCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGCCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAAGAGCGTCGCGCTCCCATTGAGCGGTTTATCGACCGTTTCAGCCGTATCTATACGCCCGCGATTATGGCCGTCGCTCTGCTGGTGACG > NC_000913/3607286‑3607548 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |